FFCP PHASE1:Hg19::chr2:238499725..238499747,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64284 | |EntrezGene=64284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16523 | |HGNC=16523 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0T7 | |UniProt=Q9H0T7 | ||
|association_with_transcript=0bp_to_ENST00000264601,uc002vwz.1,uc002vxa.1,uc002vxb.1_5end | |association_with_transcript=0bp_to_ENST00000264601,uc002vwz.1,uc002vxa.1,uc002vxb.1_5end | ||
|cluster_id=chr2:238499725..238499747,- | |||
|description=CAGE_peak_2_at_RAB17_5end | |description=CAGE_peak_2_at_RAB17_5end | ||
|id=chr2:238499725..238499747,- | |id=chr2:238499725..238499747,- | ||
|ontology_enrichment_celltype=CL:0000066!1.18e-36!254;CL:0000223!9.95e-10!59;CL:0000039!3.13e-08!7;CL:0000586!3.13e-08!7;CL:0000148!1.84e-07!10;CL:0000541!1.84e-07!10;CL:0000147!3.96e-07!14;CL:0002077!6.18e-07!33 | |ontology_enrichment_celltype=CL:0000066!1.18e-36!254;CL:0000223!9.95e-10!59;CL:0000039!3.13e-08!7;CL:0000586!3.13e-08!7;CL:0000148!1.84e-07!10;CL:0000541!1.84e-07!10;CL:0000147!3.96e-07!14;CL:0002077!6.18e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.48e-12;7!CL:0000586;1.48e-12;7!CL:0000148;9.75e-12;10!CL:0000147;1.07e-11;14!CL:0002327;1.74e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.05e-29,253;CL:0000039,1.44e-12,7;CL:0000586,1.44e-12,7;CL:0000148,1.22e-11,10;CL:0000541,1.22e-11,10;CL:0000147,1.34e-11,14;CL:0002327,2.02e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.62e-17;29!UBERON:0001041;8.29e-11;30!UBERON:0006595;7.91e-10;86 | |||
|ontology_enrichment_disease=DOID:305!3.29e-40!106;DOID:0050687!1.98e-33!143;DOID:162!1.42e-17!235;DOID:14566!1.47e-16!239;DOID:1749!5.81e-09!14;DOID:299!4.62e-08!25 | |ontology_enrichment_disease=DOID:305!3.29e-40!106;DOID:0050687!1.98e-33!143;DOID:162!1.42e-17!235;DOID:14566!1.47e-16!239;DOID:1749!5.81e-09!14;DOID:299!4.62e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:305;4.06e-13;106!DOID:299;8.63e-09;25!DOID:0050687;1.92e-08;143!DOID:5093;4.54e-08;4!DOID:1612;4.54e-08;4!DOID:0050615;3.33e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.26e-43,106;DOID:0050687,9.49e-41,143;DOID:162,5.56e-23,235;DOID:14566,4.59e-22,239;DOID:299,8.72e-09,25;DOID:5093,5.16e-08,4;DOID:1612,5.16e-08,4;DOID:0050615,3.47e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.03e-18!129;UBERON:0004185!1.03e-18!129;UBERON:0001007!3.94e-18!155;UBERON:0001555!3.94e-18!155;UBERON:0007026!3.94e-18!155;UBERON:0004119!1.01e-17!169;UBERON:0000925!1.01e-17!169;UBERON:0006595!1.01e-17!169;UBERON:0000077!2.55e-17!130;UBERON:0001041!5.13e-15!98;UBERON:0001048!9.33e-14!168;UBERON:0000466!1.61e-13!126;UBERON:0008947!6.40e-12!38;UBERON:0003258!6.40e-12!38;UBERON:0001004!3.31e-11!72;UBERON:0000065!5.08e-11!53;UBERON:0005911!1.10e-10!82;UBERON:0001737!3.62e-10!9;UBERON:0000464!4.32e-10!104;UBERON:0005153!2.48e-09!37;UBERON:0005177!5.99e-09!107;UBERON:0000072!6.22e-09!46;UBERON:0005157!5.03e-08!51;UBERON:0002530!7.85e-08!59;UBERON:0000062!1.31e-07!511;UBERON:0002365!1.68e-07!31;UBERON:0002330!1.68e-07!31;UBERON:0000063!2.38e-07!97;UBERON:0009569!6.72e-07!113;UBERON:0002048!7.51e-07!22;UBERON:0000117!7.51e-07!22;UBERON:0000171!7.51e-07!22;UBERON:0000170!7.51e-07!22;UBERON:0005597!7.51e-07!22;UBERON:0000118!7.51e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.10e-15;9!UBERON:0001557;1.10e-15;9!UBERON:0