FFCP PHASE1:Hg19::chr19:18314784..18314793,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5864 | |EntrezGene=5864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9777 | |HGNC=9777 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000481914_5end | |association_with_transcript=28bp_to_ENST00000481914_5end | ||
|cluster_id=chr19:18314784..18314793,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_RAB3A_5end | |description=CAGE_peak_3_at_RAB3A_5end | ||
|id=chr19:18314784..18314793,- | |id=chr19:18314784..18314793,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.65e-16;82!UBERON:0006215;1.77e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.28e-32!57;UBERON:0005068!6.28e-32!57;UBERON:0006241!6.28e-32!57;UBERON:0007135!6.28e-32!57;UBERON:0001017!3.04e-31!82;UBERON:0005743!4.94e-31!86;UBERON:0000073!1.67e-30!94;UBERON:0001016!1.67e-30!94;UBERON:0002616!6.76e-28!59;UBERON:0002780!2.38e-27!41;UBERON:0001890!2.38e-27!41;UBERON:0006240!2.38e-27!41;UBERON:0000955!7.55e-27!69;UBERON:0006238!7.55e-27!69;UBERON:0003080!2.59e-26!42;UBERON:0002346!8.28e-25!90;UBERON:0001893!1.83e-24!34;UBERON:0002020!2.06e-24!34;UBERON:0003528!2.06e-24!34;UBERON:0003075!9.13e-24!86;UBERON:0007284!9.13e-24!86;UBERON:0002791!1.78e-23!33;UBERON:0001869!1.96e-23!32;UBERON:0002619!1.75e-20!22;UBERON:0001950!1.14e-18!20;UBERON:0003056!2.82e-18!61;UBERON:0000956!3.75e-18!25;UBERON:0000203!3.75e-18!25;UBERON:0007023!8.15e-18!115;UBERON:0000924!5.79e-16!173;UBERON:0006601!5.79e-16!173;UBERON:0004121!4.71e-15!169;UBERON:0000033!1.48e-13!123;UBERON:0000153!4.41e-13!129;UBERON:0007811!4.41e-13!129;UBERON:0000025!5.04e-11!194;UBERON:0000477!8.67e-08!286;UBERON:0002420!8.99e-08!9;UBERON:0007245!8.99e-08!9;UBERON:0010009!8.99e-08!9;UBERON:0010011!8.99e-08!9;UBERON:0000454!8.99e-08!9;UBERON:0004111!9.64e-08!241;UBERON:0002308!1.06e-07!9;UBERON:0000125!1.06e-07!9;UBERON:0000200!2.39e-07!6;UBERON:0003076!5.75e-07!15;UBERON:0003057!5.75e-07!15;UBERON:0001871!8.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.70e-57;22!UBERON:0001950;7.25e-52;20!UBERON:0000956;1.21e-49;25!UBERON:0000203;1.21e-49;25!UBERON:0001893;3.53e-48;34!UBERON:0001869;4.99e-48;32!UBERON:0003528;1.50e-47;34!UBERON:0002020;1.50e-47;34!UBERON:0002791;2.05e-44;32!UBERON:0000073;5.00e-40;53!UBERON:0002616;5.00e-40;53!UBERON:0002780;1.16e-37;41!UBERON:0001890;1.16e-37;41!UBERON:0000955;8.63e-27;68!UBERON:0001017;2.39e-25;75!UBERON:0001016;6.10e-22;83!UBERON:0000200;3.92e-18;6!UBERON:0004733;1.72e-17;12!UBERON:0002028;1.72e-17;12!UBERON:0002298;3.55e-17;6!UBERON:0004732;5.27e-16;13!UBERON:0001872;4.48e-15;5!UBERON:0001871;6.41e-15;6!UBERON:0000349;8.77e-15;5!UBERON:0002021;2.38e-14;5!UBERON:0007023;1.78e-11;114!UBERON:0002680;8.37e-11;9!UBERON:0001895;8.37e-11;9!UBERON:0001870;7.30e-10;3!UBERON:0000988;7.97e-10;3!UBERON:0001896;4.58e-09;3!UBERON:0005290;4.58e-09;3!UBERON:0011216;1.26e-08;132!UBERON:0002420;6.18e-08;9!UBERON:0007245;6.18e-08;9!UBERON:0010009;6.18e-08;9!UBERON:0010011;6.18e-08;9!UBERON:0000454;6.18e-08;9!UBERON:0000125;7.78e-08;9!UBERON:0002308;7.78e-08;9!UBERON:0010314;1.58e-07;132!UBERON:0001876;4.31e-07;2!UBERON:0002771;4.51e-07;2!UBERON:0002702;5.07e-07;2!UBERON:0000369;5.40e-07;4!UBERON:0002435;5.40e-07;4!UBERON:0000204;5.40e-07;4!UBERON:0002148;6.78e-07;2!UBERON:0006331;6.78e-07;2!UBERON:0009662;6.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.04e-76,56;UBERON:0005068,7.04e-76,56;UBERON:0006241,7.04e-76,56;UBERON:0007135,7.04e-76,56;UBERON:0000073,1.01e-72,53;UBERON:0002616,1.01e-72,53;UBERON:0001017,7.09e-66,81;UBERON:0001016,1.73e-63,89;UBERON:0000955,3.92e-63,68;UBERON:0006238,3.92e-63,68;UBERON:0002619,3.05e-57,22;UBERON:0002780,1.10e-55,41;UBERON:0001890,1.10e-55,41;UBERON:0003080,1.10e-55,41;UBERON:0006240,1.10e-55,41;UBERON:0001893,7.65e-55,34;UBERON:0003528,1.04e-54,34;UBERON:0002020,1.04e-54,34;UBERON:0001869,3.29e-54,32;UBERON:0003075,1.11e-53,82;UBERON:0007284,1.11e-53,82;UBERON:0001950,5.61e-52,20;UBERON:0002346,1.15e-50,86;UBERON:0000956,6.99e-50,25;UBERON:0000203,6.99e-50,25;UBERON:0002791,1.15e-49,32;UBERON:0010371,3.46e-44,104;UBERON:0003056,6.46e-40,61;UBERON:0007023,1.82e-34,114;UBERON:0010314,2.89e-34,132;UBERON:0004121,9.37e-32,171;UBERON:0000924,9.37e-32,171;UBERON:0006601,9.37e-32,171;UBERON:0011216,1.32e-22,223;UBERON:0000025,5.06e-22,192;UBERON:0003076,2.48e-20,15;UBERON:0003057,2.48e-20,15;UBERON:0000200,3.77e-18,6;UBERON:0004733,1.71e-17,12;UBERON:0002028,1.71e-17,12;UBERON:0007277,1.71e-17,12;UBERON:0002298,4.16e-17,6;UBERON:0004732,5.24e-16,13;UBERON:0004111,3.31e-15,240;UBERON:0001872,4.77e-15,5;UBERON:0001871,4.93e-15,6;UBERON:0000349,5.82e-15,5;UBERON:0002021,2