FFCP PHASE1:Hg19::chr3:156807884..156807897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100498859 | |EntrezGene=100498859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=214bp_to_ENST00000467995,ENST00000471719,ENST00000474477,NR_034008_5end | |association_with_transcript=214bp_to_ENST00000467995,ENST00000471719,ENST00000474477,NR_034008_5end | ||
|cluster_id=chr3:156807884..156807897,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_4_at_LOC100498859_5end | |description=CAGE_peak_4_at_LOC100498859_5end | ||
|id=chr3:156807884..156807897,+ | |id=chr3:156807884..156807897,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.54e-60!42;CL:0000860!2.28e-55!45;CL:0000557!2.18e-43!71;CL:0000738!8.59e-43!140;CL:0000766!8.23e-42!76;CL:0002009!9.06e-40!65;CL:0000763!8.51e-38!112;CL:0000049!8.51e-38!112;CL:0000988!9.61e-38!182;CL:0000839!1.71e-37!70;CL:0000037!4.92e-37!172;CL:0000566!4.92e-37!172;CL:0002194!8.86e-37!63;CL:0000576!8.86e-37!63;CL:0000040!8.86e-37!63;CL:0000559!8.86e-37!63;CL:0002032!3.10e-34!165;CL:0000837!3.10e-34!165;CL:0002031!9.34e-33!124;CL:0002087!2.09e-31!119;CL:0000134!2.30e-14!358;CL:0002320!1.17e-13!365;CL:0000219!1.05e-11!390;CL:0000080!1.45e-09!6;CL:0002393!1.98e-09!9;CL:0002397!1.98e-09!9;CL:0000453!3.91e-09!5;CL:0000048!7.65e-09!430;CL:0000723!1.96e-08!436;CL:0000034!2.27e-08!444;CL:0000451!4.79e-07!10;CL:0000767!6.17e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.54e-60!42;CL:0000860!2.28e-55!45;CL:0000557!2.18e-43!71;CL:0000738!8.59e-43!140;CL:0000766!8.23e-42!76;CL:0002009!9.06e-40!65;CL:0000763!8.51e-38!112;CL:0000049!8.51e-38!112;CL:0000988!9.61e-38!182;CL:0000839!1.71e-37!70;CL:0000037!4.92e-37!172;CL:0000566!4.92e-37!172;CL:0002194!8.86e-37!63;CL:0000576!8.86e-37!63;CL:0000040!8.86e-37!63;CL:0000559!8.86e-37!63;CL:0002032!3.10e-34!165;CL:0000837!3.10e-34!165;CL:0002031!9.34e-33!124;CL:0002087!2.09e-31!119;CL:0000134!2.30e-14!358;CL:0002320!1.17e-13!365;CL:0000219!1.05e-11!390;CL:0000080!1.45e-09!6;CL:0002393!1.98e-09!9;CL:0002397!1.98e-09!9;CL:0000453!3.91e-09!5;CL:0000048!7.65e-09!430;CL:0000723!1.96e-08!436;CL:0000034!2.27e-08!444;CL:0000451!4.79e-07!10;CL:0000767!6.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.10e-97;33!CL:0002057;5.10e-97;33!CL:0000473;9.14e-68;39!CL:0000234;9.14e-68;39!CL:0000576;1.38e-66;48!CL:0000766;2.72e-42;69!CL:0002393;2.36e-25;6!CL:0002397;2.36e-25;6!CL:0000763;3.89e-22;100!CL:0002087;2.51e-15;104!CL:0000767;1.09e-14;3!CL:0000738;3.02e-13;136!CL:0001014;3.34e-10;2!CL:0001016;3.34e-10;2!CL:0000094;2.98e-09;8!CL:0000988;5.28e-08;177!CL:0000081;9.80e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.94e-122,42;CL:0002057,3.94e-122,42;CL:0000473,6.50e-106,48;CL:0000234,6.50e-106,48;CL:0000557,2.77e-91,67;CL:0002009,1.43e-90,61;CL:0000766,1.92e-89,72;CL:0002