FFCP PHASE1:Hg19::chr11:118826999..118827014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7379 | |EntrezGene=7379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12579 | |HGNC=12579 | ||
|TSSclassifier=strong | |||
|UniProt=O00526 | |UniProt=O00526 | ||
|association_with_transcript=0bp_to_NM_006760_5end | |association_with_transcript=0bp_to_NM_006760_5end | ||
|cluster_id=chr11:118826999..118827014,+ | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_1_at_UPK2_5end | |description=CAGE_peak_1_at_UPK2_5end | ||
|id=chr11:118826999..118827014,+ | |id=chr11:118826999..118827014,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.68e-29!43;CL:0000066!2.07e-26!254;CL:0000223!2.28e-22!59;CL:0002251!9.93e-15!21;CL:0002368!6.33e-12!13;CL:0002202!9.72e-09!9;CL:0002632!9.72e-09!9 | |ontology_enrichment_celltype=CL:0002076!4.68e-29!43;CL:0000066!2.07e-26!254;CL:0000223!2.28e-22!59;CL:0002251!9.93e-15!21;CL:0002368!6.33e-12!13;CL:0002202!9.72e-09!9;CL:0002632!9.72e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.66e-20;42!CL:0002251;3.12e-15;20!CL:0002202;3.86e-10;9!CL:0002632;3.86e-10;9!CL:0000349;1.27e-09;19!CL:0002368;1.28e-08;13!CL:0002621;1.10e-07;3!CL:0002577;5.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.40e-27,42;CL:0000066,3.96e-22,253;CL:0000223,3.55e-21,58;CL:0002251,4.19e-15,20;CL:0002202,3.69e-10,9;CL:0002632,3.69e-10,9;CL:0000349,1.42e-09,19;CL:0002368,1.15e-08,13;CL:0002621,1.20e-07,3;CL:0002577,5.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.56e-11;58 | |||
|ontology_enrichment_disease=DOID:305!4.87e-18!106;DOID:1749!6.30e-12!14;DOID:0050687!7.65e-12!143;DOID:299!2.92e-10!25;DOID:5093!7.40e-07!4;DOID:1612!7.40e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.87e-13;14!DOID:5093;8.10e-10;4!DOID:1612;8.10e-10;4!DOID:299;1.29e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.04e-13,106;DOID:1749,4.94e-13,14;DOID:5093,8.21e-10,4;DOID:1612,8.21e-10,4;DOID:0050687,1.42e-09,143;DOID:7,6.57e-08,39;DOID:299,1.31e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.79e-21!169;UBERON:0000925!5.79e-21!169;UBERON:0006595!5.79e-21!169;UBERON:0001004!1.72e-17!72;UBERON:0000077!1.26e-16!130;UBERON:0001007!8.35e-16!155;UBERON:0001555!8.35e-16!155;UBERON:0007026!8.35e-16!155;UBERON:0004921!8.03e-14!129;UBERON:0004185!8.03e-14!129;UBERON:0000065!1.51e-13!53;UBERON:0000161!2.80e-13!35;UBERON:0005631!1.28e-12!14;UBERON:0000158!1.28e-12!14;UBERON:0000072!2.94e-10!46;UBERON:0000344!7.90e-10!12;UBERON:0003124!1.48e-09!7;UBERON:0001041!2.73e-09!98;UBERON:0000464!2.81e-09!104;UBERON:0001008!5.17e-09!45;UBERON:0005153!5.42e-09!37;UBERON:0005911!6.00e-09!82;UBERON:0008947!6.37e-09!38;UBERON:0003258!6.37e-09!38;UBERON:0005178!6.74e-09!34;UBERON:0002224!6.74e-09!34;UBERON:0005181!1.69e-08!35;UBERON:0000064!2.93e-08!219;UBERON:0006554!3.28e-08!44;UBERON:0000166!5.99e-08!21;UBERON:0000466!1.04e-07!126;UBERON:0007196!1.47e-07!14;UBERON:0001558!1.47e-07!14;UBERON:0003064!1.78e-07!37;UBERON:0000915!1.95e-07!52;UBERON:0004807!2.12e-07!28;UBERON:0000974!2.39e-07!10;UBERON:0000478!2.56e-07!24;UBERON:0001046!4.06e-07!19;UBERON:0003729!6.37e-07!5;UBERON:0000162!