FFCP PHASE1:Hg19::chr7:138458662..138458715,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50617 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=866 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBG4,A4D1R4,Q32M47 | |||
|association_with_transcript=66bp_to_ENST00000393054,NM_130841,uc003vuf.2_5end | |||
|cluster_id=chr7:138458662..138458715,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_1_at_ATP6V0A4_5end | |||
|id=chr7:138458662..138458715,- | |||
|ontology_enrichment_celltype=CL:0000039!1.98e-19!7;CL:0000586!1.98e-19!7;CL:0002322!1.62e-13!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.64e-21;7!CL:0000586;1.64e-21;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.22e-21,7;CL:0000586,1.22e-21,7 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.05e-07;1!UBERON:0008801;2.37e-07;1!UBERON:0000358;3.41e-07;1!UBERON:0005754;5.34e-07;1 | |||
|ontology_enrichment_disease=DOID:5093!3.23e-07!4;DOID:1612!3.23e-07!4;DOID:3095!7.84e-07!22;DOID:2994!7.84e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.30e-14;4!DOID:1612;5.30e-14;4!DOID:178;1.49e-07;1!DOID:326;1.49e-07;1!DOID:3978;1.49e-07;1!DOID:3394;1.49e-07;1!DOID:5844;1.49e-07;1!DOID:0050619;1.74e-07;1!DOID:1357;1.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.31e-14,4;DOID:1612,5.31e-14,4;DOID:178,1.54e-07,1;DOID:326,1.54e-07,1;DOID:3978,1.54e-07,1;DOID:3394,1.54e-07,1;DOID:5844,1.54e-07,1;DOID:0050619,1.85e-07,1;DOID:1357,1.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!6.21e-15!11;UBERON:0000473!5.32e-12!8;UBERON:0003101!2.61e-10!22;UBERON:0000079!2.61e-10!22;UBERON:0007023!4.87e-08!115;UBERON:0000166!2.28e-07!21;UBERON:0001829!4.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.25e-13;2!UBERON:0003135;2.62e-13;11!UBERON:0003127;1.59e-12;2!UBERON:0000473;4.73e-12;8!UBERON:0001044;6.16e-10;6!UBERON:0003293;6.16e-10;6!UBERON:0003294;6.16e-10;6!UBERON:0010047;6.16e-10;6!UBERON:0003408;6.16e-10;6!UBERON:0000167;6.16e-10;6!UBERON:0006947;1.08e-08;3!UBERON:0004054;1.08e-08;3!UBERON:0001723;1.62e-08;3!UBERON:0001033;1.62e-08;3!UBERON:0001736;1.05e-07;1!UBERON:0002372;1.74e-07;1!UBERON:0001764;1.74e-07;1!UBERON:0001961;1.74e-07;1!UBERON:0001825;1.74e-07;1!UBERON:0001744;1.74e-07;1!UBERON:0001042;1.74e-07;1!UBERON:0001735;1.74e-07;1!UBERON:0001831;2.37e-07;1!UBERON:0001567;2.37e-07;1!UBERON:0001000;2.84e-07;1!UBERON:0005352;2.84e-07;1!UBERON:0000165;3.26e-07;28!UBERON:0007029;5.34e-07;1!UBERON:0000998;5.34e-07;1!UBERON:0006868;5.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.26e-13,2;UBERON:0003135,2.40e-13,11;UBERON:0003127,1.74e-12,2;UBERON:0000473,4.41e-12,8;UBERON:0001044,6.16e-10,6;UBERON:0003293,6.16e-10,6;UBERON:0003294,6.16e-10,6;UBERON:0010047,6.16e-10,6;UBERON:0000167,6.16e-10,6;UBERON:0000166,2.26e-09,22;UBERON:0006947,1.19e-08,3;UBERON:0004054,1.19e-08,3;UBERON:0001723,1.39e-08,3;UBERON:0001033,1.39e-08,3;UBERON:0010056,1.39e-08,3;UBERON:0001736,1.06e-07,1;UBERON:0006298,1.06e-07,1;UBERON:0002372,1.63e-07,1;UBERON:0001961,1.63e-07,1;UBERON:0001744,1.63e-07,1;UBERON:0001735,1.63e-07,1;UBERON:0001764,1.85e-07,1;UBERON:0001825,1.85e-07,1;UBERON:0001831,2.37e-07,1;UBERON:0001567,2.37e-07,1;UBERON:0008801,2.37e-07,1;UBERON:0001000,2.67e-07,1;UBERON:0005352,2.67e-07,1;UBERON:0000165,5.72e-07,29;UBERON:0000930,5.72e-07,29;UBERON:0007029,5.84e-07,1;UBERON:0000998,6.57e-07,1;UBERON:0006868,6.57e