FFCP PHASE1:Hg19::chr1:111742823..111742838,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:111742823..111742838,- to FFCP PHASE1:Hg19::chr1:111742823..111742838,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79961 | |EntrezGene=79961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26192 | |HGNC=26192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000488786_5end | |||
|cluster_id=chr1:111742823..111742838,- | |||
|coexpression_cluster_id=C1017 | |||
|description=CAGE_peak_5_at_DENND2D_5end | |||
|id=chr1:111742823..111742838,- | |||
|ontology_enrichment_celltype=CL:0002031!6.48e-51!124;CL:0000738!1.12e-49!140;CL:0002087!2.52e-49!119;CL:0000037!6.00e-40!172;CL:0000566!6.00e-40!172;CL:0002032!9.03e-40!165;CL:0000837!9.03e-40!165;CL:0000557!1.56e-38!71;CL:0000839!6.65e-38!70;CL:0000766!2.60e-37!76;CL:0000988!1.10e-35!182;CL:0002194!3.95e-35!63;CL:0000576!3.95e-35!63;CL:0000040!3.95e-35!63;CL:0000559!3.95e-35!63;CL:0002009!7.08e-35!65;CL:0002057!5.91e-31!42;CL:0000860!8.11e-28!45;CL:0000763!2.02e-25!112;CL:0000049!2.02e-25!112;CL:0000838!2.65e-13!52;CL:0000542!7.76e-13!53;CL:0000051!7.76e-13!53;CL:0000791!9.05e-13!18;CL:0000789!9.05e-13!18;CL:0002420!9.05e-13!18;CL:0002419!9.05e-13!18;CL:0000790!9.05e-13!18;CL:0000084!8.44e-10!25;CL:0000827!8.44e-10!25;CL:0000625!1.55e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.81e-37;39!CL:0000234;4.81e-37;39!CL:0000860;1.35e-34;33!CL:0002057;1.35e-34;33!CL:0000576;5.86e-22;48!CL:0000766;7.06e-21;69!CL:0002087;4.47e-14;104!CL:0000235;1.11e-12;6!CL:0000738;8.93e-12;136!CL:0000763;7.80e-10;100!CL:0000625;2.09e-09;11!CL:0000097;2.66e-09;5!CL:0002619;1.97e-07;3!CL:0000988;5.22e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,6.44e-52,66;CL:0000557,6.31e-51,67;CL:0002031,2.15e-50,120;CL:0002087,7.70e-49,115;CL:0000766,1.93e-48,72;CL:0000738,2.91e-48,136;CL:0002194,1.99e-46,59;CL:0000576,1.99e-46,59;CL:0000040,1.99e-46,59;CL:0000559,1.99e-46,59;CL:0002009,1.76e-44,61;CL:0000473,1.38e-42,48;CL:0000234,1.38e-42,48;CL:0000037,1.31e-36,168;CL:0002032,3.04e-35,161;CL:0000837,3.04e-35,161;CL:0000988,1.00e-33,177;CL:0000860,1.82e-32,42;CL:0002057,1.82e-32,42;CL:0000763,7.71e-29,108;CL:0000049,7.71e-29,108;CL:0000235,1.09e-12,6;CL:0000625,2.11e-09,11;CL:0000097,2.21e-09,5;CL:0002028,2.21e-09,5;CL:0000134,4.23e-08,354;CL:0002320,1.26e-07,361;CL:0002619,1.99e-07,3;CL:0000838,6.08e-07,52;CL:0000542,9.91e-07,53;CL:0000051,9.91e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;5.40e-25;42!CL:0000049;1.66e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.23e-41!102;UBERON:0003061!3.23e-41!102;UBERON:0002193!9.72e-38!112;UBERON:0002371!1.30e-31!80;UBERON:0001474!7.62e-28!86;UBERON:0002405!3.97e-27!115;UBERON:0007023!1.63e-20!115;UBERON:0004765!1.63e-20!101;UBERON:0001434!1.63e-20!101;UBERON:0003081!2.69e-10!216;UBERON:0004177!5.08e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;3.86e-09;5!UBERON:0005057;3.86e-09;5!UBERON:0000178;5.07e-09;15!UBERON:0000179;5.07e-09;15!UBERON:0000463;5.07e-09;15!UBERON:0002390;1.76e-07;32!UBERON:0002106;7.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.95e-59,98;UBERON:0003061,2.95e-59,98;UBERON:0002193,4.24e-56,108;UBERON:0002405,2.77e-47,93;UBERON:0002371,3.55e-43,76;UBERON:0001474,5.91e-39,82;UBERON:0004765,3.30e-34,90;UBERON:0001434,2.36e-29,100;UBERON:0003081,5.60e-21,203;UBERON:0002204,3.62e-12,167;UBERON:0000178,5.83e-09,15;UBERON:0000179,5.83e-09,15;UBERON:0000463,5.83e-09,15;UBERON:0004177,9.06e-09,7;UBERON:0005057,9.06e-09,7;UBERON:0000926,1.22e-07,315;UBERON:0004120,1.22e-07,315;UBERON:0006603,1.22e-07,315;UBERON:0002384,1.95e-07,371;UBERON:0002106,7.92e-07,3;UBERON:0004854,7.92e-07,3;UBERON:0009034,7.92e-07,3;UBERON:0002095,7.92e-07,3;UBERON:0004782,7.92e-07,3;UBERON:0003281,7.92e-07,3;UBERON:0009664,7.92e-07,3;UBERON:0002296,7.92e-07,3;UBERON:0005602,7.92e-07,3;UBERON:0001179,7.92e-07,3;UBERON:0006293,7.92e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.123663742951,28.3247033602313,30.4610723683939,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,0,0.284338464974843,0,2.21598163412751,0.401088894940283,0.434021741431704,31.1242509193495,21.3769819572526,28.0757368721263,1.74477886535478,3.02300754951048,0.242584061187816,6.27558399645349,9.04569353648017,7.12324653058738,6.90461741573161,5.89169625016932,6.3850202069918,11.3766074643084,14.846147722428,13.5426486594342,3.38836211176688,4.63940455098338,3.14612878223118,9.48860066349798,6.73950956859797,1.91801137739712,1.9791078011203,3.19141852194611,0.852449501065388,9.57690487474327,15