7.78e-07!14;UBERON:0001353!7.78e-07!14;UBERON:0000163!7.78e-07!14;UBERON:0006866!7.78e-07!14;UBERON:0000164!7.78e-07!14;UBERON:0000931!7.78e-07!14;UBERON:0005177!8.14e-07!107;UBERON:0003975!8.24e-07!22;UBERON:0005156!8.74e-07!59;UBERON:0000990!8.74e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;8.63e-13;20!UBERON:0000974;1.22e-11;6!UBERON:0000478;1.07e-10;24!UBERON:0005631;3.87e-10;10!UBERON:0000158;3.87e-10;10!UBERON:0003350;8.27e-10;8!UBERON:0004807;1.68e-09;22!UBERON:0003729;2.57e-09;13!UBERON:0005911;3.87e-09;36!UBERON:0001987;7.08e-09;4!UBERON:0003343;1.47e-08;4!UBERON:0004785;1.47e-08;4!UBERON:0003929;3.41e-08;7!UBERON:0002294;3.71e-08;7!UBERON:0001173;3.71e-08;7!UBERON:0001949;1.10e-07;3!UBERON:0000077;1.27e-07;27!UBERON:0000305;1.50e-07;7!UBERON:0000485;1.91e-07;7!UBERON:0000161;2.16e-07;19!UBERON:0000166;2.16e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.31e-17,14;UBERON:0000158,8.31e-17,14;UBERON:0004119,9.42e-15,160;UBERON:0000925,9.42e-15,160;UBERON:0006595,9.42e-15,160;UBERON:0000161,4.69e-13,36;UBERON:0001008,7.06e-13,48;UBERON:0000344,9.90e-13,20;UBERON:0001007,9.60e-12,145;UBERON:0001555,9.60e-12,145;UBERON:0007026,9.60e-12,145;UBERON:0006554,1.13e-11,47;UBERON:0003124,3.74e-11,7;UBERON:0004923,4.74e-11,66;UBERON:0000478,1.16e-10,24;UBERON:0003350,8.49e-10,8;UBERON:0003729,3.49e-09,13;UBERON:0005911,5.23e-09,82;UBERON:0001987,6.94e-09,4;UBERON:0004340,6.94e-09,4;UBERON:0003343,1.74e-08,4;UBERON:0004785,1.74e-08,4;UBERON:0003975,2.84e-08,22;UBERON:0001046,3.08e-08,19;UBERON:0004921,3.76e-08,118;UBERON:0001949,1.20e-07,3;UBERON:0000166,1.66e-07,22;UBERON:0000305,1.69e-07,7;UBERON:0005177,2.12e-07,101;UBERON:0000162,4.03e-07,14;UBERON:0001353,4.03e-07,14;UBERON:0000163,4.03e-07,14;UBERON:0006866,4.03e-07,14;UBERON:0000164,4.03e-07,14;UBERON:0000931,4.03e-07,14;UBERON:0004175,5.04e-07,25;UBERON:0000077,5.42e-07,29;UBERON:0000995,5.67e-07,21;UBERON:0004807,5.81e-07,28;UBERON:0001004,6.67e-07,74;UBERON:0005153,9.09e-07,37 | |||
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|short_description=p1@UPK2 | |short_description=p1@UPK2 | ||
}} | }} |
Latest revision as of 02:06, 16 September 2015
Short description: | p1@UPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UPK2_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | 0bp_to_NM_006760_5end |
EntrezGene: | UPK2 |
HGNC: | 12579 |
UniProt: | O00526 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.40e-27 | 42 |
epithelial cell | 3.96e-22 | 253 |
endodermal cell | 3.55e-21 | 58 |
epithelial cell of alimentary canal | 4.19e-15 | 20 |
epithelial cell of tracheobronchial tree | 3.69e-10 | 9 |
epithelial cell of lower respiratory tract | 3.69e-10 | 9 |
extraembryonic cell | 1.42e-09 | 19 |
respiratory epithelial cell | 1.15e-08 | 13 |
gingival epithelial cell | 1.20e-07 | 3 |
placental epithelial cell | 5.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.04e-13 | 106 |
squamous cell carcinoma | 4.94e-13 | 14 |
thoracic cancer | 8.21e-10 | 4 |
breast cancer | 8.21e-10 | 4 |
cell type cancer | 1.42e-09 | 143 |
disease of anatomical entity | 6.57e-08 | 39 |
adenocarcinoma | 1.31e-07 | 25 |