000072;1.33e-10;37!UBERON:0000065;4.84e-08;44!UBERON:0002365;1.04e-07;31!UBERON:0002330;1.04e-07;31!UBERON:0001911;1.74e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,8.10e-18,118;UBERON:0001041,4.47e-16,87;UBERON:0001737,9.30e-16,9;UBERON:0001007,1.27e-14,145;UBERON:0001555,1.27e-14,145;UBERON:0007026,1.27e-14,145;UBERON:0008947,3.38e-13,38;UBERON:0003258,3.38e-13,38;UBERON:0004119,4.89e-12,160;UBERON:0000925,4.89e-12,160;UBERON:0006595,4.89e-12,160;UBERON:0001048,4.42e-10,160;UBERON:0000072,9.29e-10,47;UBERON:0001004,6.87e-09,74;UBERON:0005153,7.07e-09,37;UBERON:0000065,1.04e-08,54;UBERON:0002365,5.65e-08,31;UBERON:0002330,5.65e-08,31;UBERON:0001557,6.96e-08,19;UBERON:0005911,1.03e-07,82;UBERON:0007499,1.19e-07,25;UBERON:0005177,1.24e-07,101;UBERON:0001911,2.02e-07,4;UBERON:0005333,2.02e-07,4;UBERON:0008425,2.02e-07,4;UBERON:0005311,2.02e-07,4;UBERON:0009856,3.03e-07,26;UBERON:0011216,5.26e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.7030733015166,13.9560233594486,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.523916301990851,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.975789649036763,0.530119073285941,1.51052125730374,1.14027160516907,2.52320850875628,1.09493207722749,0,0,0,0,0,4.8505788016336,5.90046415273356,2.6511213287183,5.4044046638873,7.62578054323422,3.55905928666645,7.14605933248871,5.88664395376038,4.23221872641029,0,0,0,0,2.53510069643662,27.5191620669735,0.590789906681404,0,0.983907508344908,0,0.439001141634502,0,0.301586917234893,0,0,0,0,0,0,0,0,0,6.3216351836742,6.00940313466411,0,0,0,0,0.16798212819886,0.141775097242386,2.4180801129769,4.65014301622339,4.60059214998253,0,0,0,0.288239906833923,0,1.07946420296687,2.29193055334967,1.17217447210047,0,4.62723717164956,10.812350082381,4.85904935471983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,0.276242966807689,0,0,0,0.902399225814824,0.693138033939733,0,0,0.527758144464379,0,0,0,0,0,0,2.29388645740534,2.49322802678617,0.447749509444357,0,0,0,2.29610251989794,1.30151357865721,2.47298427954533,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11443384277478,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,1.0077309914171,0,0,0,5.39210106883961,3.58042349351218,0,0.0986434056369336,0,0,0,0,0,4.6876996995342,4.023159999825,0,1.0241410345695,3.30529745380596,3.54581522651905,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,1.19832309870889,0.139423744278603,0.307801034015188,0,5.30296980092538,4.93667044253747,5.97560545571044,0,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,2.77495773870551,2.12029607150911,0,0.995261931078505,1.76915129006678,0,0,0,0,0.134802265961354,0,0,0,4.50028623543806,2.67058417487502,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0.853828638089378,0,5.55391162672419,0.195984794828755,4.61413794876134,1.57254001417827,0,0.290268993867255,0.365446585430928,0.410577285266046,0.775912131907355,0,0,0,0,0,2.34661659281764,0.160317640503067,0.640358984218058,0,2.4495370916198,0,0,1.87271237384595,0,1.17847017308398,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,4.65983798109815,3.23011047459617,2.55489160981616,2.83094884187577,0.393709926058995,0,0,0.136203406111576,41.63506545244,23.1066253483353,26.1727412958387,0.674921674654501,1.5476039091159,0,0,1.89133697518076,1.25891011523995,0,0,2.68681276247223,0,0,0,0,0,0,0,0,0,2.37955392192264,7.76726