FFCP PHASE1:Hg19::chr5:156536126..156536141,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84868 | |EntrezGene=84868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18437 | |HGNC=18437 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHN3,Q8TDQ0 | |UniProt=E5RHN3,Q8TDQ0 | ||
|association_with_transcript=0bp_to_ENST00000522593,uc003lwk.1,uc003lwl.2_5end | |association_with_transcript=0bp_to_ENST00000522593,uc003lwk.1,uc003lwl.2_5end | ||
|cluster_id=chr5:156536126..156536141,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_5_at_HAVCR2_5end | |description=CAGE_peak_5_at_HAVCR2_5end | ||
|id=chr5:156536126..156536141,- | |id=chr5:156536126..156536141,- | ||
|ontology_enrichment_celltype=CL:0000860;9.56e-46;33!CL:0002057;9.56e-46;33!CL:0000473;3.41e-42;39!CL:0000234;3.41e-42;39!CL:0000576;4.05e-36;48!CL:0000766;4.56e-27;69!CL:0000763;4.78e-14;100!CL:0000738;5.16e-13;136!CL:0002087;4.25e-12;104!CL:0000451;6.59e-11;10!CL:0000990;2.92e-09;8!CL:0000840;4.66e-09;5!CL:0002393;1.78e-08;6!CL:0002397;1.78e-08;6!CL:0000988;3.35e-07;177 | |ontology_enrichment_celltype=CL:0000037!1.28e-48!172;CL:0000566!1.28e-48!172;CL:0000738!3.74e-48!140;CL:0002032!8.76e-45!165;CL:0000837!8.76e-45!165;CL:0000557!1.29e-44!71;CL:0000988!1.77e-44!182;CL:0002031!3.00e-42!124;CL:0000766!1.27e-41!76;CL:0000763!2.03e-41!112;CL:0000049!2.03e-41!112;CL:0002009!1.74e-40!65;CL:0002057!2.90e-40!42;CL:0000839!3.12e-40!70;CL:0002087!3.65e-40!119;CL:0002194!1.20e-38!63;CL:0000576!1.20e-38!63;CL:0000040!1.20e-38!63;CL:0000559!1.20e-38!63;CL:0000860!2.86e-36!45;CL:0000451!6.44e-09!10;CL:0000990!7.95e-08!8;CL:0002393!1.52e-07!9;CL:0002397!1.52e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;9.56e-46;33!CL:0002057;9.56e-46;33!CL:0000473;3.41e-42;39!CL:0000234;3.41e-42;39!CL:0000576;4.05e-36;48!CL:0000766;4.56e-27;69!CL:0000763;4.78e-14;100!CL:0000738;5.16e-13;136!CL:0002087;4.25e-12;104!CL:0000451;6.59e-11;10!CL:0000990;2.92e-09;8!CL:0000840;4.66e-09;5!CL:0002393;1.78e-08;6!CL:0002397;1.78e-08;6!CL:0000988;3.35e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.09e-70,67;CL:0002009,1.06e-65,61;CL:0000766,4.16e-64,72;CL:0000839,1.44e-63,66;CL:0002194,6.96e-63,59;CL:0000576,6.96e-63,59;CL:0000040,6.96e-63,59;CL:0000559,6.96e-63,59;CL:0000473,2.91e-61,48;CL:0000234,2.91e-61,48;CL:0000860,6.36e-57,42;CL:0002057,6.36e-57,42;CL:0000738,1.12e-52,136;CL:0000763,4.91e-52,108;CL:0000049,4.91e-52,108;CL:0000037,5.08e-47,168;CL:0002031,5.95e-46,120;CL:0002087,4.34e-44,115;CL:0000988,3.02e-43,177;CL:0002032,6.32e-42,161;CL:0000837,6.32e-42,161;CL:0000451,6.81e-11,10;CL:0000134,4.00e-10,354;CL:0002320,1.69e-09,361;CL:0000990,2.98e-09,8;CL:0000840,3.77e-09,5;CL:0001029,3.77e-09,5;CL:0002393,1.38e-08,9;CL:0002397,1.38e-08,9;CL:0000219,2.31e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-41;42!CL:0000049;1.59e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;1.77e-08;15!UBERON:0000179;1.77e-08;15!UBERON:0000463;1.77e-08;15!UBERON:0002420;7.46e-08;9!UBERON:0007245;7.46e-08;9!UBERON:0010009;7.46e-08;9!UBERON:0010011;7.46e-08;9!UBERON:0000454;7.46e-08;9!UBERON:0000125;9.57e-08;9!UBERON:0002308;9.57e-08;9!UBERON:0002390;1.68e-07;32!UBERON:0002298;3.99e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.99e-46!102;UBERON:0003061!3.99e-46!102;UBERON:0002193!9.20e-42!112;UBERON:0002371!1.22e-39!80;UBERON:0001474!5.11e-35!86;UBERON:0002405!1.25e-30!115;UBERON:0004765!6.71e-27!101;UBERON:0001434!6.71e-27!101;UBERON:0007023!8.33e-27!115;UBERON:0001049!8.69e-12!57;UBERON:0005068!8.69e-12!57;UBERON:0006241!8.69e-12!57;UBERON:0007135!8.69e-12!