.3194010666608,6.22822248995575,9.2962006144995,6.25779502104242,4.12658804939722,9.6863920421339,20.2552699793161,7.59509729858123,0.633765858935825,0.850417199860174,0.419317291016752,0.112328631146495,0,0.32145117339416,1.14005097496499,0,0.365328307529268,3.51992488922645,0,0,1.28019066769952,0.400395987036012,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.196709770113833,0.393010762749165,0.411202997999018,3.17654341242288,0.651844533267181,2.8406868344084,1.94826728407911,3.23090324967003,0.294605907474837,0.886135578334485,1.62482318259009,2.68991771423918,3.12142434143708,15.7860388419529,18.5154511916518,16.2289728011629,1.77943875794473,0.802622484269139,4.18142095219907,3.62589896632212,0.383220493601921,2.06176467289578,2.53019692019503,5.41561204350964,3.25541726928209,5.70271226669025,4.66782869141096,5.11946444617674,3.74792179657038,4.2619905367923,0.821127996921047,1.20964045934839,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,10.0609692032952,9.92539502605823,11.0355107230658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1595305478658,17.0823113551644,17.5384771500699,0,0,0,0,0,0,6.89728533054321,13.9116525740897,2.90259361757081,2.73827911492227,4.29224273649692,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.162378064119,11.5519131029389,12.6500363689819,0,0,0,0,0,0,2.35378802386407,1.97030760201927,0.646882724578552,0.641715181398742,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.2942852049117,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.7887322147588,0,0,0,0,3.55213326462519,1.52927441428475,1.13929437434833,6.4322579373603,1.23408681925858,0,3.7802200606668,0,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0,3.32159762183469,0.278406173895242,0,0,0,0,0,3.66270448179735,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.796991953004279,1.65770349318689,0,0,0.123084805461069,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0.185536196323703,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0.219385397153973,0,0,0.0769502585037971,0,0.69169171316418,0,0,0.31900115973192,0.366390373607449,2.13213910407454,3.06579894587209,0.31396051279005,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,1.99052386215701,1.59223616106011,0,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.872901148395775,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.669514372325618,0.268733889946905,0,0,0,0,0,0,10.9228598364862,0.795229689809303,0,0,0,0,0,0.77380195455795,0.121499113316049,0,0.472834243795189,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0.387848869084652,0.39669780522807,0,0,1.17466153824464,0.314408610199332,3.31391244277756,2.97699613087171,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0.455324382702595,1.50794029276486,13.9433124942493,0,0,0.0657727735628491,0,0,0.863424021355654,0.157115589916002,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0,0,0,0,0,0,0,0.694567422971502,0.874238242015829,0,0,0,0.588925401344836,0.891139200981258,0,0,6.86082601252931,5.2855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| ||
|short_description=p5@DENND2D | |||
}} | }} |
Latest revision as of 02:45, 16 September 2015
Short description: | p5@DENND2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DENND2D_5end |
Coexpression cluster: | C1017_CD14_Macrophage_Monocytederived_Mast_Dendritic_B_splenic |
Association with transcript: | 26bp_to_ENST00000488786_5end |
EntrezGene: | DENND2D |
HGNC: | 26192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.95e-59 | 98 |
blood island | 2.95e-59 | 98 |
hemolymphoid system | 4.24e-56 | 108 |
immune system | 2.77e-47 | 93 |
bone marrow | 3.55e-43 | 76 |
bone element | 5.91e-39 | 82 |
skeletal element | 3.30e-34 | 90 |
skeletal system | 2.36e-29 | 100 |
lateral plate mesoderm | 5.60e-21 | 203 |
musculoskeletal system | 3.62e-12 | 167 |
blood | 5.83e-09 | 15 |
haemolymphatic fluid | 5.83e-09 | 15 |
organism substance | 5.83e-09 | 15 |
hemopoietic organ | 9.06e-09 | 7 |
immune organ | 9.06e-09 | 7 |
mesoderm | 1.22e-07 | 315 |
mesoderm-derived structure | 1.22e-07 | 315 |
presumptive mesoderm | 1.22e-07 | 315 |
connective tissue | 1.95e-07 | 371 |
spleen | 7.92e-07 | 3 |
gastrointestinal system mesentery | 7.92e-07 | 3 |
stomach region | 7.92e-07 | 3 |
mesentery | 7.92e-07 | 3 |
gastrointestinal system serosa | 7.92e-07 | 3 |
mesentery of stomach | 7.92e-07 | 3 |
gut mesentery | 7.92e-07 | 3 |
dorsal mesentery | 7.92e-07 | 3 |
dorsal mesogastrium | 7.92e-07 | 3 |
peritoneal cavity | 7.92e-07 | 3 |
spleen primordium | 7.92e-07 | 3 |