FFCP PHASE1:Hg19::chr10:104155455..104155479,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:104155455..104155479,+ to FFCP PHASE1:Hg19::chr10:104155455..104155479,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4791 | |EntrezGene=4791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7795 | |HGNC=7795 | ||
|TSSclassifier=strong | |||
|UniProt=Q00653 | |UniProt=Q00653 | ||
|association_with_transcript=0bp_to_ENST00000189444,ENST00000467116_5end | |||
|cluster_id=chr10:104155455..104155479,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_NFKB2_5end | |||
|id=chr10:104155455..104155479,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.62e-24!140;CL:0002057!2.55e-23!42;CL:0000860!3.21e-23!45;CL:0000766!4.55e-20!76;CL:0002087!1.47e-18!119;CL:0002009!1.18e-17!65;CL:0002031!1.27e-17!124;CL:0000557!7.38e-17!71;CL:0002194!1.24e-16!63;CL:0000576!1.24e-16!63;CL:0000040!1.24e-16!63;CL:0000559!1.24e-16!63;CL:0000012!4.68e-15!682;CL:0000839!8.97e-15!70;CL:0000548!1.53e-14!679;CL:0000004!1.53e-14!679;CL:0000255!1.53e-14!679;CL:0000003!2.30e-14!722;CL:0000988!1.29e-11!182;CL:0000063!5.85e-11!578;CL:0000037!8.47e-11!172;CL:0000566!8.47e-11!172;CL:0000144!1.59e-10!625;CL:0002032!2.58e-10!165;CL:0000837!2.58e-10!165;CL:0002371!3.22e-09!591;CL:0000359!2.06e-08!32;CL:0000763!3.56e-07!112;CL:0000049!3.56e-07!112;CL:0000945!8.41e-07!24;CL:0000826!8.41e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-19;33!CL:0002057;1.46e-19;33!CL:0000473;6.05e-15;39!CL:0000234;6.05e-15;39!CL:0000576;1.90e-11;48!CL:0000766;1.67e-09;69!CL:0000359;5.41e-08;32!CL:0000945;8.06e-07;24!CL:0002087;9.45e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.48e-24,136;CL:0000860,2.55e-23,42;CL:0002057,2.55e-23,42;CL:0000473,1.55e-21,48;CL:0000234,1.55e-21,48;CL:0000766,1.03e-19,72;CL:0002087,4.52e-18,115;CL:0002009,2.51e-17,61;CL:0002031,3.95e-17,120;CL:0000557,1.75e-16,67;CL:0002194,2.68e-16,59;CL:0000576,2.68e-16,59;CL:0000040,2.68e-16,59;CL:0000559,2.68e-16,59;CL:0000839,2.24e-14,66;CL:0000988,2.91e-11,177;CL:0000037,2.45e-10,168;CL:0002032,7.26e-10,161;CL:0000837,7.26e-10,161;CL:0000359,2.06e-08,32;CL:0000945,8.41e-07,24;CL:0000826,8.41e-07,24;CL:0000763,9.11e-07,108;CL:0000049,9.11e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.91e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.59e-18!102;UBERON:0003061!7.59e-18!102;UBERON:0003081!9.31e-18!216;UBERON:0002193!1.21e-17!112;UBERON:0002371!1.58e-14!80;UBERON:0001474!2.36e-12!86;UBERON:0000926!2.80e-12!448;UBERON:0004120!2.80e-12!448;UBERON:0006603!2.80e-12!448;UBERON:0002204!3.83e-11!167;UBERON:0002405!4.83e-11!115;UBERON:0004765!2.57e-10!101;UBERON:0001434!2.57e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-17,98;UBERON:0003061,2.20e-17,98;UBERON:0002193,3.63e-17,108;UBERON:0003081,7.45e-15,203;UBERON:0002371,4.23e-14,76;UBERON:0002405,6.43e-14,93;UBERON:0001474,6.61e-12,82;UBERON:0004765,1.18e-11,90;UBERON:0002204,1.72e-10,167;UBERON:0000926,1.89e-10,315;UBERON:0004120,1.89e-10,315;UBERON:0006603,1.89e-10,315;UBERON:0001434,1.08e-09,100 | |||
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| ||
|short_description=p1@NFKB2 | |||
}} | }} |
Latest revision as of 00:51, 16 September 2015
Short description: | p1@NFKB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFKB2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000189444, ENST00000467116_5end |
EntrezGene: | NFKB2 |
HGNC: | 7795 |
UniProt: | Q00653 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.48e-24 | 136 |
classical monocyte | 2.55e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.55e-23 | 42 |
defensive cell | 1.55e-21 | 48 |
phagocyte | 1.55e-21 | 48 |
myeloid leukocyte | 1.03e-19 | 72 |
nongranular leukocyte | 4.52e-18 | 115 |
macrophage dendritic cell progenitor | 2.51e-17 | 61 |
hematopoietic lineage restricted progenitor cell | 3.95e-17 | 120 |
granulocyte monocyte progenitor cell | 1.75e-16 | 67 |
monopoietic cell | 2.68e-16 | 59 |
monocyte | 2.68e-16 | 59 |
monoblast | 2.68e-16 | 59 |
promonocyte | 2.68e-16 | 59 |
myeloid lineage restricted progenitor cell | 2.24e-14 | 66 |
hematopoietic cell | 2.91e-11 | 177 |
hematopoietic stem cell | 2.45e-10 | 168 |
hematopoietic oligopotent progenitor cell | 7.26e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.26e-10 | 161 |
vascular associated smooth muscle cell | 2.06e-08 | 32 |
lymphocyte of B lineage | 8.41e-07 | 24 |
pro-B cell | 8.41e-07 | 24 |
myeloid cell | 9.11e-07 | 108 |
common myeloid progenitor | 9.11e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.20e-17 | 98 |
blood island | 2.20e-17 | 98 |
hemolymphoid system | 3.63e-17 | 108 |
lateral plate mesoderm | 7.45e-15 | 203 |
bone marrow | 4.23e-14 | 76 |
immune system | 6.43e-14 | 93 |
bone element | 6.61e-12 | 82 |
skeletal element | 1.18e-11 | 90 |
musculoskeletal system | 1.72e-10 | 167 |
mesoderm | 1.89e-10 | 315 |
mesoderm-derived structure | 1.89e-10 | 315 |
presumptive mesoderm | 1.89e-10 | 315 |
skeletal system | 1.08e-09 | 100 |