FFCP PHASE1:Hg19::chr3:159571025..159571036,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:159571025..159571036,+ to FFCP PHASE1:Hg19::chr3:159571025..159571036,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=244bp_to_ENST00000482885_5end | |||
|cluster_id=chr3:159571025..159571036,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_41_at_SCHIP1_5end | |||
|id=chr3:159571025..159571036,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.67e-09!24;CL:0005020!2.91e-07!6;CL:0002138!2.91e-07!6;CL:0005022!2.91e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002618;5.63e-13;3!CL:0002543;6.38e-07;6!CL:0002138;6.38e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,5.15e-13,3;CL:0002543,6.11e-07,6;CL:0005020,6.48e-07,6;CL:0002138,6.48e-07,6;CL:0005022,6.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.76e-11;1!UBERON:0004140;9.83e-11;1!UBERON:0010227;1.57e-10;1!UBERON:0005062;5.84e-10;4!UBERON:0007284;5.84e-10;4!UBERON:0003104;4.70e-07;31!CL:0005022;6.38e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.23e-18;2!DOID:178;3.45e-10;1!DOID:326;3.45e-10;1!DOID:3978;3.45e-10;1!DOID:3394;3.45e-10;1!DOID:5844;3.45e-10;1!DOID:1287;8.56e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.03e-18,2;DOID:178,3.96e-10,1;DOID:326,3.96e-10,1;DOID:3978,3.96e-10,1;DOID:3394,3.96e-10,1;DOID:5844,3.96e-10,1;DOID:1287,7.83e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0003103!2.78e-08!69;UBERON:0007023!5.32e-08!115;UBERON:0007100!8.28e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.03e-22;25!UBERON:0005090;1.13e-19;2!UBERON:0001630;1.13e-19;2!UBERON:0001723;2.12e-13;3!UBERON:0004151;2.12e-13;3!UBERON:0001033;2.12e-13;3!UBERON:0003978;5.63e-13;3!UBERON:0000946;5.63e-13;3!UBERON:0001389;6.73e-11;1!UBERON:0000026;6.73e-11;1!UBERON:0008784;6.73e-11;1!UBERON:0006058;6.73e-11;1!UBERON:0003663;6.73e-11;1!UBERON:0004256;6.73e-11;1!UBERON:0004708;6.73e-11;1!UBERON:0002101;6.73e-11;1!UBERON:0004709;6.73e-11;1!UBERON:0002529;6.73e-11;1!UBERON:0010538;6.73e-11;1!UBERON:0003661;6.73e-11;1!UBERON:0010890;6.73e-11;1!UBERON:0002471;6.73e-11;1!UBERON:0001383;6.73e-11;1!UBERON:0010758;6.73e-11;1!UBERON:0010707;6.73e-11;1!UBERON:0000978;6.73e-11;1!UBERON:0002103;6.73e-11;1!UBERON:0001665;6.73e-11;1!UBERON:0003823;6.73e-11;1!UBERON:0000154;6.73e-11;1!UBERON:0010709;6.73e-11;1!UBERON:0002084;7.76e-11;1!UBERON:0002082;7.76e-11;1!UBERON:0002079;1.57e-10;1!UBERON:0002146;1.57e-10;1!UBERON:0002426;1.57e-10;1!UBERON:0003831;1.57e-10;1!UBERON:0003898;1.57e-10;1!UBERON:0004830;1.57e-10;1!UBERON:0005623;1.57e-10;1!UBERON:0003830;1.57e-10;1!UBERON:0005175;1.57e-10;1!UBERON:0001774;1.57e-10;1!UBERON:0001103;1.57e-10;1!UBERON:0000948;2.45e-10;22!UBERON:0002135;3.45e-10;1!UBERON:0001134;1.57e-09;16!UBERON:0002036;1.57e-09;16!UBERON:0002066;3.85e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.54e-20,27;UBERON:0005090,1.03e-19,2;UBERON:0001630,1.03e-19,2;UBERON:0003103,1.94e-14,68;UBERON:0004151,1.70e-13,3;UBERON:0001723,2.05e-13,3;UBERON:0001033,2.05e-13,3;UBERON:0010056,2.05e-13,3;UBERON:0003978,5.81e-13,3;UBERON:0009751,5.81e-13,3;UBERON:0000946,5.81e-13,3;UBERON:0002523,5.81e-13,3;UBERON:0005983,5.81e-13,3;UBERON:0002165,5.81e-13,3;UBERON:0002062,5.81e-13,3;UBERON:0007280,5.81e-13,3;UBERON:0005418,6.73e-11,1;UBERON:0001389,6.73e-11,1;UBERON:0000026,6.73e-11,1;UBERON:0008784,6.73e-11,1;UBERON:0006058,6.73e-11,1;UBERON:0003663,6.73e-11,1;UBERON:0004256,6.73e-11,1;UBERON:0004708,6.73e-11,1;UBERON:0002101,6.73e-11,1;UBERON:0004709,6.73e-11,1;UBERON:0002529,6.73e-11,1;UBERON:0010538,6.73e-11,1;UBERON:0003661,6.73e-11,1;UBERON:0010890,6.73e-11,1;UBERON:0002471,6.73e-11,1;UBERON:0001383,6.73e-11,1;UBERON:0004357,6.73e-11,1;UBERON:0004347,6.73e-11,1;UBERON:0005420,6.73e-11,1;UBERON:0005732,6.73e-11,1;UBERON:0010758,6.73e-11,1;UBERON:0010707,6.73e-11,1;UBERON:0000978,6.73e-11,1;UBERON:0002