FFCP PHASE1:Hg19::chr10:112631661..112631695,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27250 | |EntrezGene=27250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8763 | |HGNC=8763 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483670_5end | |association_with_transcript=0bp_to_ENST00000483670_5end | ||
|cluster_id=chr10:112631661..112631695,+ | |||
|description=CAGE_peak_1_at_PDCD4_5end | |description=CAGE_peak_1_at_PDCD4_5end | ||
|id=chr10:112631661..112631695,+ | |id=chr10:112631661..112631695,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.24e-31!172;CL:0000566!1.24e-31!172;CL:0000738!3.31e-31!140;CL:0000988!4.07e-30!182;CL:0002032!2.96e-29!165;CL:0000837!2.96e-29!165;CL:0002031!3.89e-26!124;CL:0002087!1.31e-25!119;CL:0000542!3.19e-16!53;CL:0000051!3.19e-16!53;CL:0000838!9.98e-16!52;CL:0000766!3.87e-15!76;CL:0000763!1.25e-13!112;CL:0000049!1.25e-13!112;CL:0000860!3.79e-13!45;CL:0002057!5.36e-13!42;CL:0000839!1.88e-11!70;CL:0000557!3.02e-11!71;CL:0000791!4.67e-10!18;CL:0000789!4.67e-10!18;CL:0002420!4.67e-10!18;CL:0002419!4.67e-10!18;CL:0000790!4.67e-10!18;CL:0002194!4.85e-09!63;CL:0000576!4.85e-09!63;CL:0000040!4.85e-09!63;CL:0000559!4.85e-09!63;CL:0002009!8.35e-09!65;CL:0000945!5.69e-08!24;CL:0000826!5.69e-08!24;CL:0000084!1.72e-07!25;CL:0000827!1.72e-07!25;CL:0000625!1.93e-07!11;CL:0000081!6.52e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.24e-31!172;CL:0000566!1.24e-31!172;CL:0000738!3.31e-31!140;CL:0000988!4.07e-30!182;CL:0002032!2.96e-29!165;CL:0000837!2.96e-29!165;CL:0002031!3.89e-26!124;CL:0002087!1.31e-25!119;CL:0000542!3.19e-16!53;CL:0000051!3.19e-16!53;CL:0000838!9.98e-16!52;CL:0000766!3.87e-15!76;CL:0000763!1.25e-13!112;CL:0000049!1.25e-13!112;CL:0000860!3.79e-13!45;CL:0002057!5.36e-13!42;CL:0000839!1.88e-11!70;CL:0000557!3.02e-11!71;CL:0000791!4.67e-10!18;CL:0000789!4.67e-10!18;CL:0002420!4.67e-10!18;CL:0002419!4.67e-10!18;CL:0000790!4.67e-10!18;CL:0002194!4.85e-09!63;CL:0000576!4.85e-09!63;CL:0000040!4.85e-09!63;CL:0000559!4.85e-09!63;CL:0002009!8.35e-09!65;CL:0000945!5.69e-08!24;CL:0000826!5.69e-08!24;CL:0000084!1.72e-07!25;CL:0000827!1.72e-07!25;CL:0000625!1.93e-07!11;CL:0000081!6.52e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.64e-10;18!CL:0000789;4.64e-10;18!CL:0002419;4.64e-10;18!CL:0000542;8.25e-10;53!CL:0000860;1.22e-09;33!CL:0002057;1.22e-09;33!CL:0002087;2.69e-09;104!CL:0000945;5.53e-08;24!CL:0000576;6.88e-08;48!CL:0000084;1.73e-07;25!CL:0000625;1.95e-07;11!CL:0000766;3.03e-07;69!CL:0000081;6.42e-07;11!CL:0000738;8.33e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.01e-32,168;CL:0000738,1.79e-31,136;CL:0000988,5.05e-31,177;CL:0002032,2.17e-29,161;CL:0000837,2.17e-29,161;CL:0002031,2.14e-26,120;CL:0002087,6.93e-26,115;CL:0000542,3.19e-16,53;CL:0000051,3.19e-16,53;CL:0000838,9.98e-16,52;CL:0000766,2.04e-15,72;CL:0000763,1.06e-13,108;CL:0000049,1.06e-13,108;CL:0000860,5.36e-13,42;CL:0002057,5.36e-13,42;CL:0000839,1.22e-11,66;CL:0000557,2.02e-11,67;CL:0000791,4.67e-10,18;CL:0000789,4.67e-10,18;CL:0002420,4.67e-10,18;CL:0002419,4.67e-10,18;CL:0000790,4.67e-10,18;CL:0002194,3.53e-09,59;CL:0000576,3.53e-09,59;CL:0000040,3.53e-09,59;CL:0000559,3.53e-09,59;CL:0000473,3.62e-09,48;CL:0000234,3.62e-09,48;CL:0002009,6.36e-09,61;CL:0000945,5.69e-08,24;CL:0000826,5.69e-08,24;CL:0000084,1.72e-07,25;CL:0000827,1.72e-07,25;CL:0000625,1.93e-07,11;CL:0000081,6.52e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.64e-10;18!CL:0000051;8.25e-10;53!CL:0002057;1.65e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-16!102;UBERON:0003061!1.29e-16!102;UBERON:0002193!2.25e-15!112;UBERON:0002371!1.19e-09!80;UBERON:0007023!2.04e-09!115;UBERON:0001474!1.17e-08!86;UBERON:0002405!1.21e-07!115;UBERON:0004765!1.47e-07!101;UBERON:0001434!1.47e-07!101;UBERON:0000178!1.55e-07!15;UBERON:0000179!1.55e-07!15;UBERON:0000463!1.55e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-07;15!UBERON:0000179;1.55e-07;15!UBERON:0000463;1.55e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.76e-17,98;UBERON:0003061,8.76e-17,98;UBERON:0002193,1.77e-15,108;UBERON:0002405,2.03e-10,93;UBERON:0002371,9.84e-10,76;UBERON:0007023,2.00e-09,114;UBERON:0004765,8.24e-09,90;UBERON:0001474,1.07e-08,82;UBERON:0000178,1.55e-07,15;UBERON:0000179,1.55e-07,15;UBERON:0000463,1.55e-07,15;UBERON:0001434,2.70e-07,100 | |||
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| ||
|short_description=p1@PDCD4 | |short_description=p1@PDCD4 | ||
}} | }} |
Latest revision as of 09:18, 16 September 2015
Short description: | p1@PDCD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDCD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000483670_5end |
EntrezGene: | PDCD4 |
HGNC: | 8763 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.76e-17 | 98 |
blood island | 8.76e-17 | 98 |
hemolymphoid system | 1.77e-15 | 108 |
immune system | 2.03e-10 | 93 |
bone marrow | 9.84e-10 | 76 |
adult organism | 2.00e-09 | 114 |
skeletal element | 8.24e-09 | 90 |
bone element | 1.07e-08 | 82 |
blood | 1.55e-07 | 15 |
haemolymphatic fluid | 1.55e-07 | 15 |
organism substance | 1.55e-07 | 15 |
skeletal system | 2.70e-07 | 100 |