FFCP PHASE1:Hg19::chr4:155548151..155548165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9227 | |EntrezGene=9227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6685 | |HGNC=6685 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC94 | |UniProt=D6RC94 | ||
|association_with_transcript=38bp_to_ENST00000502525_5end | |association_with_transcript=38bp_to_ENST00000502525_5end | ||
|cluster_id=chr4:155548151..155548165,+ | |||
|description=CAGE_peak_3_at_LRAT_5end | |description=CAGE_peak_3_at_LRAT_5end | ||
|id=chr4:155548151..155548165,+ | |id=chr4:155548151..155548165,+ | ||
|ontology_enrichment_celltype=CL:0000047!2.42e-07!8;CL:0000540!7.16e-07!6;CL:0000031!7.16e-07!6;CL:0000404!7.16e-07!6 | |ontology_enrichment_celltype=CL:0000047!2.42e-07!8;CL:0000540!7.16e-07!6;CL:0000031!7.16e-07!6;CL:0000404!7.16e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.92e-19;3!UBERON:0003057;7.92e-19;3!UBERON:0010122;3.95e-08;2!UBERON:0006601;3.94e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.14e-36!115;UBERON:0005743!2.44e-24!86;UBERON:0001017!1.35e-21!82;UBERON:0000073!7.40e-21!94;UBERON:0001016!7.40e-21!94;UBERON:0001049!2.27e-20!57;UBERON:0005068!2.27e-20!57;UBERON:0006241!2.27e-20!57;UBERON:0007135!2.27e-20!57;UBERON:0003075!2.61e-19!86;UBERON:0007284!2.61e-19!86;UBERON:0002346!6.04e-18!90;UBERON:0002616!3.92e-16!59;UBERON:0002780!2.28e-13!41;UBERON:0001890!2.28e-13!41;UBERON:0006240!2.28e-13!41;UBERON:0000955!2.60e-13!69;UBERON:0006238!2.60e-13!69;UBERON:0003080!6.52e-13!42;UBERON:0003056!3.68e-12!61;UBERON:0004121!1.17e-11!169;UBERON:0002298!2.10e-11!8;UBERON:0000924!4.32e-11!173;UBERON:0006601!4.32e-11!173;UBERON:0000033!1.36e-10!123;UBERON:0000153!1.91e-10!129;UBERON:0007811!1.91e-10!129;UBERON:0002020!2.50e-09!34;UBERON:0003528!2.50e-09!34;UBERON:0003076!3.88e-09!15;UBERON:0003057!3.88e-09!15;UBERON:0002308!4.30e-09!9;UBERON:0000125!4.30e-09!9;UBERON:0001893!4.68e-09!34;UBERON:0002791!2.42e-08!33;UBERON:0000922!2.78e-07!612;UBERON:0001869!3.88e-07!32;UBERON:0004733!4.48e-07!12;UBERON:0002028!4.48e-07!12;UBERON:0007277!4.48e-07!12;UBERON:0001896!6.71e-07!3;UBERON:0005290!6.71e-07!3;UBERON:0010096!6.71e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;2.73e-27;2!UBERON:0010225;2.73e-27;2!UBERON:0001896;6.93e-19;3!UBERON:0005290;6.93e-19;3!UBERON:0002240;7.92e-19;3!UBERON:0005174;7.92e-19;3!UBERON:0001137;7.92e-19;3!UBERON:0002336;1.50e-14;1!UBERON:0000996;1.50e-14;1!UBERON:0011215;1.50e-14;1!UBERON:0001018;1.50e-14;1!UBERON:0002473;1.50e-14;1!UBERON:0005340;1.50e-14;1!UBERON:0003544;1.50e-14;1!UBERON:0005970;1.50e-14;1!UBERON:0002316;1.50e-14;1!UBERON:0001020;1.50e-14;1!UBERON:0002437;1.50e-14;1!UBERON:0002784;3.60e-14;4!UBERON:0002298;6.35e-10;6!UBERON:0000073;1.61e-08;53!UBERON:0002616;1.61e-08;53!UBERON:0001894;1.71e-08;7!UBERON:0001873;3.95e-08;2!UBERON:0001954;6.35e-08;2!UBERON:0005162;6.35e-08;2!UBERON:0000122;6.35e-08;2!UBERON:0003022;6.35e-08;2!UBERON:0002421;6.35e-08;2!UBERON:0002600;6.35e-08;2!UBERON:0001017;8.57e-08;75!UBERON:0000489;1.34e-07;29!UBERON:0002780;5.98e-07;41!UBERON:0001890;5.98e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,1.60e-27,2;UBERON:0010225,1.60e-27,2;UBERON:0002240,5.06e-19,3;UBERON:0005174,5.06e-19,3;UBERON:0001137,5.06e-19,3;UBERON:0001896,1.14e-18,3;UBERON:0005290,1.14e-18,3;UBERON:0010096,1.14e-18,3;UBERON:0001049,6.12e-18,56;UBERON:0005068,6.12e-18,56;UBERON:0006241,6.12e-18,56;UBERON:0007135,6.12e-18,56;UBERON:0003075,6.63e-15,82;UBERON:0007284,6.63e-15,82;UBERON:0001017,6.73e-15,81;UBERON:0003076,1.37e-14,15;UBERON:0003057,1.37e-14,15;UBERON:0000996,1.84e-14,1;UBERON:0002336,2.75e-14,1;UBERON:0011215,2.75e-14,1;UBERON:0001018,2.75e-14,1;UBERON:0002473,2.75e-14,1;UBERON:0005340,2.75e-14,1;UBERON:0003544,2.75e-14,1;UBERON:0005970,2.75e-14,1;UBERON:0002316,2.75e-14,1;UBERON:0001020,2.75e-14,1;UBERON:0002437,2.75e-14,1;UBERON:0002784,2.76e-14,4;UBERON:0002346,3.61e-14,86;UBERON:0001016,2.48e-13,89;UBERON:0007023,7.79e-13,114;UBERON:0010371,1.52e-11,104;UBERON:0000073,1.76e-11,53;UBERON:0002616,1.76e-11,53;UBERON:0002298,8.11e-10,6;UBERON:0010314,7.23e-09,132;UBERON:0000955,9.95e-09,68;UBERON:0006238,9.95e-09,68;UBERON:0001894,1.47e-08,7;UBERON:0006222,1.47e-08,7;UBERON:0001873,3.82e-08,2;UBERON:0010122,3.82e-08,2;UBERON:0004121,5.87e-08,171;UBERON:0000924,5.87e-08,171;UBERON:0006601,5.87e-08,171;UBERON:0002780,7.54e-08,41;UBERON:0001890,7.54e-08,41;UBERON:0003080,7.54e-08,41;UBERON:0006240,7.54e-08,41;UBERON:0001954,8.04e-08,2;UBERON:0003022,8.04e-08,2;UBERON:0002421,8.04e-08,2;UBERON:0002600,8.04e-08,2;UBERON:0005162,8.60e-08,2;UBERON:0000122,8.60e-08,2;UBERON:0003056,2.17e-07,61;UBERON:0000489,3.48e-07,31 | |||
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|short_description=p3@LRAT | |short_description=p3@LRAT | ||
}} | }} |
Latest revision as of 07:44, 16 September 2015
Short description: | p3@LRAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRAT_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000502525_5end |
EntrezGene: | LRAT |
HGNC: | 6685 |
UniProt: | D6RC94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data