FFCP PHASE1:Hg19::chrX:73834386..73834435,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51132 | |EntrezGene=51132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13429 | |HGNC=13429 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVW2 | |UniProt=Q9NVW2 | ||
|association_with_transcript=16bp_to_ENST00000332687,ENST00000349225_5end | |association_with_transcript=16bp_to_ENST00000332687,ENST00000349225_5end | ||
|cluster_id=chrX:73834386..73834435,- | |||
|coexpression_cluster_id=C723 | |coexpression_cluster_id=C723 | ||
|description=CAGE_peak_2_at_RLIM_5end | |description=CAGE_peak_2_at_RLIM_5end | ||
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|ontology_enrichment_celltype=CL:0000037!4.47e-33!172;CL:0000566!4.47e-33!172;CL:0000738!1.55e-31!140;CL:0002032!9.53e-30!165;CL:0000837!9.53e-30!165;CL:0000988!2.55e-28!182;CL:0000766!2.82e-28!76;CL:0002031!1.06e-26!124;CL:0000763!5.20e-26!112;CL:0000049!5.20e-26!112;CL:0002057!1.49e-25!42;CL:0000860!4.78e-25!45;CL:0000557!7.09e-25!71;CL:0002087!3.48e-24!119;CL:0000839!1.87e-23!70;CL:0002009!8.54e-22!65;CL:0002194!1.07e-20!63;CL:0000576!1.07e-20!63;CL:0000040!1.07e-20!63;CL:0000559!1.07e-20!63 | |ontology_enrichment_celltype=CL:0000037!4.47e-33!172;CL:0000566!4.47e-33!172;CL:0000738!1.55e-31!140;CL:0002032!9.53e-30!165;CL:0000837!9.53e-30!165;CL:0000988!2.55e-28!182;CL:0000766!2.82e-28!76;CL:0002031!1.06e-26!124;CL:0000763!5.20e-26!112;CL:0000049!5.20e-26!112;CL:0002057!1.49e-25!42;CL:0000860!4.78e-25!45;CL:0000557!7.09e-25!71;CL:0002087!3.48e-24!119;CL:0000839!1.87e-23!70;CL:0002009!8.54e-22!65;CL:0002194!1.07e-20!63;CL:0000576!1.07e-20!63;CL:0000040!1.07e-20!63;CL:0000559!1.07e-20!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.66e-20;33!CL:0002057;7.66e-20;33!CL:0000576;4.28e-16;48!CL:0000473;1.02e-13;39!CL:0000234;1.02e-13;39!CL:0000766;3.74e-13;69!CL:0000763;5.43e-09;100!CL:0002087;6.44e-09;104!CL:0000738;4.68e-07;136!CL:0000094;7.14e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;7.66e-20;33!CL:0002057;7.66e-20;33!CL:0000576;4.28e-16;48!CL:0000473;1.02e-13;39!CL:0000234;1.02e-13;39!CL:0000766;3.74e-13;69!CL:0000763;5.43e-09;100!CL:0002087;6.44e-09;104!CL:0000738;4.68e-07;136!CL:0000094;7.14e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.42e-32,168;CL:0000738,6.63e-31,136;CL:0002032,5.04e-29,161;CL:0000837,5.04e-29,161;CL:0000988,2.04e-28,177;CL:0000766,2.71e-28,72;CL:0002031,2.29e-26,120;CL:0000860,1.17e-25,42;CL:0002057,1.17e-25,42;CL:0000763,2.08e-25,108;CL:0000049,2.08e-25,108;CL:0000557,7.49e-25,67;CL:0002087,7.69e-24,115;CL:0000839,2.12e-23,66;CL:0000473,8.32e-22,48;CL:0000234,8.32e-22,48;CL:0002009,9.62e-22,61;CL:0002194,1.24e-20,59;CL:0000576,1.24e-20,59;CL:0000040,1.24e-20,59;CL:0000559,1.24e-20,59;CL:0000094,9.83e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.17e-19;42!CL:0000049;2.20e-08;108 | |ontology_enrichment_development_v019=CL:0002057;3.17e-19;42!CL:0000049;2.20e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.17e-19!102;UBERON:0003061!6.17e-19!102;UBERON:0002371!9.24e-19!80;UBERON:0001474!1.46e-18!86;UBERON:0002193!3.90e-17!112;UBERON:0004765!7.62e-15!101;UBERON:0001434!7.62e-15!101;UBERON:0002405!3.51e-11!115;UBERON:0007023!9.30e-08!115;UBERON:0001017!2.85e-07!82;UBERON:0001049!5.03e-07!57;UBERON:0005068!5.03e-07!57;UBERON:0006241!5.03e-07!57;UBERON:0007135!5.03e-07!57;UBERON:0000073!7.58e-07!94;UBERON:0001016!7.58e-07!94 | |ontology_enrichment_uberon=UBERON:0002390!6.17e-19!102;UBERON:0003061!6.17e-19!102;UBERON:0002371!9.24e-19!80;UBERON:0001474!1.46e-18!86;UBERON:0002193!3.90e-17!112;UBERON:0004765!7.62e-15!101;UBERON:0001434!7.62e-15!101;UBERON:0002405!3.51e-11!115;UBERON:0007023!9.30e-08!115;UBERON:0001017!2.85e-07!82;UBERON:0001049!5.03e-07!57;UBERON:0005068!5.03e-07!57;UBERON:0006241!5.03e-07!57;UBERON:0007135!5.03e-07!57;UBERON:0000073!7.58e-07!94;UBERON:0001016!7.58e-07!94 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-18,98;UBERON:0003061,1.97e-18,98;UBERON:0002371,2.24e-18,76;UBERON:0001474,3.72e-18,82;UBERON:0002193,1.18e-16,108;UBERON:0002405,1.18e-16,93;UBERON:0004765,3.50e-15,90;UBERON:0001434,4.17e-13,100;UBERON:0001016,8.30e-08,89;UBERON:0007023,1.55e-07,114;UBERON:0001017,3.77e-07,81;UBERON:0001049,5.94e-07,56;UBERON:0005068,5.94e-07,56;UBERON:0006241,5.94e-07,56;UBERON:0007135,5.94e-07,56 | |||
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| ||
|short_description=p2@RLIM | |short_description=p2@RLIM | ||
}} | }} |
Latest revision as of 10:53, 16 September 2015
Short description: | p2@RLIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RLIM_5end |
Coexpression cluster: | C723_CD14_CD4_Eosinophils_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 16bp_to_ENST00000332687, ENST00000349225_5end |
EntrezGene: | RLIM |
HGNC: | 13429 |
UniProt: | Q9NVW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.42e-32 | 168 |
leukocyte | 6.63e-31 | 136 |
hematopoietic oligopotent progenitor cell | 5.04e-29 | 161 |
hematopoietic multipotent progenitor cell | 5.04e-29 | 161 |
hematopoietic cell | 2.04e-28 | 177 |
myeloid leukocyte | 2.71e-28 | 72 |
hematopoietic lineage restricted progenitor cell | 2.29e-26 | 120 |
classical monocyte | 1.17e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-25 | 42 |
myeloid cell | 2.08e-25 | 108 |
common myeloid progenitor | 2.08e-25 | 108 |
granulocyte monocyte progenitor cell | 7.49e-25 | 67 |
nongranular leukocyte | 7.69e-24 | 115 |
myeloid lineage restricted progenitor cell | 2.12e-23 | 66 |
defensive cell | 8.32e-22 | 48 |
phagocyte | 8.32e-22 | 48 |
macrophage dendritic cell progenitor | 9.62e-22 | 61 |
monopoietic cell | 1.24e-20 | 59 |
monocyte | 1.24e-20 | 59 |
monoblast | 1.24e-20 | 59 |
promonocyte | 1.24e-20 | 59 |
granulocyte | 9.83e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-18 | 98 |
blood island | 1.97e-18 | 98 |
bone marrow | 2.24e-18 | 76 |
bone element | 3.72e-18 | 82 |
hemolymphoid system | 1.18e-16 | 108 |
immune system | 1.18e-16 | 93 |
skeletal element | 3.50e-15 | 90 |
skeletal system | 4.17e-13 | 100 |
nervous system | 8.30e-08 | 89 |
adult organism | 1.55e-07 | 114 |
central nervous system | 3.77e-07 | 81 |
neural tube | 5.94e-07 | 56 |
neural rod | 5.94e-07 | 56 |
future spinal cord | 5.94e-07 | 56 |
neural keel | 5.94e-07 | 56 |