FFCP PHASE1:Hg19::chr3:170075103..170075114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6498 | |EntrezGene=6498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10897 | |HGNC=10897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-351bp_to_ENST00000477216_5end | |association_with_transcript=-351bp_to_ENST00000477216_5end | ||
|cluster_id=chr3:170075103..170075114,+ | |||
|description=CAGE_peak_5_at_SKIL_5end | |description=CAGE_peak_5_at_SKIL_5end | ||
|id=chr3:170075103..170075114,+ | |id=chr3:170075103..170075114,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.08e-16!45;CL:0002057!1.39e-16!42;CL:0002194!3.08e-13!63;CL:0000576!3.08e-13!63;CL:0000040!3.08e-13!63;CL:0000559!3.08e-13!63;CL:0000766!3.67e-12!76;CL:0002009!5.93e-12!65;CL:0000839!1.81e-11!70;CL:0000557!3.06e-10!71 | |ontology_enrichment_celltype=CL:0000860!1.08e-16!45;CL:0002057!1.39e-16!42;CL:0002194!3.08e-13!63;CL:0000576!3.08e-13!63;CL:0000040!3.08e-13!63;CL:0000559!3.08e-13!63;CL:0000766!3.67e-12!76;CL:0002009!5.93e-12!65;CL:0000839!1.81e-11!70;CL:0000557!3.06e-10!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-35;33!CL:0002057;2.10e-35;33!CL:0000473;5.56e-25;39!CL:0000234;5.56e-25;39!CL:0000576;6.02e-20;48!CL:0000766;2.49e-10;69!CL:0002322;1.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-32,42;CL:0002057,2.90e-32,42;CL:0000473,1.09e-28,48;CL:0000234,1.09e-28,48;CL:0002194,1.60e-23,59;CL:0000576,1.60e-23,59;CL:0000040,1.60e-23,59;CL:0000559,1.60e-23,59;CL:0002009,2.26e-22,61;CL:0000766,2.61e-21,72;CL:0000839,8.19e-20,66;CL:0000557,2.39e-19,67;CL:0002087,9.53e-11,115;CL:0000763,2.43e-10,108;CL:0000049,2.43e-10,108;CL:0000738,2.27e-09,136;CL:0002031,3.08e-09,120;CL:0002322,6.81e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.94e-24;42 | |||
|ontology_enrichment_disease=DOID:305!8.35e-07!106 | |ontology_enrichment_disease=DOID:305!8.35e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.97e-09!102;UBERON:0003061!1.97e-09!102;UBERON:0002371!8.45e-09!80;UBERON:0002405!7.45e-08!115;UBERON:0001474!7.95e-08!86;UBERON:0002193!9.26e-08!112 | |ontology_enrichment_uberon=UBERON:0002390!1.97e-09!102;UBERON:0003061!1.97e-09!102;UBERON:0002371!8.45e-09!80;UBERON:0002405!7.45e-08!115;UBERON:0001474!7.95e-08!86;UBERON:0002193!9.26e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.22e-07;10!UBERON:0000158;2.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.82e-18,76;UBERON:0001474,9.74e-16,82;UBERON:0002390,1.48e-15,98;UBERON:0003061,1.48e-15,98;UBERON:0004765,3.79e-14,90;UBERON:0002193,1.08e-13,108;UBERON:0002405,2.56e-13,93;UBERON:0001434,1.29e-11,100;UBERON:0005631,9.46e-08,14;UBERON:0000158,9.46e-08,14;UBERON:0003081,5.05e-07,203 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,0.783556884599516,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0.369363174230364,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.246301768349837,0.629686250509434,0,0.767658796194425,0.309632246632152,0,0.30120591877825,0.739508020333575,0.542270404062111,0.142169232487422,0.293600439334847,2.21598163412751,1.20326668482085,0.651032612147555,1.11957737119962,0.32389366601898,2.57575567634187,2.76256653681173,3.77875943688809,2.18325655069035,3.71886459049095,4.11167888021826,3.71647645074124,3.74000110018796,3.33008918487831,2.36482229888585,2.75796544589295,3.22742341791913,4.06279459783025,3.57660445130949,4.63940455098338,4.71919317334678,3.36692281607993,7.06043859567406,5.11469700639233,4.94776950280074,1.59570926097305,2.55734850319616,7.2552309657146,7.37600792098482,8.71951148593805,2.26123798731069,3.12889751052121,2.38907729175628,4.23779651843358,8.83866326370155,6.0127853613768,0,0,0.419317291016752,0.44931452458598,0.300353785683013,0.16072558669708,0.570025487482497,0.59675003159727,0.365328307529268,0,0.546138611262131,0,1.28019066769952,0.400395987036012,0,1.32208974556972,1.90810750907073,0,0,0,1.32171328579026,0.560508562981536,0.526768169550154,0,0,0.205601498999509,0.167186495390678,0.651844533267181,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0,0.390178042679635,0.164437904603676,0.552700035571697,0.579606171470105,0.14828656316206,0.535081656179426,0,0,0.766440987203842,0,0,0,0,0,0.602300476311091,0.383959833463255,1.24930726552346,0,0,0.201606743224732,0,0,2.43806866313962,0,0,0,0.50133791063589,0.434539556882471,0.795285947051099,0,