FFCP PHASE1:Hg19::chr19:18288828..18288861,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10437 | |EntrezGene=10437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5398 | |HGNC=5398 | ||
|TSSclassifier=strong | |||
|UniProt=Q96P99 | |UniProt=Q96P99 | ||
|association_with_transcript=166bp_to_AF401212_5end | |association_with_transcript=166bp_to_AF401212_5end | ||
|cluster_id=chr19:18288828..18288861,+ | |||
|coexpression_cluster_id=C143 | |coexpression_cluster_id=C143 | ||
|description=CAGE_peak_7_at_IFI30_5end | |description=CAGE_peak_7_at_IFI30_5end | ||
|id=chr19:18288828..18288861,+ | |id=chr19:18288828..18288861,+ | ||
|ontology_enrichment_celltype=CL:0002194!6.62e-60!63;CL:0000576!6.62e-60!63;CL:0000040!6.62e-60!63;CL:0000559!6.62e-60!63;CL:0002009!1.36e-59!65;CL:0000557!2.46e-54!71;CL:0000839!2.26e-53!70;CL:0000766!3.56e-53!76;CL:0000860!8.10e-53!45;CL:0002057!1.98e-51!42;CL:0002087!2.29e-45!119;CL:0000738!6.28e-45!140;CL:0002031!2.15e-39!124;CL:0000763!5.68e-39!112;CL:0000049!5.68e-39!112;CL:0000037!4.69e-35!172;CL:0000566!4.69e-35!172;CL:0002032!2.17e-34!165;CL:0000837!2.17e-34!165;CL:0000988!2.24e-33!182;CL:0002393!4.22e-11!9;CL:0002397!4.22e-11!9;CL:0000134!2.20e-10!358;CL:0002320!4.85e-10!365;CL:0000235!7.82e-09!10;CL:0000219!6.94e-08!390 | |ontology_enrichment_celltype=CL:0002194!6.62e-60!63;CL:0000576!6.62e-60!63;CL:0000040!6.62e-60!63;CL:0000559!6.62e-60!63;CL:0002009!1.36e-59!65;CL:0000557!2.46e-54!71;CL:0000839!2.26e-53!70;CL:0000766!3.56e-53!76;CL:0000860!8.10e-53!45;CL:0002057!1.98e-51!42;CL:0002087!2.29e-45!119;CL:0000738!6.28e-45!140;CL:0002031!2.15e-39!124;CL:0000763!5.68e-39!112;CL:0000049!5.68e-39!112;CL:0000037!4.69e-35!172;CL:0000566!4.69e-35!172;CL:0002032!2.17e-34!165;CL:0000837!2.17e-34!165;CL:0000988!2.24e-33!182;CL:0002393!4.22e-11!9;CL:0002397!4.22e-11!9;CL:0000134!2.20e-10!358;CL:0002320!4.85e-10!365;CL:0000235!7.82e-09!10;CL:0000219!6.94e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.71e-91;33!CL:0002057;3.71e-91;33!CL:0000473;8.63e-91;39!CL:0000234;8.63e-91;39!CL:0000576;4.13e-76;48!CL:0000766;3.05e-52;69!CL:0000763;7.74e-23;100!CL:0000235;2.15e-19;6!CL:0000738;3.12e-18;136!CL:0002393;1.22e-17;6!CL:0002397;1.22e-17;6!CL:0002087;1.25e-17;104!CL:0002619;4.30e-10;3!CL:0000988;5.01e-09;177!CL:0000990;2.27e-08;8!CL:0000219;2.59e-08;193!CL:0000451;8.69e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.95e-140,59;CL:0000576,4.95e-140,59;CL:0000040,4.95e-140,59;CL:0000559,4.95e-140,59;CL:0000473,1.05e-138,48;CL:0000234,1.05e-138,48;CL:0002009,4.08e-135,61;CL:0000839,4.13e-124,66;CL:0000557,4.19e-122,67;CL:0000860,9.69e-120,42;CL:0002057,9.69e-120,42;CL:0000766,2.39e-117,72;CL:0000763,1.11e-80,108;CL:0000049,1.11e-80,108;CL:0002087,3.85e-69,115;CL:0000738,5.13e-64,136;CL:0002031,3.51e-63,120;CL:0002032,3.69e-52,161;CL:0000837,3.69e-52,161;CL:0000037,1.82e-49,168;CL:0000988,2.57e-46,177;CL:0002393,4.86e-20,9;CL:0002397,4.86e-20,9;CL:0000235,2.49e-19,6;CL:0000134,1.