FFCP PHASE1:Hg19::chr1:110306562..110306582,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79574 | |EntrezGene=79574 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21297 | |HGNC=21297 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TE67 | |UniProt=Q8TE67 | ||
|association_with_transcript=0bp_to_uc001dyq.1,uc001dyr.1,uc001dys.1,uc009wfm.1,uc009wfn.1,uc009wfo.1_5end | |association_with_transcript=0bp_to_uc001dyq.1,uc001dyr.1,uc001dys.1,uc009wfm.1,uc009wfn.1,uc009wfo.1_5end | ||
|cluster_id=chr1:110306562..110306582,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_EPS8L3_5end | |description=CAGE_peak_2_at_EPS8L3_5end | ||
|id=chr1:110306562..110306582,- | |id=chr1:110306562..110306582,- | ||
|ontology_enrichment_celltype=CL:0002150!3.12e-10!3;CL:0000861!3.12e-10!3 | |ontology_enrichment_celltype=CL:0002150!3.12e-10!3;CL:0000861!3.12e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0002563;4.23e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.01e-08,4;CL:0000223,5.93e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.65e-14;13!UBERON:0004161;5.01e-11;11!UBERON:0006242;5.70e-09;1!UBERON:0001045;1.13e-08;1!UBERON:0006595;5.36e-08;86!UBERON:0003104;7.21e-08;31 | |||
|ontology_enrichment_disease=DOID:305!9.99e-12!106;DOID:299!2.39e-09!25;DOID:3119!4.57e-08!14;DOID:3493!7.02e-08!2;DOID:4929!7.51e-08!2;DOID:0050687!3.12e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.99e-08;1!DOID:1357;1.99e-08;1!DOID:299;2.72e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.91e-08,1;DOID:1357,1.91e-08,1;DOID:299,2.67e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.22e-21!35;UBERON:0000160!2.33e-18!27;UBERON:0000059!5.82e-15!11;UBERON:0004921!2.12e-14!129;UBERON:0004185!2.12e-14!129;UBERON:0001007!6.58e-14!155;UBERON:0001555!6.58e-14!155;UBERON:0007026!6.58e-14!155;UBERON:0004119!4.17e-12!169;UBERON:0000925!4.17e-12!169;UBERON:0006595!4.17e-12!169;UBERON:0002294!1.81e-11!7;UBERON:0001173!1.81e-11!7;UBERON:0004912!1.81e-11!7;UBERON:0004907!2.29e-11!5;UBERON:0001155!1.01e-09!9;UBERON:0009497!3.77e-09!25;UBERON:0000015!3.77e-09!25;UBERON:0002423!3.77e-09!25;UBERON:0006235!3.77e-09!25;UBERON:0004161!3.77e-09!25;UBERON:0001052!2.03e-08!4;UBERON:0009854!4.95e-08!23;UBERON:0002394!8.10e-08!4;UBERON:0003928!8.10e-08!4;UBERON:0000077!9.34e-08!130;UBERON:0003929!1.96e-07!54;UBERON:0009856!6.00e-07!26 | |ontology_enrichment_uberon=UBERON:0005409!5.22e-21!35;UBERON:0000160!2.33e-18!27;UBERON:0000059!5.82e-15!11;UBERON:0004921!2.12e-14!129;UBERON:0004185!2.12e-14!129;UBERON:0001007!6.58e-14!155;UBERON:0001555!6.58e-14!155;UBERON:0007026!6.58e-14!155;UBERON:0004119!4.17e-12!169;UBERON:0000925!4.17e-12!169;UBERON:0006595!4.17e-12!169;UBERON:0002294!1.81e-11!7;UBERON:0001173!1.81e-11!7;UBERON:0004912!1.81e-11!7;UBERON:0004907!2.29e-11!5;UBERON:0001155!1.01e-09!9;UBERON:0009497!3.77e-09!25;UBERON:0000015!3.77e-09!25;UBERON:0002423!3.77e-09!25;UBERON:0006235!3.77e-09!25;UBERON:0004161!3.77e-09!25;UBERON:0001052!2.03e-08!4;UBERON:0009854!4.95e-08!23;UBERON:0002394!8.10e-08!4;UBERON:0003928!8.10e-08!4;UBERON:0000077!9.34e-08!130;UBERON:0003929!1.96e-07!54;UBERON:0009856!6.00e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.40e-52;22!UBERON:0000160;1.39e-48;17!UBERON:0000059;1.33e-32;11!UBERON:0004921;6.35e-31;33!UBERON:0004907;1.27e-23;5!UBERON:0001155;7.92e-21;9!UBERON:0001052;4.61e-17;4!UBERON:0002108;1.55e-14;4!UBERON:0001555;2.39e-11;54!UBERON:0001007;2.59e-11;81!UBERON:0001154;1.13e-08;1!UBERON:0001153;1.13e-08;1!UBERON:0009854;1.13e-08;1!UBERON:0001764;1.99e-08;1!UBERON:0001825;1.99e-08;1!UBERON:0001242;4.23e-08;4!UBERON:0001262;4.23e-08;4!UBERON:0004786;4.23e-08;4!UBERON:0004808;4.23e-08;4!UBERON:0001277;4.23e-08;4!UBERON:0002423;3.19e-07;25!UBERON:0000945;8.05e-07;5!UBERON:0010039;8.05e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.29e-48,17;UBERON:0005409,2.78e-46,25;UBERON:0000059,1.24e-32,11;UBERON:0004907,1.16e-23,5;UBERON:0004921,3.43e-21,118;UBERON:0001155,7.76e-21,9;UBERON:0001007,1.42e-18,145;UBERON:0001555,1.42e-18,145;UBERON:0007026,1.42e-18,145;UBERON:0001052,4.01e-17,4;UBERON:0004119,1.73e-16,160;UBERON:0000925,1.73e-16,160;UBERON:0006595,1.73e-16,160;UBERON:0002108,1.55e-14,4;UBERON:0011216,1.48e-10,223;UBERON:0001046,1.94e-09,19;UBERON:0001154,1.22e-08,1;UBERON:0001153,1.22e-08,1;UBERON:0001045,1.22e-08,1;UBERON:0001764,1.91e-08,1;UBERON:0001825,1.91e-08,1;UBERON:0001242,4.01e-08,4;UBERON:0001262,4.01e-08,4;UBERON:0004786,4.01e-08,4;UBERON:0004808,4.01e-08,4;UBERON:0001277,4.01e-08,4;UBERON:0009854,8.37e-08,23;UBERON:0003929,1.48e-07,54;UBERON:0009497,3.19e-07,25;UBERON:0000015,3.19e-07,25;UBERON:0002423,3.19e-07,25;UBERON:0006235,3.19e-07,25;UBERON:0004161,3.19e-07,25;UBERON:0009856,7.03e-07,26 | |||
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| ||
|short_description=p2@EPS8L3 | |short_description=p2@EPS8L3 | ||
}} | }} |
Latest revision as of 22:57, 15 September 2015
Short description: | p2@EPS8L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPS8L3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_uc001dyq.1, uc001dyr.1, uc001dys.1, uc009wfm.1, uc009wfn.1, uc009wfo.1_5end |
EntrezGene: | EPS8L3 |
HGNC: | 21297 |
UniProt: | Q8TE67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.01e-08 | 4 |
endodermal cell | 5.93e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.29e-48 | 17 |
gastrointestinal system | 2.78e-46 | 25 |
large intestine | 1.24e-32 | 11 |
lower digestive tract | 1.16e-23 | 5 |
subdivision of digestive tract | 3.43e-21 | 118 |
colon | 7.76e-21 | 9 |
digestive system | 1.42e-18 | 145 |
digestive tract | 1.42e-18 | 145 |
primitive gut | 1.42e-18 | 145 |
rectum | 4.01e-17 | 4 |
endoderm-derived structure | 1.73e-16 | 160 |
endoderm | 1.73e-16 | 160 |
presumptive endoderm | 1.73e-16 | 160 |
small intestine | 1.55e-14 | 4 |
organ system subdivision | 1.48e-10 | 223 |
hindgut | 1.94e-09 | 19 |
vermiform appendix | 1.22e-08 | 1 |
caecum | 1.22e-08 | 1 |
midgut | 1.22e-08 | 1 |
maxillary sinus | 1.91e-08 | 1 |
paranasal sinus | 1.91e-08 | 1 |
intestinal mucosa | 4.01e-08 | 4 |
wall of intestine | 4.01e-08 | 4 |
gastrointestinal system mucosa | 4.01e-08 | 4 |
gastrointestinal system epithelium | 4.01e-08 | 4 |
intestinal epithelium | 4.01e-08 | 4 |
digestive tract diverticulum | 8.37e-08 | 23 |
gut epithelium | 1.48e-07 | 54 |
epithelium of foregut-midgut junction | 3.19e-07 | 25 |
anatomical boundary | 3.19e-07 | 25 |
hepatobiliary system | 3.19e-07 | 25 |
foregut-midgut junction | 3.19e-07 | 25 |
septum transversum | 3.19e-07 | 25 |
sac | 7.03e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.91e-08 | 1 |
maxillary sinus cancer | 1.91e-08 | 1 |
adenocarcinoma | 2.67e-07 | 25 |