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25681995367566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,1.59035721985782,0.580969714347592,0.621966330092223,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.576479813667846,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20855522170466,0,0.724999575434793,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,4.84184199214926,0.359030577639089,15.9711636725352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,3.94584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58619702145662,0,0,0,0,12.8145544480199,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0,0,16.9432270693276,6.66173269314476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,12.6866704017001,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,7.38154252376101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38606213485746,0.496211178389294,0,0,0,0,0,0.227662191351298,0.887023701626388,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,40.4413717291061,0,0,1.27016115057279,0,0,0,0,0.196300467230486,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5602763200134,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,7.64916223064863,8.8181743737635,1.8378979906969,0.50141507858475,0.0757786982182394,0,0,0,3.19850972851471,0.952257725854961,0,0.124149428591716,0,0,0,1.52401723527873,1.71116650542641,7.74548609667757,2.94061042109973,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p1@ATP6V0A4 | |||
}} |
Latest revision as of 15:17, 16 September 2015
Short description: | p1@ATP6V0A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP6V0A4_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 66bp_to_ENST00000393054, NM_130841, uc003vuf.2_5end |
EntrezGene: | ATP6V0A4 |
HGNC: | 866 |
UniProt: | Q9HBG4A4D1R4Q32M47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.22e-21 | 7 |
germ cell | 1.22e-21 | 7 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.26e-13 | 2 |
male reproductive organ | 2.40e-13 | 11 |
open tracheal system trachea | 1.74e-12 | 2 |
testis | 4.41e-12 | 8 |
saliva-secreting gland | 6.16e-10 | 6 |
gland of oral region | 6.16e-10 | 6 |
gland of foregut | 6.16e-10 | 6 |
oral gland | 6.16e-10 | 6 |
oral cavity | 6.16e-10 | 6 |
oral opening | 2.26e-09 | 22 |
male genital duct | 1.19e-08 | 3 |
internal male genitalia | 1.19e-08 | 3 |
tongue | 1.39e-08 | 3 |
gustatory system | 1.39e-08 | 3 |
future tongue | 1.39e-08 | 3 |
submandibular gland | 1.06e-07 | 1 |
submandibular gland primordium | 1.06e-07 | 1 |
tonsil | 1.63e-07 | 1 |
mucosa-associated lymphoid tissue | 1.63e-07 | 1 |
lymphoid tissue | 1.63e-07 | 1 |
tonsillar ring | 1.63e-07 | 1 |
maxillary sinus | 1.85e-07 | 1 |
paranasal sinus | 1.85e-07 | 1 |
parotid gland | 2.37e-07 | 1 |
cheek | 2.37e-07 | 1 |
parotid gland primordium | 2.37e-07 | 1 |
vas deferens | 2.67e-07 | 1 |
spermatic cord | 2.67e-07 | 1 |
mouth | 5.72e-07 | 29 |
stomodeum | 5.72e-07 | 29 |
surface | 5.84e-07 | 1 |
seminal vesicle | 6.57e-07 | 1 |
seminal fluid secreting gland | 6.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.31e-14 | 4 |
breast cancer | 5.31e-14 | 4 |
vascular disease | 1.54e-07 | 1 |
ischemia | 1.54e-07 | 1 |
extrinsic cardiomyopathy | 1.54e-07 | 1 |
myocardial ischemia | 1.54e-07 | 1 |
myocardial infarction | 1.54e-07 | 1 |
paranasal sinus cancer | 1.85e-07 | 1 |
maxillary sinus cancer | 1.85e-07 | 1 |