57;UBERON:0003081!1.22e-11!216;UBERON:0002780!2.32e-10!41;UBERON:0001890!2.32e-10!41;UBERON:0006240!2.32e-10!41;UBERON:0003080!6.61e-10!42;UBERON:0002204!3.28e-09!167;UBERON:0002616!3.45e-09!59;UBERON:0002020!2.48e-08!34;UBERON:0003528!2.48e-08!34;UBERON:0001893!3.06e-08!34;UBERON:0002791!7.37e-08!33;UBERON:0001869!3.70e-07!32;UBERON:0002420!5.01e-07!9;UBERON:0007245!5.01e-07!9;UBERON:0010009!5.01e-07!9;UBERON:0010011!5.01e-07!9;UBERON:0000454!5.01e-07!9;UBERON:0002308!7.15e-07!9;UBERON:0000125!7.15e-07!9;UBERON:0000955!9.09e-07!69;UBERON:0006238!9.09e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.77e-08;15!UBERON:0000179;1.77e-08;15!UBERON:0000463;1.77e-08;15!UBERON:0002420;7.46e-08;9!UBERON:0007245;7.46e-08;9!UBERON:0010009;7.46e-08;9!UBERON:0010011;7.46e-08;9!UBERON:0000454;7.46e-08;9!UBERON:0000125;9.57e-08;9!UBERON:0002308;9.57e-08;9!UBERON:0002390;1.68e-07;32!UBERON:0002298;3.99e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.92e-71,98;UBERON:0003061,5.92e-71,98;UBERON:0002193,3.49e-64,108;UBERON:0002371,1.86e-63,76;UBERON:0001474,2.75e-57,82;UBERON:0002405,9.56e-56,93;UBERON:0004765,2.41e-50,90;UBERON:0001434,3.04e-43,100;UBERON:0003081,9.12e-23,203;UBERON:0002204,4.94e-18,167;UBERON:0002384,4.66e-09,371;UBERON:0000178,1.67e-08,15;UBERON:0000179,1.67e-08,15;UBERON:0000463,1.67e-08,15;UBERON:0002420,5.17e-08,9;UBERON:0007245,5.17e-08,9;UBERON:0010009,5.17e-08,9;UBERON:0010011,5.17e-08,9;UBERON:0000454,5.17e-08,9;UBERON:0000926,7.76e-08,315;UBERON:0004120,7.76e-08,315;UBERON:0006603,7.76e-08,315;UBERON:0000125,8.27e-08,9;UBERON:0002308,8.27e-08,9;UBERON:0002298,5.41e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.246301768349837,0.314843125254717,10.6208354749204,6.52509976765262,8.05043841243595,0,0,0,1.85921281392724,0,2.34880351467878,13.2958898047651,6.01633342410425,5.859293509328,3.58264758783879,5.18229865630367,3.60605794687861,22.9729217271712,42.6999816368355,25.4713264247207,43.2318008644573,68.6650372996449,94.4604431230066,117.66618845976,110.661425220571,172.15906335889,51.0223607490195,70.357830510637,56.8791243696235,39.9073759830322,63.5871329634781,79.3273900091149,61.8289462589223,85.3671212022409,64.5730497057032,57.7239775326753,94.1468463974102,91.2120966139966,27.2796684310869,24.9649498864101,23.0444232128363,105.273190742575,138.192973381353,185.47927337817,19.3727840842678,44.5615939544953,34.8108626184973,2.74631872205524,1.06302149982522,3.35453832813401,3.36985893439485,3.15371474967163,2.57160938715328,1.14005097496499,0.79566670879636,1.27864907635244,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,3.92355994087075,1.58030450865046,0.196709770113833,0,0.616804496998528,2.50779743086017,0.651844533267181,0.473447805734733,0,3.56513462032555,0.589211814949674,1.10766947291811,1.35401931882508,2.30564375506215,2.86130564631732,15.6216009373492,12.712100818149,8.69409257205158,0.444859689486181,0.535081656179426,0,4.19244567980995,0.383220493601921,0.68725489096526,0.253019692019503,1.27426165729639,0,0,1.95747654801105,0.895906278080929,0,0.473554504088034,0.821127996921047,1.00803371612366,0,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,10.7100639906045,9.5771355514597,9.30705723632056,1.90792499444274,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17055712783534,9.36017060556951,2.52672975890838,0,0,0,0,0,0,3.94130590316755,0.704387472105808,2.69526550203004,3.45887888200707,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.51128545716063,0,0,0,0,0,0,0,0,10.0485687702983,4.74380664690938,9.88241379354062,