FFCP PHASE1:Hg19::chr1:11865982..11866005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4524 | |EntrezGene=4524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7436 | |HGNC=7436 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SNW5 | |UniProt=Q5SNW5 | ||
|association_with_transcript=0bp_to_ENST00000418034_5end | |association_with_transcript=0bp_to_ENST00000418034_5end | ||
|cluster_id=chr1:11865982..11866005,- | |||
|description=CAGE_peak_4_at_MTHFR_5end | |description=CAGE_peak_4_at_MTHFR_5end | ||
|id=chr1:11865982..11866005,- | |id=chr1:11865982..11866005,- | ||
|ontology_enrichment_celltype=CL:0000988!2.53e-17!182;CL:0002032!4.90e-17!165;CL:0000837!4.90e-17!165;CL:0000037!2.57e-16!172;CL:0000566!2.57e-16!172;CL:0000763!3.15e-16!112;CL:0000049!3.15e-16!112;CL:0000738!2.27e-13!140;CL:0000766!2.88e-11!76;CL:0002031!3.09e-11!124;CL:0000557!5.05e-10!71;CL:0002057!5.25e-10!42;CL:0000839!8.00e-10!70;CL:0002087!4.29e-09!119;CL:0000860!4.62e-09!45;CL:0002009!1.21e-08!65;CL:0002194!6.69e-08!63;CL:0000576!6.69e-08!63;CL:0000040!6.69e-08!63;CL:0000559!6.69e-08!63 | |ontology_enrichment_celltype=CL:0000988!2.53e-17!182;CL:0002032!4.90e-17!165;CL:0000837!4.90e-17!165;CL:0000037!2.57e-16!172;CL:0000566!2.57e-16!172;CL:0000763!3.15e-16!112;CL:0000049!3.15e-16!112;CL:0000738!2.27e-13!140;CL:0000766!2.88e-11!76;CL:0002031!3.09e-11!124;CL:0000557!5.05e-10!71;CL:0002057!5.25e-10!42;CL:0000839!8.00e-10!70;CL:0002087!4.29e-09!119;CL:0000860!4.62e-09!45;CL:0002009!1.21e-08!65;CL:0002194!6.69e-08!63;CL:0000576!6.69e-08!63;CL:0000040!6.69e-08!63;CL:0000559!6.69e-08!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.45e-07;33!CL:0002057;3.45e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.24e-17,177;CL:0000763,2.89e-17,108;CL:0000049,2.89e-17,108;CL:0002032,6.27e-17,161;CL:0000837,6.27e-17,161;CL:0000037,1.61e-16,168;CL:0000738,2.96e-14,136;CL:0000766,9.10e-13,72;CL:0002031,1.35e-11,120;CL:0000557,1.48e-11,67;CL:0000839,2.53e-11,66;CL:0000860,2.67e-10,42;CL:0002057,2.67e-10,42;CL:0002009,2.80e-10,61;CL:0000473,1.17e-09,48;CL:0000234,1.17e-09,48;CL:0002087,1.85e-09,115;CL:0002194,2.21e-09,59;CL:0000576,2.21e-09,59;CL:0000040,2.21e-09,59;CL:0000559,2.21e-09,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.93e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.32e-08!102;UBERON:0003061!2.32e-08!102;UBERON:0002193!3.01e-08!112;UBERON:0001474!1.07e-07!86;UBERON:0002405!1.10e-07!115;UBERON:0002371!1.37e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-10,98;UBERON:0003061,1.97e-10,98;UBERON:0002193,5.09e-10,108;UBERON:0002405,1.05e-09,93;UBERON:0001474,1.68e-09,82;UBERON:0002371,2.39e-09,76;UBERON:0004765,3.03e-08,90 | |||
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| ||
|short_description=p4@MTHFR | |short_description=p4@MTHFR | ||
}} | }} |
Latest revision as of 11:03, 16 September 2015
Short description: | p4@MTHFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MTHFR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000418034_5end |
EntrezGene: | MTHFR |
HGNC: | 7436 |
UniProt: | Q5SNW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.24e-17 | 177 |
myeloid cell | 2.89e-17 | 108 |
common myeloid progenitor | 2.89e-17 | 108 |
hematopoietic oligopotent progenitor cell | 6.27e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.27e-17 | 161 |
hematopoietic stem cell | 1.61e-16 | 168 |
leukocyte | 2.96e-14 | 136 |
myeloid leukocyte | 9.10e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 1.35e-11 | 120 |
granulocyte monocyte progenitor cell | 1.48e-11 | 67 |
myeloid lineage restricted progenitor cell | 2.53e-11 | 66 |
classical monocyte | 2.67e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.67e-10 | 42 |
macrophage dendritic cell progenitor | 2.80e-10 | 61 |
defensive cell | 1.17e-09 | 48 |
phagocyte | 1.17e-09 | 48 |
nongranular leukocyte | 1.85e-09 | 115 |
monopoietic cell | 2.21e-09 | 59 |
monocyte | 2.21e-09 | 59 |
monoblast | 2.21e-09 | 59 |
promonocyte | 2.21e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-10 | 98 |
blood island | 1.97e-10 | 98 |
hemolymphoid system | 5.09e-10 | 108 |
immune system | 1.05e-09 | 93 |
bone element | 1.68e-09 | 82 |
bone marrow | 2.39e-09 | 76 |
skeletal element | 3.03e-08 | 90 |