FFCP PHASE1:Hg19::chr6:151042126..151042135,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57480 | |EntrezGene=57480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20884 | |HGNC=20884 | ||
|TSSclassifier=strong | |||
|UniProt=F5H346 | |UniProt=F5H346 | ||
|association_with_transcript=57bp_to_ENST00000535018,uc003qnz.2_5end | |association_with_transcript=57bp_to_ENST00000535018,uc003qnz.2_5end | ||
|cluster_id=chr6:151042126..151042135,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_21_at_PLEKHG1_5end | |description=CAGE_peak_21_at_PLEKHG1_5end | ||
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|ontology_enrichment_celltype=CL:0002605!5.99e-07!3 | |ontology_enrichment_celltype=CL:0002605!5.99e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.10e-50;1!UBERON:0003056;8.69e-18;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.10e-50;1!UBERON:0003056;8.69e-18;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p21@PLEKHG1 | |short_description=p21@PLEKHG1 | ||
}} | }} |
Latest revision as of 04:09, 16 September 2015
Short description: | p21@PLEKHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_PLEKHG1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 57bp_to_ENST00000535018, uc003qnz.2_5end |
EntrezGene: | PLEKHG1 |
HGNC: | 20884 |
UniProt: | F5H346 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.99e-50 | 1 |
cranial nerve | 3.99e-50 | 1 |
nerve trunk | 3.99e-50 | 1 |
nerve connecting eye with brain | 3.99e-50 | 1 |
nerve | 3.99e-50 | 1 |
retinal neural layer | 3.99e-50 | 1 |
presumptive neural retina | 3.99e-50 | 1 |
substantia nigra | 6.58e-50 | 1 |
midbrain nucleus | 6.58e-50 | 1 |
regional part of midbrain | 6.58e-50 | 1 |
midbrain | 6.58e-50 | 1 |
presumptive midbrain | 6.58e-50 | 1 |
midbrain neural tube | 6.58e-50 | 1 |
neural tissue | 7.14e-26 | 2 |
multi cell component structure | 7.14e-26 | 2 |
neuron projection bundle | 7.14e-26 | 2 |
layer of retina | 1.13e-13 | 4 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
telencephalic nucleus | 2.35e-08 | 7 |
peripheral nervous system | 8.37e-07 | 8 |
basal ganglion | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nuclear complex of neuraxis | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
aggregate regional part of brain | 8.85e-07 | 9 |
collection of basal ganglia | 8.85e-07 | 9 |
cerebral subcortex | 8.85e-07 | 9 |