FFCP PHASE1:Hg19::chr10:104486253..104486266,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:104486253..104486266,+
|short_description=p4@SFXN2
|description=CAGE_peak_4_at_SFXN2_5end
|association_with_transcript=-127bp_to_DQ892856,DQ896103_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118980 | |EntrezGene=118980 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16086 | |HGNC=16086 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-127bp_to_DQ892856,DQ896103_5end | |||
|cluster_id=chr10:104486253..104486266,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_4_at_SFXN2_5end | |||
|id=chr10:104486253..104486266,+ | |||
|ontology_enrichment_celltype=CL:0002619!5.96e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0000235;8.03e-43;6!CL:0002619;9.21e-39;3!CL:0000473;3.95e-07;39!CL:0000234;3.95e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.15e-42,6;CL:0002619,8.37e-39,3;CL:0002194,3.80e-12,59;CL:0000576,3.80e-12,59;CL:0000040,3.80e-12,59;CL:0000559,3.80e-12,59;CL:0002009,9.12e-12,61;CL:0000839,6.51e-11,66;CL:0000557,9.32e-11,67;CL:0000766,4.84e-10,72;CL:0000763,8.33e-07,108;CL:0000049,8.33e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.73e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.44e-35!115;UBERON:0001049!4.17e-11!57;UBERON:0005068!4.17e-11!57;UBERON:0006241!4.17e-11!57;UBERON:0007135!4.17e-11!57;UBERON:0001893!6.66e-11!34;UBERON:0001869!1.43e-09!32;UBERON:0002791!3.00e-09!33;UBERON:0002616!4.05e-09!59;UBERON:0002020!8.46e-09!34;UBERON:0003528!8.46e-09!34;UBERON:0002780!1.05e-08!41;UBERON:0001890!1.05e-08!41;UBERON:0006240!1.05e-08!41;UBERON:0003080!1.88e-08!42;UBERON:0003075!2.14e-08!86;UBERON:0007284!2.14e-08!86;UBERON:0002346!7.31e-08!90;UBERON:0000955!3.06e-07!69;UBERON:0006238!3.06e-07!69;UBERON:0005743!3.62e-07!86;UBERON:0002619!4.81e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.73e-29;1!UBERON:0001874;2.73e-29;1!UBERON:0002081;2.21e-15;2!UBERON:0004151;1.04e-10;3!UBERON:0005383;1.04e-10;3!UBERON:0005382;1.04e-10;3!UBERON:0000369;2.35e-08;4!UBERON:0002435;2.35e-08;4!UBERON:0000204;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.78e-29,1;UBERON:0001874,2.37e-29,1;UBERON:0002081,1.78e-15,2;UBERON:0010227,1.78e-15,2;UBERON:0004151,8.99e-11,3;UBERON:0005383,9.90e-11,3;UBERON:0005382,9.90e-11,3;UBERON:0002371,1.55e-09,76;UBERON:0001474,7.26e-09,82;UBERON:0000369,2.26e-08,4;UBERON:0002435,2.26e-08,4;UBERON:0000204,2.26e-08,4;UBERON:0010082,2.26e-08,4;UBERON:0004765,4.15e-08,90;UBERON:0002405,7.40e-08,93;UBERON:0002390,1.80e-07,98;UBERON:0003061,1.80e-07,98;UBERON:0001434,2.50e-07,100;UBERON:0002193,8.33e-07,108 | |||
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| ||
|short_description=p4@SFXN2 | |||
}} | }} |
Latest revision as of 02:06, 16 September 2015
Short description: | p4@SFXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SFXN2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -127bp_to_DQ892856, DQ896103_5end |
EntrezGene: | SFXN2 |
HGNC: | 16086 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.15e-42 | 6 |
adult endothelial progenitor cell | 8.37e-39 | 3 |
monopoietic cell | 3.80e-12 | 59 |
monocyte | 3.80e-12 | 59 |
monoblast | 3.80e-12 | 59 |
promonocyte | 3.80e-12 | 59 |
macrophage dendritic cell progenitor | 9.12e-12 | 61 |
myeloid lineage restricted progenitor cell | 6.51e-11 | 66 |
granulocyte monocyte progenitor cell | 9.32e-11 | 67 |
myeloid leukocyte | 4.84e-10 | 72 |
myeloid cell | 8.33e-07 | 108 |
common myeloid progenitor | 8.33e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.78e-29 | 1 |
putamen | 2.37e-29 | 1 |
cardiac atrium | 1.78e-15 | 2 |
future cardiac atrium | 1.78e-15 | 2 |
cardiac chamber | 8.99e-11 | 3 |
caudate-putamen | 9.90e-11 | 3 |
dorsal striatum | 9.90e-11 | 3 |
bone marrow | 1.55e-09 | 76 |
bone element | 7.26e-09 | 82 |
corpus striatum | 2.26e-08 | 4 |
striatum | 2.26e-08 | 4 |
ventral part of telencephalon | 2.26e-08 | 4 |
future corpus striatum | 2.26e-08 | 4 |
skeletal element | 4.15e-08 | 90 |
immune system | 7.40e-08 | 93 |
hematopoietic system | 1.80e-07 | 98 |
blood island | 1.80e-07 | 98 |
skeletal system | 2.50e-07 | 100 |
hemolymphoid system | 8.33e-07 | 108 |