FFCP PHASE1:Hg19::chr4:15005391..15005489,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:15005391..15005489,+ to FFCP PHASE1:Hg19::chr4:15005391..15005489,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=132864 | |EntrezGene=132864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21745 | |HGNC=21745 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5Q1 | |UniProt=Q7Z5Q1 | ||
|association_with_transcript=-32bp_to_ENST00000345451,ENST00000507071,uc003gni.1,uc003gnj.1,uc003gnk.1,uc003gnl.1,uc003gnm.1,uc003gnn.1_5end | |||
|cluster_id=chr4:15005391..15005489,+ | |||
|description=CAGE_peak_2_at_CPEB2_5end | |||
|id=chr4:15005391..15005489,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.27e-10!42;CL:0000766!1.73e-09!76;CL:0000860!2.00e-09!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.83e-11,42;CL:0002057,9.83e-11,42;CL:0000766,1.11e-10,72;CL:0000473,1.08e-07,48;CL:0000234,1.08e-07,48;CL:0000557,3.15e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;8.03e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-42!115;UBERON:0001049!7.61e-25!57;UBERON:0005068!7.61e-25!57;UBERON:0006241!7.61e-25!57;UBERON:0007135!7.61e-25!57;UBERON:0002616!4.49e-23!59;UBERON:0003080!8.30e-20!42;UBERON:0000073!2.87e-19!94;UBERON:0001016!2.87e-19!94;UBERON:0001017!2.89e-19!82;UBERON:0002780!3.07e-19!41;UBERON:0001890!3.07e-19!41;UBERON:0006240!3.07e-19!41;UBERON:0005743!9.27e-19!86;UBERON:0000955!1.36e-18!69;UBERON:0006238!1.36e-18!69;UBERON:0001893!3.87e-16!34;UBERON:0002020!4.27e-16!34;UBERON:0003528!4.27e-16!34;UBERON:0002346!1.03e-15!90;UBERON:0002791!1.46e-15!33;UBERON:0003075!1.51e-15!86;UBERON:0007284!1.51e-15!86;UBERON:0001869!4.58e-15!32;UBERON:0002619!2.25e-13!22;UBERON:0000924!9.12e-13!173;UBERON:0006601!9.12e-13!173;UBERON:0004121!1.79e-12!169;UBERON:0003056!1.81e-12!61;UBERON:0001950!3.29e-12!20;UBERON:0000153!4.52e-12!129;UBERON:0007811!4.52e-12!129;UBERON:0000033!4.59e-12!123;UBERON:0000956!1.48e-11!25;UBERON:0000203!1.48e-11!25;UBERON:0000480!1.15e-09!626;UBERON:0000467!2.10e-09!625;UBERON:0000468!1.89e-08!659;UBERON:0000062!4.20e-08!511;UBERON:0002050!1.19e-07!605;UBERON:0005423!1.19e-07!605;UBERON:0000923!1.23e-07!604;UBERON:0005291!1.23e-07!604;UBERON:0006598!1.23e-07!604;UBERON:0002532!1.23e-07!604;UBERON:0000922!1.41e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.52e-14;41!UBERON:0001890;2.52e-14;41!UBERON:0002619;1.16e-13;22!UBERON:0001893;1.55e-13;34!UBERON:0003528;1.60e-13;34!UBERON:0002020;1.60e-13;34!UBERON:0001869;1.79e-13;32!UBERON:0002791;1.92e-13;32!UBERON:0000073;4.16e-13;53!UBERON:0002616;4.16e-13;53!UBERON:0001950;1.78e-12;20!UBERON:0000956;2.22e-11;25!UBERON:0000203;2.22e-11;25!UBERON:0007023;2.48e-11;114!UBERON:0001017;3.21e-09;75!UBERON:0000955;1.71e-08;68!UBERON:0001016;3.23e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.09e-42,114;UBERON:0001049,2.10e-24,56;UBERON:0005068,2.10e-24,56;UBERON:0006241,2.10e-24,56;UBERON:0007135,2.10e-24,56;UBERON:0000073,6.03e-23,53;UBERON:0002616,6.03e-23,53;UBERON:0002780,2.60e-19,41;UBERON:0001890,2.60e-19,41;UBERON:0003080,2.60e-19,41;UBERON:0006240,2.60e-19,41;UBERON:0001016,5.27e-19,89;UBERON:0001017,1.21e-18,81;UBERON:0000955,4.79e-18,68;UBERON:0006238,4.79e-18,68;UBERON:0002346,1.04e-17,86;UBERON:0003075,1.60e-17,82;UBERON:0007284,1.60e-17,82;UBERON:0001893,3.56e-16,34;UBERON:0003528,3.94e-16,34;UBERON:0002020,3.94e-16,34;UBERON:0001869,4.34e-15,32;UBERON:0002791,5.67e-15,32;UBERON:0010371,1.31e-13,104;UBERON:0004121,1.58e-13,171;UBERON:0000924,1.58e-13,171;UBERON:0006601,1.58e-13,171;UBERON:0002619,1.61e-13,22;UBERON:0003056,1.10e-12,61;UBERON:0001950,2.43e-12,20;UBERON:0000956,1.53e-11,25;UBERON:0000203,1.53e-11,25;UBERON:0010314,3.22e-10,132;UBERON:0002050,3.58e-10,564;UBERON:0000923,4.15e-10,560;UBERON:0010316,4.15e-10,560;UBERON:0005291,4.15e-10,560;UBERON:0006598,4.15e-10,560;UBERON:0010317,4.15e-10,560;UBERON:0002532,4.15e-10,560;UBERON:0005423,2.13e-08,581;UBERON:0000922,2.56e-08,592;UBERON:0011216,3.10e-07,223;UBERON:0002390,4.62e-07,98;UBERON:0003061,4.62e-07,98 | |||
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| ||
|short_description=p2@CPEB2 | |||
}} | }} |
Latest revision as of 01:06, 16 September 2015
Short description: | p2@CPEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CPEB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000345451, ENST00000507071, uc003gni.1, uc003gnj.1, uc003gnk.1, uc003gnl.1, uc003gnm.1, uc003gnn.1_5end |
EntrezGene: | CPEB2 |
HGNC: | 21745 |
UniProt: | Q7Z5Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.83e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.83e-11 | 42 |
myeloid leukocyte | 1.11e-10 | 72 |
defensive cell | 1.08e-07 | 48 |
phagocyte | 1.08e-07 | 48 |
granulocyte monocyte progenitor cell | 3.15e-07 | 67 |