194,3.35e-83,59;CL:0000576,3.35e-83,59;CL:0000040,3.35e-83,59;CL:0000559,3.35e-83,59;CL:0000839,3.68e-78,66;CL:0000763,3.40e-67,108;CL:0000049,3.40e-67,108;CL:0000738,2.08e-54,136;CL:0002031,4.06e-45,120;CL:0000037,9.95e-45,168;CL:0002032,1.84e-42,161;CL:0000837,1.84e-42,161;CL:0000988,4.89e-42,177;CL:0002087,8.58e-42,115;CL:0000134,7.12e-18,354;CL:0002320,2.34e-17,361;CL:0002393,9.54e-17,9;CL:0002397,9.54e-17,9;CL:0000219,1.54e-15,386;CL:0000767,1.11e-14,3;CL:0000048,2.59e-13,427;CL:0000723,5.25e-13,433;CL:0000034,1.31e-12,441;CL:0001014,3.35e-10,2;CL:0001016,3.35e-10,2;CL:0000094,3.05e-09,8;CL:0000081,9.96e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-89;42!CL:0000049;6.68e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.07e-39!102;UBERON:0003061!7.07e-39!102;UBERON:0002371!7.79e-37!80;UBERON:0002193!7.16e-34!112;UBERON:0001474!3.11e-33!86;UBERON:0002405!1.20e-29!115;UBERON:0004765!3.94e-26!101;UBERON:0001434!3.94e-26!101;UBERON:0003081!1.83e-18!216;UBERON:0002384!1.06e-12!375;UBERON:0002204!7.66e-12!167 | |ontology_enrichment_uberon=UBERON:0002390!7.07e-39!102;UBERON:0003061!7.07e-39!102;UBERON:0002371!7.79e-37!80;UBERON:0002193!7.16e-34!112;UBERON:0001474!3.11e-33!86;UBERON:0002405!1.20e-29!115;UBERON:0004765!3.94e-26!101;UBERON:0001434!3.94e-26!101;UBERON:0003081!1.83e-18!216;UBERON:0002384!1.06e-12!375;UBERON:0002204!7.66e-12!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.13e-79,76;UBERON:0001474,2.49e-73,82;UBERON:0004765,3.58e-66,90;UBERON:0002405,8.41e-64,93;UBERON:0002390,1.77e-63,98;UBERON:0003061,1.77e-63,98;UBERON:0001434,8.12e-59,100;UBERON:0002193,6.68e-57,108;UBERON:0002204,4.28e-32,167;UBERON:0003081,3.31e-28,203;UBERON:0002384,1.18e-16,371;UBERON:0000926,3.39e-15,315;UBERON:0004120,3.39e-15,315;UBERON:0006603,3.39e-15,315 | |||
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| ||
|short_description=p4@LOC100498859 | |short_description=p4@LOC100498859 | ||
}} | }} |
Latest revision as of 06:58, 16 September 2015
Short description: | p4@LOC100498859 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC100498859_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 214bp_to_ENST00000467995, ENST00000471719, ENST00000474477, NR_034008_5end |
EntrezGene: | LOC100498859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.13e-79 | 76 |
bone element | 2.49e-73 | 82 |
skeletal element | 3.58e-66 | 90 |
immune system | 8.41e-64 | 93 |
hematopoietic system | 1.77e-63 | 98 |
blood island | 1.77e-63 | 98 |
skeletal system | 8.12e-59 | 100 |
hemolymphoid system | 6.68e-57 | 108 |
musculoskeletal system | 4.28e-32 | 167 |
lateral plate mesoderm | 3.31e-28 | 203 |
connective tissue | 1.18e-16 | 371 |
mesoderm | 3.39e-15 | 315 |
mesoderm-derived structure | 3.39e-15 | 315 |
presumptive mesoderm | 3.39e-15 | 315 |