27e-18,354;CL:0002320,5.23e-18,361;CL:0000219,7.66e-16,386;CL:0000048,5.19e-14,427;CL:0000723,1.24e-13,433;CL:0000034,3.81e-13,441;CL:0002619,4.24e-10,3;CL:0000990,2.10e-08,8;CL:0000451,8.15e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-84;42!CL:0000049;1.46e-23;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-53!102;UBERON:0003061!2.08e-53!102;UBERON:0002193!7.47e-51!112;UBERON:0002371!1.77e-47!80;UBERON:0001474!4.77e-44!86;UBERON:0002405!1.12e-40!115;UBERON:0004765!8.81e-37!101;UBERON:0001434!8.81e-37!101;UBERON:0002204!3.06e-17!167;UBERON:0003081!6.64e-16!216;UBERON:0002384!1.96e-09!375;UBERON:0000926!1.32e-08!448;UBERON:0004120!1.32e-08!448;UBERON:0006603!1.32e-08!448 | |ontology_enrichment_uberon=UBERON:0002390!2.08e-53!102;UBERON:0003061!2.08e-53!102;UBERON:0002193!7.47e-51!112;UBERON:0002371!1.77e-47!80;UBERON:0001474!4.77e-44!86;UBERON:0002405!1.12e-40!115;UBERON:0004765!8.81e-37!101;UBERON:0001434!8.81e-37!101;UBERON:0002204!3.06e-17!167;UBERON:0003081!6.64e-16!216;UBERON:0002384!1.96e-09!375;UBERON:0000926!1.32e-08!448;UBERON:0004120!1.32e-08!448;UBERON:0006603!1.32e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.19e-106,76;UBERON:0001474,8.47e-98,82;UBERON:0002390,6.78e-90,98;UBERON:0003061,6.78e-90,98;UBERON:0002405,2.46e-88,93;UBERON:0004765,4.13e-88,90;UBERON:0002193,1.29e-83,108;UBERON:0001434,3.72e-78,100;UBERON:0002204,6.06e-44,167;UBERON:0003081,9.49e-39,203;UBERON:0000926,1.96e-20,315;UBERON:0004120,1.96e-20,315;UBERON:0006603,1.96e-20,315;UBERON:0002384,3.61e-17,371;UBERON:0000923,2.25e-07,560;UBERON:0010316,2.25e-07,560;UBERON:0005291,2.25e-07,560;UBERON:0006598,2.25e-07,560;UBERON:0010317,2.25e-07,560;UBERON:0002532,2.25e-07,560;UBERON:0002050,3.16e-07,564 | |||
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|short_description=p7@IFI30 | |short_description=p7@IFI30 | ||
}} | }} |
Latest revision as of 14:20, 16 September 2015
Short description: | p7@IFI30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IFI30_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 166bp_to_AF401212_5end |
EntrezGene: | IFI30 |
HGNC: | 5398 |
UniProt: | Q96P99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.19e-106 | 76 |
bone element | 8.47e-98 | 82 |
hematopoietic system | 6.78e-90 | 98 |
blood island | 6.78e-90 | 98 |
immune system | 2.46e-88 | 93 |
skeletal element | 4.13e-88 | 90 |
hemolymphoid system | 1.29e-83 | 108 |
skeletal system | 3.72e-78 | 100 |
musculoskeletal system | 6.06e-44 | 167 |
lateral plate mesoderm | 9.49e-39 | 203 |
mesoderm | 1.96e-20 | 315 |
mesoderm-derived structure | 1.96e-20 | 315 |
presumptive mesoderm | 1.96e-20 | 315 |
connective tissue | 3.61e-17 | 371 |
germ layer | 2.25e-07 | 560 |
germ layer / neural crest | 2.25e-07 | 560 |
embryonic tissue | 2.25e-07 | 560 |
presumptive structure | 2.25e-07 | 560 |
germ layer / neural crest derived structure | 2.25e-07 | 560 |
epiblast (generic) | 2.25e-07 | 560 |
embryonic structure | 3.16e-07 | 564 |