FFCP PHASE1:Hg19::chr11:123524778..123524799,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:123524778..123524799,- to FFCP PHASE1:Hg19::chr11:123524778..123524799,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55800 | |EntrezGene=55800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20665 | |HGNC=20665 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY72 | |UniProt=Q9NY72 | ||
|association_with_transcript=82bp_to_AJ243396_5end | |||
|cluster_id=chr11:123524778..123524799,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_SCN3B_5end | |||
|id=chr11:123524778..123524799,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.35e-12;82!UBERON:0006238;3.15e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.16e-85!41;UBERON:0001890!4.16e-85!41;UBERON:0006240!4.16e-85!41;UBERON:0001049!8.41e-85!57;UBERON:0005068!8.41e-85!57;UBERON:0006241!8.41e-85!57;UBERON:0007135!8.41e-85!57;UBERON:0001893!1.31e-84!34;UBERON:0001869!3.52e-84!32;UBERON:0002020!5.05e-84!34;UBERON:0003528!5.05e-84!34;UBERON:0003080!6.13e-83!42;UBERON:0002791!6.02e-81!33;UBERON:0002616!3.24e-77!59;UBERON:0000955!2.97e-76!69;UBERON:0006238!2.97e-76!69;UBERON:0002619!1.53e-75!22;UBERON:0001017!1.35e-73!82;UBERON:0005743!2.47e-73!86;UBERON:0000073!2.98e-72!94;UBERON:0001016!2.98e-72!94;UBERON:0001950!1.55e-68!20;UBERON:0000956!3.75e-66!25;UBERON:0000203!3.75e-66!25;UBERON:0003075!4.33e-63!86;UBERON:0007284!4.33e-63!86;UBERON:0002346!6.80e-60!90;UBERON:0003056!1.06e-58!61;UBERON:0000033!3.02e-46!123;UBERON:0000153!1.13e-43!129;UBERON:0007811!1.13e-43!129;UBERON:0007023!2.85e-43!115;UBERON:0004121!2.74e-36!169;UBERON:0000924!3.13e-35!173;UBERON:0006601!3.13e-35!173;UBERON:0000200!3.80e-23!6;UBERON:0001871!1.18e-22!7;UBERON:0002420!1.12e-19!9;UBERON:0007245!1.12e-19!9;UBERON:0010009!1.12e-19!9;UBERON:0010011!1.12e-19!9;UBERON:0000454!1.12e-19!9;UBERON:0000349!4.11e-19!5;UBERON:0001872!5.34e-19!5;UBERON:0002021!5.54e-19!5;UBERON:0002308!6.25e-19!9;UBERON:0000125!6.25e-19!9;UBERON:0000025!8.45e-19!194;UBERON:0000369!3.92e-15!4;UBERON:0002435!3.92e-15!4;UBERON:0000204!3.92e-15!4;UBERON:0010082!3.92e-15!4;UBERON:0004111!2.07e-13!241;UBERON:0009663!3.16e-13!7;UBERON:0000064!1.75e-12!219;UBERON:0002771!4.21e-12!3;UBERON:0005383!1.49e-11!3;UBERON:0005382!1.49e-11!3;UBERON:0000988!5.26e-11!3;UBERON:0000483!7.65e-11!309;UBERON:0000477!8.85e-11!286;UBERON:0000119!1.19e-10!312;UBERON:0000475!5.48e-10!365;UBERON:0001870!3.58e-09!2;UBERON:0001876!1.10e-08!2;UBERON:0001954!1.49e-08!2;UBERON:0003022!1.49e-08!2;UBERON:0002421!1.49e-08!2;UBERON:0002600!1.49e-08!2;UBERON:0002360!3.38e-08!2;UBERON:0000094!3.38e-08!2;UBERON:0007645!3.38e-08!2;UBERON:0001873!4.70e-08!2;UBERON:0010122!4.70e-08!2;UBERON:0003076!6.90e-08!15;UBERON:0003057!6.90e-08!15;UBERON:0002148!1.04e-07!2;UBERON:0009662!1.04e-07!2;UBERON:0002298!3.52e-07!8;UBERON:0004733!4.27e-07!12;UBERON:0002028!4.27e-07!12;UBERON:0007277!4.27e-07!12;UBERON:0000062!5.44e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.75e-86;22!UBERON:0001869;5.29e-84;32!UBERON:0001950;9.88e-83;20!UBERON:0001893;2.09e-79;34!UBERON:0002791;1.58e-76;32!UBERON:0000956;6.60e-76;25!UBERON:0000203;6.60e-76;25!UBERON:0003528;2.22e-70;34!UBERON:0002020;2.22e-70;34!UBERON:0002780;1.52e-48;41!UBERON:0001890;1.52e-48;41!UBERON:0000200;1.74e-33;6!UBERON:0000955;2.87e-30;68!UBERON:0000073;1.48e-29;53!UBERON:0002616;1.48e-29;53!UBERON:0001017;7.80e-27;75!UBERON:0000349;1.22e-25;5!UBERON:0001872;1.34e-25;5!UBERON:0001870;6.58e-25;3!UBERON:0002420;1.99e-21;9!UBERON:0007245;1.99e-21;9!UBERON:0010009;1.99e-21;9!UBERON:0010011;1.99e-21;9!UBERON:0000454;1.99e-21;9!UBERON:0001016;3.61e-19;83!UBERON:0001871;1.69e-18;6!UBERON:0002702;3.82e-17;2!UBERON:0001876;1.99e-16;2!UBERON:0002021;4.88e-15;5!UBERON:0009663;1.32e-10;7!UBERON:0007023;3.16e-10;114!UBERON:0002022;9.84e-10;1!UBERON:0011216;1.03e-09;132!UBERON:0002902;1.56e-09;1!UBERON:0009899;1.56e-09;1!UBERON:0007190;1.56e-09;1!UBERON:0002581;2.76e-09;1!UBERON:0001882;2.76e-09;1!UBERON:0003112;2.76e-09;1!UBERON:0011158;2.76e-09;1!UBERON:0003128;2.76e-09;1!UBERON:0005403;2.76e-09;1!UBERON:0001703;2.76e-09;1!UBERON:0002241;2.76e-09;1!UBERON:0001874;4.49e-09;1!UBERON:0000369;8.88e-09