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,4.96142661882819,3.94891963872744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,1.52925763827023,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0,0,0,0,3.04468565539302,1.52927441428475,1.13929437434833,3.09701308095126,1.64544909234478,1.94541993357815,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,9.7667738767507,2.11673582723883,0,6.45833509660955,0.228234679033192,0,2.50634477090067,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,2.81974010175699,0,1.31857361344705,0,2.22886768554957,0,0,0.296964680832639,0,3.97659059106519,1.40669416410513,0,2.80166586185491,0,0.796991953004279,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0.591860433821602,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.68835014075571,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0.664846727600626,0,0,0,0,0.317873157960757,0,0,0,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,1.95463285643963,0.802577647298789,0.468528891450678,0,0,0,0,0,0.30607276163049,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0.823040347426423,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.9166753044879,1.27746588066972,0,0.788662062837943,0,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0.254019996197353,2.38568906942791,0.544813624446302,0,0,0,16.198120191708,5.41661368190565,0.728994679896296,0,6.38326229123505,2.30800187793992,0,0,0,0.714695326373367,0,0,0,0,0,0,0.985110248992068,0,0,0.293104467356165,2.65013777824443,2.19781025814636,1.3223260174269,0,0,2.24253566392159,3.77290332239198,0.828478110694391,5.45782623993146,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.366078794705889,0.625954653532499,1.72022758707021,2.21858103073705,2.11127770000704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,1.16916185303633,1.46151324344699,0.327130788511688,0,0,0,8.79944541761692,0.106691729694141,1.72214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,1.27707087245721,0.615349092722265,0,0.345786262321089,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.742913430802341,0,0.413373593002368,0.634158101939068,0,0.548257766857182,0,0,0,0,1.00885116665647,1.21393120847326,0.455324382702595,0.0887023701626388,0.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| ||
|short_description=p5@HAVCR2 | |short_description=p5@HAVCR2 | ||
}} | }} |
Latest revision as of 13:22, 16 September 2015
Short description: | p5@HAVCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HAVCR2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000522593, uc003lwk.1, uc003lwl.2_5end |
EntrezGene: | HAVCR2 |
HGNC: | 18437 |
UniProt: | E5RHN3Q8TDQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.92e-71 | 98 |
blood island | 5.92e-71 | 98 |
hemolymphoid system | 3.49e-64 | 108 |
bone marrow | 1.86e-63 | 76 |
bone element | 2.75e-57 | 82 |
immune system | 9.56e-56 | 93 |
skeletal element | 2.41e-50 | 90 |
skeletal system | 3.04e-43 | 100 |
lateral plate mesoderm | 9.12e-23 | 203 |
musculoskeletal system | 4.94e-18 | 167 |
connective tissue | 4.66e-09 | 371 |
blood | 1.67e-08 | 15 |
haemolymphatic fluid | 1.67e-08 | 15 |
organism substance | 1.67e-08 | 15 |
basal ganglion | 5.17e-08 | 9 |
nuclear complex of neuraxis | 5.17e-08 | 9 |
aggregate regional part of brain | 5.17e-08 | 9 |
collection of basal ganglia | 5.17e-08 | 9 |
cerebral subcortex | 5.17e-08 | 9 |
mesoderm | 7.76e-08 | 315 |
mesoderm-derived structure | 7.76e-08 | 315 |
presumptive mesoderm | 7.76e-08 | 315 |
neural nucleus | 8.27e-08 | 9 |
nucleus of brain | 8.27e-08 | 9 |
brainstem | 5.41e-07 | 6 |