103,6.73e-11,1;UBERON:0001665,6.73e-11,1;UBERON:0003823,6.73e-11,1;UBERON:0000154,6.73e-11,1;UBERON:0010709,6.73e-11,1;UBERON:0005733,6.73e-11,1;UBERON:0005730,6.73e-11,1;UBERON:0002084,8.14e-11,1;UBERON:0002082,8.14e-11,1;UBERON:0010226,8.14e-11,1;UBERON:0002079,1.08e-10,1;UBERON:0002426,1.43e-10,1;UBERON:0003831,1.43e-10,1;UBERON:0003898,1.43e-10,1;UBERON:0004830,1.43e-10,1;UBERON:0003830,1.43e-10,1;UBERON:0005175,1.43e-10,1;UBERON:0001774,1.43e-10,1;UBERON:0001103,1.43e-10,1;UBERON:0010084,1.43e-10,1;UBERON:0002146,2.08e-10,1;UBERON:0005623,2.08e-10,1;UBERON:0002135,2.74e-10,1;UBERON:0001009,1.08e-09,112;UBERON:0000948,1.74e-09,24;UBERON:0005498,1.74e-09,24;UBERON:0004140,1.74e-09,24;UBERON:0009881,1.74e-09,24;UBERON:0004141,1.74e-09,24;UBERON:0003084,1.74e-09,24;UBERON:0007005,1.74e-09,24;UBERON:0004139,1.74e-09,24;UBERON:0004291,1.74e-09,24;UBERON:0002066,3.65e-08,5;UBERON:0007023,6.44e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,2.06733407335463,0.71153252537342,1.67360306382335,0.402829317109147,0,0.488124115096339,0.367663080345869,0,2.41109266367015,1.34717623575702,0.788280363383256,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0.510281115829547,1.0795795805107,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.435050081742686,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,1.67569440763353,2.06244381610515,0.717873024576814,1.19807400299395,1.71690419254628,2.00854311697685,3.09043973438941,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,2.85878130549347,5.29673576292345,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,6.47428837187895,4.72248911538736,2.3196288626764,0.971421986118279,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.386747327841463,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0,0,0,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0,0,0.224263725161227,0,0.202117188958219,2.39488422686657,5.4757328173645,0.202056159043763,0.0717222053926763,0.665320713092027,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,2.06733407335463,0.71153252537342,1.67360306382335,0.402829317109147,0,0.488124115096339,0.367663080345869,0,2.41109266367015,1.34717623575702,0.788280363383256,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0.510281115829547,1.0795795805107,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.435050081742686,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,1.67569440763353,2.06244381610515,0.717873024576814,1.19807400299395,1.71690419254628,2.00854311697685,3.09043973438941,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,2.85878130549347,5.29673576292345,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,6.47428837187895,4.72248911538736,2.3196288626764,0.971421986118279,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.386747327841463,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0,0,0,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0,0,0.224263725161227,0,0.202117188958219,2.39488422686657,5.4757328173645,0.202056159043763,0.0717222053926763,0.665320713092027,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p41@SCHIP1 | |||
}} | }} |
Latest revision as of 09:51, 16 September 2015
Short description: | p41@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_SCHIP1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 244bp_to_ENST00000482885_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 5.15e-13 | 3 |
vein endothelial cell | 6.11e-07 | 6 |
lymphangioblast | 6.48e-07 | 6 |
endothelial cell of lymphatic vessel | 6.48e-07 | 6 |
vascular lymphangioblast | 6.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.03e-18 | 2 |
vascular disease | 3.96e-10 | 1 |
ischemia | 3.96e-10 | 1 |
extrinsic cardiomyopathy | 3.96e-10 | 1 |
myocardial ischemia | 3.96e-10 | 1 |
myocardial infarction | 3.96e-10 | 1 |
cardiovascular system disease | 7.83e-10 | 4 |