;4!UBERON:0002435;8.88e-09;4!UBERON:0000204;8.88e-09;4!UBERON:0000125;2.31e-08;9!UBERON:0002308;2.31e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.68e-93,32;UBERON:0001893,1.76e-87,34;UBERON:0002619,6.62e-86,22;UBERON:0002791,1.25e-83,32;UBERON:0001950,1.82e-82,20;UBERON:0003528,1.12e-78,34;UBERON:0002020,1.12e-78,34;UBERON:0000956,1.09e-75,25;UBERON:0000203,1.09e-75,25;UBERON:0002780,2.25e-72,41;UBERON:0001890,2.25e-72,41;UBERON:0003080,2.25e-72,41;UBERON:0006240,2.25e-72,41;UBERON:0000955,8.01e-57,68;UBERON:0006238,8.01e-57,68;UBERON:0000073,1.41e-55,53;UBERON:0002616,1.41e-55,53;UBERON:0001049,1.76e-52,56;UBERON:0005068,1.76e-52,56;UBERON:0006241,1.76e-52,56;UBERON:0007135,1.76e-52,56;UBERON:0001017,7.97e-52,81;UBERON:0003056,5.50e-48,61;UBERON:0001016,2.07e-46,89;UBERON:0003075,5.21e-35,82;UBERON:0007284,5.21e-35,82;UBERON:0000200,2.52e-33,6;UBERON:0002346,3.02e-33,86;UBERON:0007023,1.75e-30,114;UBERON:0010371,5.71e-27,104;UBERON:0000349,9.76e-26,5;UBERON:0001872,1.97e-25,5;UBERON:0001870,1.03e-24,3;UBERON:0010314,6.28e-23,132;UBERON:0004121,7.89e-23,171;UBERON:0000924,7.89e-23,171;UBERON:0006601,7.89e-23,171;UBERON:0002420,1.53e-21,9;UBERON:0007245,1.53e-21,9;UBERON:0010009,1.53e-21,9;UBERON:0010011,1.53e-21,9;UBERON:0000454,1.53e-21,9;UBERON:0001871,1.73e-18,6;UBERON:0011216,2.47e-18,223;UBERON:0002702,5.08e-17,2;UBERON:0001876,1.70e-16,2;UBERON:0002021,4.43e-15,5;UBERON:0000025,4.31e-13,192;UBERON:0009663,1.15e-10,7;UBERON:0004111,8.91e-10,240;UBERON:0002022,1.03e-09,1;UBERON:0002902,1.56e-09,1;UBERON:0009899,1.56e-09,1;UBERON:0007190,1.69e-09,1;UBERON:0002581,2.35e-09,1;UBERON:0001882,2.55e-09,1;UBERON:0005403,2.55e-09,1;UBERON:0003112,2.77e-09,1;UBERON:0011158,2.77e-09,1;UBERON:0003128,2.77e-09,1;UBERON:0001703,2.77e-09,1;UBERON:0002241,2.77e-09,1;UBERON:0004761,2.77e-09,1;UBERON:0009617,2.77e-09,1;UBERON:0001874,4.15e-09,1;UBERON:0000369,8.21e-09,4;UBERON:0002435,8.21e-09,4;UBERON:0000204,8.21e-09,4;UBERON:0010082,8.21e-09,4;UBERON:0000125,2.09e-08,9;UBERON:0002308,2.09e-08,9;UBERON:0000483,6.71e-07,306;UBERON:0000119,8.48e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,3.4324196319885,3.99227596002388,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,3.16553979779394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56660782866512,0.136203406111576,0,0,0,0,0,4.1917194094037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,5.31640907980192,3.05065662254908,1.001527445652,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,2.89031512934068,1.41696576325585,0.159633859057151,3.69209455633359,0.756215088665154,3.18123361335402,2.74508597574147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17426647706455,2.34323429584154,0.206686796501184,3.04395888930753,1.09394961803644,0,0,0,0,0.535701835878287,0,0,0.91064876540519,0,0,0,0.475788130837822,2.89400203676536,0,0,0,1.57115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,4.48743835260037,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,3.4324196319885,3.99227596002388,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,3.16553979779394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56660782866512,0.136203406111576,0,0,0,0,0,4.1917194094037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,5.31640907980192,3.05065662254908,1.001527445652,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,2.89031512934068,1.41696576325585,0.159633859057151,3.69209455633359,0.756215088665154,3.18123361335402,2.74508597574147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17426647706455,2.34323429584154,0.206686796501184,3.04395888930753,1.09394961803644,0,0,0,0,0.535701835878287,0,0,0.91064876540519,0,0,0,0.475788130837822,2.89400203676536,0,0,0,1.57115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,4.48743835260037,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@SCN3B | |||
}} | }} |
Latest revision as of 10:18, 16 September 2015
Short description: | p7@SCN3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCN3B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 82bp_to_AJ243396_5end |
EntrezGene: | SCN3B |
HGNC: | 20665 |
UniProt: | Q9NY72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data