.39e-14,5;UBERON:0000483,3.56e-12,306;UBERON:0000119,6.16e-12,309;UBERON:0002680,7.82e-11,9;UBERON:0001895,7.82e-11,9;UBERON:0010092,7.82e-11,9;UBERON:0001870,7.32e-10,3;UBERON:0000988,8.47e-10,3;UBERON:0001896,5.07e-09,3;UBERON:0005290,5.07e-09,3;UBERON:0010096,5.07e-09,3;UBERON:0002420,5.50e-08,9;UBERON:0007245,5.50e-08,9;UBERON:0010009,5.50e-08,9;UBERON:0010011,5.50e-08,9;UBERON:0000454,5.50e-08,9;UBERON:0000125,7.29e-08,9;UBERON:0002308,7.29e-08,9;UBERON:0001876,4.14e-07,2;UBERON:0002771,4.39e-07,2;UBERON:0000369,4.73e-07,4;UBERON:0002435,4.73e-07,4;UBERON:0000204,4.73e-07,4;UBERON:0010082,4.73e-07,4;UBERON:0002702,5.08e-07,2;UBERON:0002148,7.20e-07,2;UBERON:0006331,7.20e-07,2;UBERON:0009662,7.20e-07,2;UBERON:0001954,7.84e-07,2;UBERON:0003022,7.84e-07,2;UBERON:0002421,7.84e-07,2;UBERON:0002600,7.84e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0.77408061658038,0,0,0,0.232401601740905,0.426507697462265,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.673971786878971,0.300353785683013,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,1.76171156811282,0.382273228125229,0,0,0,0,0.786021525498329,0.616804496998528,0,0.977766799900771,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,1.03800594213442,0.267540828089713,0,0,0.383220493601921,0.68725489096526,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0,0,0,0.289693037921647,0,0,0,0,0,1.44076983047484,0,0,0,0,0,1.66943437013739,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.975789649036763,0.530119073285941,1.16193942869518,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0.414656231081544,0.144119953416961,0.37872730027914,0.190493682876507,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.513372145118994,0,2.60279707715243,0.773288812777695,1.34013012267479,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.853820462427555,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0.41254749960294,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,1.06461206063404,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,3.17020642346017,0.421258456238981,0,0.731140468893853,1.05650146756755,0,0,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0.159426272728822,0.399158742865633,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,15.9063623642608,3.37606599385231,0,0,0.63337622438398,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,6.78532922266653,7.79252024559551,0,0,0.0874599999961957,0,0.1137934482855,0,0,0.689486746482929,1.16641845353302,0,2.65722415744152,0.844175070377856,1.52581736317083,1.21637185924347,2.36438095162838,7.89787429754301,0.10893846351899,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,2.04386596391473,0.156980256395025,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,3.16785325009182,0,8.43352004611221,0.547364367646998,0.19566461893209,0,0.394584402849391,0,1.53036380815245,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0.264768380074501,3.16373037092745,0,0,11.5225648639699,0,0.0801588202515337,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0.273810757783986,0,0.429765441419957,0.262887354279314,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.403100834920358,0.720599767084807,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,11.9284453471395,1.90684768556206,0,0.137539436597234,0.415440338029185,1.1248694577575,0,10.8741706417864,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,6.33486486171598,4.23144325576608,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,10.7383113113728,5.13282815896649,1.14681839138014,2.88415533995816,10.5563885000352,0.415045904808692,0,0.303298235083296,0.285465333544967,0,2.34167452903441,1.01444720027578,0,0,0.554805861502613,0.189403005275089,0,0,0,0.453692771289717,1.39893480524502,0.295710299979268,0.318593534327405,0,0,1.24411862352257,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,5.66859588222096,0,0,0.163565394255844,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,1.15104934173287,0.754773679776773,0.471797825567689,1.09209638192014,0.33946505990805,0.637724760305049,0.495743057036009,0,0,0,3.20228299314188,0,0.3062454773532,7.32213166099639,7.08482881627925,1.27707087245721,9.23023639083397,1.26035848110859,13.55482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| ||
|short_description=p3@RAB3A | |short_description=p3@RAB3A | ||
}} | }} |
Latest revision as of 14:48, 16 September 2015
Short description: | p3@RAB3A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB3A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 28bp_to_ENST00000481914_5end |
EntrezGene: | RAB3A |
HGNC: | 9777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data