FFCP PHASE1:Hg19::chr3:156392368..156392386,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:156392368..156392386,+ to FFCP PHASE1:Hg19::chr3:156392368..156392386,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25976 | |EntrezGene=25976 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23696 | |HGNC=23696 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003fav.2_5end | |||
|cluster_id=chr3:156392368..156392386,+ | |||
|description=CAGE_peak_2_at_TIPARP_5end | |||
|id=chr3:156392368..156392386,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.36e-26!140;CL:0002057!3.98e-20!42;CL:0000860!2.12e-19!45;CL:0002087!5.98e-18!119;CL:0002031!6.81e-18!124;CL:0000766!1.15e-17!76;CL:0000037!9.15e-16!172;CL:0000566!9.15e-16!172;CL:0000557!2.06e-15!71;CL:0002009!4.79e-14!65;CL:0002032!5.68e-14!165;CL:0000837!5.68e-14!165;CL:0000988!4.05e-13!182;CL:0002194!5.17e-13!63;CL:0000576!5.17e-13!63;CL:0000040!5.17e-13!63;CL:0000559!5.17e-13!63;CL:0000839!9.63e-13!70;CL:0000763!2.25e-09!112;CL:0000049!2.25e-09!112;CL:0000791!5.27e-07!18;CL:0000789!5.27e-07!18;CL:0002420!5.27e-07!18;CL:0002419!5.27e-07!18;CL:0000790!5.27e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.90e-18;33!CL:0002057;2.90e-18;33!CL:0000473;1.82e-13;39!CL:0000234;1.82e-13;39!CL:0000576;1.85e-11;48!CL:0000766;6.73e-09;69!CL:0002087;8.98e-08;104!CL:0000791;5.29e-07;18!CL:0000789;5.29e-07;18!CL:0002419;5.29e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.62e-25,136;CL:0000860,3.98e-20,42;CL:0002057,3.98e-20,42;CL:0000473,3.28e-18,48;CL:0000234,3.28e-18,48;CL:0002087,1.29e-17,115;CL:0002031,1.50e-17,120;CL:0000766,1.81e-17,72;CL:0000037,2.23e-15,168;CL:0000557,3.35e-15,67;CL:0002009,7.71e-14,61;CL:0002032,1.35e-13,161;CL:0000837,1.35e-13,161;CL:0000988,3.16e-13,177;CL:0002194,8.53e-13,59;CL:0000576,8.53e-13,59;CL:0000040,8.53e-13,59;CL:0000559,8.53e-13,59;CL:0000839,1.73e-12,66;CL:0000763,4.79e-09,108;CL:0000049,4.79e-09,108;CL:0000791,5.27e-07,18;CL:0000789,5.27e-07,18;CL:0002420,5.27e-07,18;CL:0002419,5.27e-07,18;CL:0000790,5.27e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-15;42!CL:0000790;5.29e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-16!102;UBERON:0003061!1.15e-16!102;UBERON:0001474!1.84e-13!86;UBERON:0002371!2.04e-13!80;UBERON:0002193!2.54e-12!112;UBERON:0004765!2.37e-10!101;UBERON:0001434!2.37e-10!101;UBERON:0002405!2.54e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.32e-16,98;UBERON:0003061,2.32e-16,98;UBERON:0001474,3.61e-13,82;UBERON:0002371,3.86e-13,76;UBERON:0002193,5.51e-12,108;UBERON:0004765,8.95e-12,90;UBERON:0002405,8.32e-10,93;UBERON:0001434,1.23e-09,100 | |||
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| ||
|short_description=p2@TIPARP | |||
}} | }} |
Latest revision as of 06:23, 16 September 2015
Short description: | p2@TIPARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIPARP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003fav.2_5end |
EntrezGene: | TIPARP |
HGNC: | 23696 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.62e-25 | 136 |
classical monocyte | 3.98e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.98e-20 | 42 |
defensive cell | 3.28e-18 | 48 |
phagocyte | 3.28e-18 | 48 |
nongranular leukocyte | 1.29e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.50e-17 | 120 |
myeloid leukocyte | 1.81e-17 | 72 |
hematopoietic stem cell | 2.23e-15 | 168 |
granulocyte monocyte progenitor cell | 3.35e-15 | 67 |
macrophage dendritic cell progenitor | 7.71e-14 | 61 |
hematopoietic oligopotent progenitor cell | 1.35e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-13 | 161 |
hematopoietic cell | 3.16e-13 | 177 |
monopoietic cell | 8.53e-13 | 59 |
monocyte | 8.53e-13 | 59 |
monoblast | 8.53e-13 | 59 |
promonocyte | 8.53e-13 | 59 |
myeloid lineage restricted progenitor cell | 1.73e-12 | 66 |
myeloid cell | 4.79e-09 | 108 |
common myeloid progenitor | 4.79e-09 | 108 |
mature alpha-beta T cell | 5.27e-07 | 18 |
alpha-beta T cell | 5.27e-07 | 18 |
immature T cell | 5.27e-07 | 18 |
mature T cell | 5.27e-07 | 18 |
immature alpha-beta T cell | 5.27e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.32e-16 | 98 |
blood island | 2.32e-16 | 98 |
bone element | 3.61e-13 | 82 |
bone marrow | 3.86e-13 | 76 |
hemolymphoid system | 5.51e-12 | 108 |
skeletal element | 8.95e-12 | 90 |
immune system | 8.32e-10 | 93 |
skeletal system | 1.23e-09 | 100 |