838493837,0,0.129282956361551,0.13223260174269,0,2.11444506695002,1.38823636338003,0.157204305099666,0.414239055347196,0,0,0,4.46838880439127,0,0,0,0,3.61224421375539,0,0,0,1.14681839138014,1.22021956690538,0.124192805882767,0,0.124980407962107,2.27473676312472,23.9790880177773,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.966695013382396,0,0,0,0,0,0,0,6.6476893326227,0.521988583930423,0,3.70435958918134,0.244736704506468,0,9.26404341482917,12.4991908259863,0,2.70079653579281,2.87202149110224,0,0,0,0.138258436151731,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,4.90738592505128,0,0.366857197043358,4.38997531371285,0,0,0.198916222116275,0.0752103283492573,0,1.56302802246618,14.4048681964782,0.163771917510097,3.10497781055795,0.0675375846183947,0,0,0,0,4.38606213485746,0,0,3.19406069098988,0,0,0,1.36597314810779,0.975726071789027,0,0,0,0,2.00929529502746,3.11447925297794,0.39246546425257,0,3.36326595976547,0.913158720509496,0.431855182437243,0,0.428859265059938,0,13.01903964123,0,0,0,0.17071847709395,0,6.88363774112444,0,0,0.423387050190929,0.4582137370881,0,0,5.48091615809182,7.26311728752798,1.5849330247695,0,0,0,0,0,0.795803100645473,0,5.19551977379216,0,8.30295639616704,6.40545512295941,1.31135736302374,9.40634592723046,0,10.3697680724715,0,0,0,0,0,0,0,0.178553938605658,2.82315897372553,2.16651690060754,0,2.2936464170227,0.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| ||
|short_description=p2@RAB17 | |short_description=p2@RAB17 | ||
}} | }} |
Latest revision as of 04:11, 16 September 2015
Short description: | p2@RAB17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB17_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264601, uc002vwz.1, uc002vxa.1, uc002vxb.1_5end |
EntrezGene: | RAB17 |
HGNC: | 16523 |
UniProt: | Q9H0T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.05e-29 | 253 |
germ line cell | 1.44e-12 | 7 |
germ cell | 1.44e-12 | 7 |
melanocyte | 1.22e-11 | 10 |
melanoblast | 1.22e-11 | 10 |
pigment cell | 1.34e-11 | 14 |
mammary gland epithelial cell | 2.02e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 8.10e-18 | 118 |
foregut | 4.47e-16 | 87 |
larynx | 9.30e-16 | 9 |
digestive system | 1.27e-14 | 145 |
digestive tract | 1.27e-14 | 145 |
primitive gut | 1.27e-14 | 145 |
respiratory primordium | 3.38e-13 | 38 |
endoderm of foregut | 3.38e-13 | 38 |
endoderm-derived structure | 4.89e-12 | 160 |
endoderm | 4.89e-12 | 160 |
presumptive endoderm | 4.89e-12 | 160 |
primordium | 4.42e-10 | 160 |
segment of respiratory tract | 9.29e-10 | 47 |
respiratory system | 6.87e-09 | 74 |
epithelial bud | 7.07e-09 | 37 |
respiratory tract | 1.04e-08 | 54 |
exocrine gland | 5.65e-08 | 31 |
exocrine system | 5.65e-08 | 31 |
upper respiratory tract | 6.96e-08 | 19 |
endo-epithelium | 1.03e-07 | 82 |
epithelial sac | 1.19e-07 | 25 |
trunk region element | 1.24e-07 | 101 |
mammary gland | 2.02e-07 | 4 |
mammary bud | 2.02e-07 | 4 |
mammary ridge | 2.02e-07 | 4 |
mammary placode | 2.02e-07 | 4 |
sac | 3.03e-07 | 26 |
organ system subdivision | 5.26e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.26e-43 | 106 |
cell type cancer | 9.49e-41 | 143 |
cancer | 5.56e-23 | 235 |
disease of cellular proliferation | 4.59e-22 | 239 |
adenocarcinoma | 8.72e-09 | 25 |
thoracic cancer | 5.16e-08 | 4 |
breast cancer | 5.16e-08 | 4 |
respiratory system cancer | 3.47e-07 | 16 |