FFCP PHASE1:Hg19::chr3:159571025..159571036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=244bp_to_ENST00000482885_5end | |association_with_transcript=244bp_to_ENST00000482885_5end | ||
|cluster_id=chr3:159571025..159571036,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_41_at_SCHIP1_5end | |description=CAGE_peak_41_at_SCHIP1_5end | ||
|id=chr3:159571025..159571036,+ | |id=chr3:159571025..159571036,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.67e-09!24;CL:0005020!2.91e-07!6;CL:0002138!2.91e-07!6;CL:0005022!2.91e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.67e-09!24;CL:0005020!2.91e-07!6;CL:0002138!2.91e-07!6;CL:0005022!2.91e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002618;5.63e-13;3!CL:0002543;6.38e-07;6!CL:0002138;6.38e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,5.15e-13,3;CL:0002543,6.11e-07,6;CL:0005020,6.48e-07,6;CL:0002138,6.48e-07,6;CL:0005022,6.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.76e-11;1!UBERON:0004140;9.83e-11;1!UBERON:0010227;1.57e-10;1!UBERON:0005062;5.84e-10;4!UBERON:0007284;5.84e-10;4!UBERON:0003104;4.70e-07;31!CL:0005022;6.38e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.23e-18;2!DOID:178;3.45e-10;1!DOID:326;3.45e-10;1!DOID:3978;3.45e-10;1!DOID:3394;3.45e-10;1!DOID:5844;3.45e-10;1!DOID:1287;8.56e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.03e-18,2;DOID:178,3.96e-10,1;DOID:326,3.96e-10,1;DOID:3978,3.96e-10,1;DOID:3394,3.96e-10,1;DOID:5844,3.96e-10,1;DOID:1287,7.83e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0003103!2.78e-08!69;UBERON:0007023!5.32e-08!115;UBERON:0007100!8.28e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.03e-22;25!UBERON:0005090;1.13e-19;2!UBERON:0001630;1.13e-19;2!UBERON:0001723;2.12e-13;3!UBERON:0004151;2.12e-13;3!UBERON:0001033;2.12e-13;3!UBERON:0003978;5.63e-13;3!UBERON:0000946;5.63e-13;3!UBERON:0001389;6.73e-11;1!UBERON:0000026;6.73e-11;1!UBERON:0008784;6.73e-11;1!UBERON:0006058;6.73e-11;1!UBERON:0003663;6.73e-11;1!UBERON:0004256;6.73e-11;1!UBERON:0004708;6.73e-11;1!UBERON:0002101;6.73e-11;1!UBERON:0004709;6.73e-11;1!UBERON:0002529;6.73e-11;1!UBERON:0010538;6.73e-11;1!UBERON:0003661;6.73e-11;1!UBERON:0010890;6.73e-11;1!UBERON:0002471;6.73e-11;1!UBERON:0001383;6.73e-11;1!UBERON:0010758;6.73e-11;1!UBERON:0010707;6.73e-11;1!UBERON:0000978;6.73e-11;1!UBERON:0002103;6.73e-11;1!UBERON:0001665;6.73e-11;1!UBERON:0003823;6.73e-11;1!UBERON:0000154;6.73e-11;1!UBERON:0010709;6.73e-11;1!UBERON:0002084;7.76e-11;1!UBERON:0002082;7.76e-11;1!UBERON:0002079;1.57e-10;1!UBERON:0002146;1.57e-10;1!UBERON:0002426;1.57e-10;1!UBERON:0003831;1.57e-10;1!UBERON:0003898;1.57e-10;1!UBERON:0004830;1.57e-10;1!UBERON:0005623;1.57e-10;1!UBERON:0003830;1.57e-10;1!UBERON:0005175;1.57e-10;1!UBERON:0001774;1.57e-10;1!UBERON:0001103;1.57e-10;1!UBERON:0000948;2.45e-10;22!UBERON:0002135;3.45e-10;1!UBERON:0001134;1.57e-09;16!UBERON:0002036;1.57e-09;16!UBERON:0002066;3.85e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.54e-20,27;UBERON:0005090,1.03e-19,2;UBERON:0001630,1.03e-19,2;UBERON:0003103,1.94e-14,68;UBERON:0004151,1.70e-13,3;UBERON:0001723,2.05e-13,3;UBERON:0001033,2.05e-13,3;UBERON:0010056,2.05e-13,3;UBERON:0003978,5.81e-13,3;UBERON:0009751,5.81e-13,3;UBERON:0000946,5.81e-13,3;UBERON:0002523,5.81e-13,3;UBERON:0005983,5.81e-13,3;UBERON:0002165,5.81e-13,3;UBERON:0002062,5.81e-13,3;UBERON:0007280,5.81e-13,3;UBERON:0005418,6.73e-11,1;UBERON:0001389,6.73e-11,1;UBERON:0000026,6.73e-11,1;UBERON:0008784,6.73e-11,1;UBERON:0006058,6.73e-11,1;UBERON:0003663,6.73e-11,1;UBERON:0004256,6.73e-11,1;UBERON:0004708,6.73e-11,1;UBERON:0002101,6.73e-11,1;UBERON:0004709,6.73e-11,1;UBERON:0002529,6.73e-11,1;UBERON:0010538,6.73e-11,1;UBERON:0003661,6.73e-11,1;UBERON:0010890,6.73e-11,1;UBERON:0002471,6.73e-11,1;UBERON:0001383,6.73e-11,1;UBERON:0004357,6.73e-11,1;UBERON:0004347,6.73e-11,1;UBERON:0005420,6.73e-11,1;UBERON:0005732,6.73e-11,1;UBERON:0010758,6.73e-11,1;UBERON:0010707,6.73e-11,1;UBERON:0000978,6.73e-11,1;UBERON:0002103,6.73e-11,1;UBERON:0001665,6.73e-11,1;UBERON:0003823,6.73e-11,1;UBERON:0000154,6.73e-11,1;UBERON:0010709,6.73e-11,1;UBERON:0005733,6.73e-11,1;UBERON:0005730,6.73e-11,1;UBERON:0002084,8.14e-11,1;UBERON:0002082,8.14e-11,1;UBERON:0010226,8.14e-11,1;UBERON:0002079,1.08e-10,1;UBERON:0002426,1.43e-10,1;UBERON:0003831,1.43e-10,1;UBERON:0003898,1.43e-10,1;UBERON:0004830,1.43e-10,1;UBERON:0003830,1.43e-10,1;UBERON:0005175,1.43e-10,1;UBERON:0001774,1.43e-10,1;UBERON:0001103,1.43e-10,1;UBERON:0010084,1.43e-10,1;UBERON:0002146,2.08e-10,1;UBERON:0005623,2.08e-10,1;UBERON:0002135,2.74e-10,1;UBERON:0001009,1.08e-09,112;UBERON:0000948,1.74e-09,24;UBERON:0005498,1.74e-09,24;UBERON:0004140,1.74e-09,24;UBERON:0009881,1.74e-09,24;UBERON:0004141,1.74e-09,24;UBERON:0003084,1.74e-09,24;UBERON:0007005,1.74e-09,24;UBERON:0004139,1.74e-09,24;UBERON:0004291,1.74e-09,24;UBERON:0002066,3.65e-08,5;UBERON:0007023,6.44e-08,114 | |||
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|short_description=p41@SCHIP1 | |short_description=p41@SCHIP1 | ||
}} | }} |
Latest revision as of 09:51, 16 September 2015
Short description: | p41@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_SCHIP1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 244bp_to_ENST00000482885_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 5.15e-13 | 3 |
vein endothelial cell | 6.11e-07 | 6 |
lymphangioblast | 6.48e-07 | 6 |
endothelial cell of lymphatic vessel | 6.48e-07 | 6 |
vascular lymphangioblast | 6.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.03e-18 | 2 |
vascular disease | 3.96e-10 | 1 |
ischemia | 3.96e-10 | 1 |
extrinsic cardiomyopathy | 3.96e-10 | 1 |
myocardial ischemia | 3.96e-10 | 1 |
myocardial infarction | 3.96e-10 | 1 |
cardiovascular system disease | 7.83e-10 | 4 |