0.850813354476611,0.221729397462564,0.87834785693126,0.196468613246569,0,0,0,0,0.132957960518865,0.238490624305342,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0,1.00416183829401,0,0,0.24406205754817,0,0,0.267899184852239,0,0.337834441449967,0,0,0.366403487860815,13.1780417436063,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0,0.560677600142307,0,0.49333509683432,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0.612975591598039,0,0,0.538168907066586,0.427114777637135,0,0.300091096084402,0.412210116953756,0,0.744467425326359,0.168776332241266,0.487185025805993,0.252433774244115,0.460249493211497,0.323292113637624,0.355009592516614,0.403008392910561,0.508681776931463,1.54608682530637,0.545492241181669,0.573609190778008,3.65921118388786,2.51806559810822,1.97529702878181,2.38420426535352,2.27088765788066,2.18986415445498,0,0.643240938192885,0,0.928735856063958,0,0.118306800039844,0.842923450390509,0.723033089650446,0.441175890929576,0.435758888184812,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.122988438543114,0.343135620597051,0.329250856225877,0,0.301586917234893,0.555530670951178,0,0,0,0.579652024875384,0.821860859650752,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0.984868024349589,0.234004265139238,0.743155811443641,0,1.00789276919316,0.850650583454319,0.716468181622786,0.871901815541886,0.383382679165211,0,0.528290604079356,0.207328115540772,0.288239906833923,0.25248486685276,0.317489471460845,0,0,0,0.102827492703324,0,0.285826432630578,0.448524337381443,0.43596006883328,0.66004457238855,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0.257207374262142,1.41849132023278,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0.710783897485092,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0.502257091432126,2.10833939483032,0.718874566474748,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0.358121926479791,0.336255431980582,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0,2.55175500661265,1.49801404789436,2.99161459204025,0.414415513436035,0.12269149171914,0.500170521059677,0,1.03985430765404,0.535286966391485,0.315404830067869,0.234282829985426,0,0,0,0,0,0.434418072340414,0.391602314925481,0.343143423810856,0.413536052245775,1.07857100409308,0.74709290462411,1.81876542867756,0,0.604780586659361,0,0.61384789315225,0,1.15325234330131,0,0.321707842287215,0,0.462629081407967,0.177561725313127,0.328508624055237,0,0.697262270759755,0.604297247958111,0.601519410909855,1.38121483403844,0.114814448164607,0,0.262248829918848,0.902399225814824,1.00119938235739,0.784349769176855,0,1.16106791782163,0,0,0.647747748306418,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0.328014645699706,0,2.47298427954533,0.457847324091717,0.247528499761764,0,0,1.6068392984416,0.096670718292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| ||
|short_description=p5@SKIL | |short_description=p5@SKIL | ||
}} | }} |
Latest revision as of 15:56, 16 September 2015
Short description: | p5@SKIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SKIL_5end |
Coexpression cluster: | NA |
Association with transcript: | -351bp_to_ENST00000477216_5end |
EntrezGene: | SKIL |
HGNC: | 10897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.90e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-32 | 42 |
defensive cell | 1.09e-28 | 48 |
phagocyte | 1.09e-28 | 48 |
monopoietic cell | 1.60e-23 | 59 |
monocyte | 1.60e-23 | 59 |
monoblast | 1.60e-23 | 59 |
promonocyte | 1.60e-23 | 59 |
macrophage dendritic cell progenitor | 2.26e-22 | 61 |
myeloid leukocyte | 2.61e-21 | 72 |
myeloid lineage restricted progenitor cell | 8.19e-20 | 66 |
granulocyte monocyte progenitor cell | 2.39e-19 | 67 |
nongranular leukocyte | 9.53e-11 | 115 |
myeloid cell | 2.43e-10 | 108 |
common myeloid progenitor | 2.43e-10 | 108 |
leukocyte | 2.27e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 3.08e-09 | 120 |
embryonic stem cell | 6.81e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.82e-18 | 76 |
bone element | 9.74e-16 | 82 |
hematopoietic system | 1.48e-15 | 98 |
blood island | 1.48e-15 | 98 |
skeletal element | 3.79e-14 | 90 |
hemolymphoid system | 1.08e-13 | 108 |
immune system | 2.56e-13 | 93 |
skeletal system | 1.29e-11 | 100 |
extraembryonic membrane | 9.46e-08 | 14 |
membranous layer | 9.46e-08 | 14 |
lateral plate mesoderm | 5.05e-07 | 203 |