FFCP PHASE1:Hg19::chr2:119699790..119699805,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:119699790..119699805,+
|short_description=p3@MARCO
|description=CAGE_peak_3_at_MARCO_5end
|association_with_transcript=-13bp_to_ENST00000410021_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8685 | |EntrezGene=8685 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6895 | |HGNC=6895 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZ64 | |UniProt=B8ZZ64 | ||
|association_with_transcript=-13bp_to_ENST00000410021_5end | |||
|cluster_id=chr2:119699790..119699805,+ | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_3_at_MARCO_5end | |||
|id=chr2:119699790..119699805,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.05e-49!63;CL:0000576!1.05e-49!63;CL:0000040!1.05e-49!63;CL:0000559!1.05e-49!63;CL:0002009!1.12e-47!65;CL:0002057!3.12e-44!42;CL:0000839!4.15e-43!70;CL:0000557!2.84e-42!71;CL:0000860!2.10e-40!45;CL:0000766!2.38e-40!76;CL:0002087!3.87e-24!119;CL:0000763!3.00e-23!112;CL:0000049!3.00e-23!112;CL:0002031!2.48e-19!124;CL:0000738!4.64e-19!140;CL:0000037!3.14e-13!172;CL:0000566!3.14e-13!172;CL:0002032!3.03e-12!165;CL:0000837!3.03e-12!165;CL:0000988!1.14e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.13e-51;39!CL:0000234;1.13e-51;39!CL:0000860;1.31e-43;33!CL:0002057;1.31e-43;33!CL:0000576;3.41e-32;48!CL:0000766;7.40e-23;69!CL:0000235;6.91e-21;6!CL:0000763;2.16e-12;100!CL:0002619;4.45e-11;3!CL:0002087;1.83e-09;104!CL:0000738;6.93e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.17e-64,48;CL:0000234,1.17e-64,48;CL:0002194,1.77e-64,59;CL:0000576,1.77e-64,59;CL:0000040,1.77e-64,59;CL:0000559,1.77e-64,59;CL:0002009,4.40e-62,61;CL:0000839,1.02e-56,66;CL:0000557,9.65e-56,67;CL:0000766,3.06e-54,72;CL:0000860,1.12e-47,42;CL:0002057,1.12e-47,42;CL:0000763,4.67e-33,108;CL:0000049,4.67e-33,108;CL:0002087,1.79e-30,115;CL:0002031,4.32e-27,120;CL:0000738,7.55e-26,136;CL:0000235,7.71e-21,6;CL:0000037,4.29e-19,168;CL:0002032,4.50e-19,161;CL:0000837,4.50e-19,161;CL:0000988,1.22e-17,177;CL:0002619,3.72e-11,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-34;42!CL:0000049;2.33e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.07e-35!80;UBERON:0002390!1.99e-35!102;UBERON:0003061!1.99e-35!102;UBERON:0002193!1.93e-33!112;UBERON:0001474!4.33e-32!86;UBERON:0002405!2.61e-31!115;UBERON:0007023!1.47e-27!115;UBERON:0004765!1.89e-27!101;UBERON:0001434!1.89e-27!101;UBERON:0003081!3.53e-16!216;UBERON:0002204!6.03e-14!167;UBERON:0000062!2.69e-11!511;UBERON:0000926!2.86e-09!448;UBERON:0004120!2.86e-09!448;UBERON:0006603!2.86e-09!448;UBERON:0000467!8.25e-09!625;UBERON:0000480!9.56e-09!626;UBERON:0000468!2.93e-08!659;UBERON:0000923!6.93e-07!604;UBERON:0005291!6.93e-07!604;UBERON:0006598!6.93e-07!604;UBERON:0002532!6.93e-07!604;UBERON:0002050!7.91e-07!605;UBERON:0005423!7.91e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.37e-48,76;UBERON:0001474,6.61e-44,82;UBERON:0002405,1.71e-42,93;UBERON:0002390,8.03e-42,98;UBERON:0003061,8.03e-42,98;UBERON:0002193,2.18e-39,108;UBERON:0004765,3.41e-39,90;UBERON:0001434,2.35e-34,100;UBERON:0002204,5.00e-18,167;UBERON:0003081,2.56e-17,203;UBERON:0000926,1.23e-09,315;UBERON:0004120,1.23e-09,315;UBERON:0006603,1.23e-09,315;UBERON:0001829,3.38e-07,2 | |||
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| ||
|short_description=p3@MARCO | |||
}} | }} |
Latest revision as of 16:27, 16 September 2015
Short description: | p3@MARCO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MARCO_5end |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | -13bp_to_ENST00000410021_5end |
EntrezGene: | MARCO |
HGNC: | 6895 |
UniProt: | B8ZZ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.17e-64 | 48 |
phagocyte | 1.17e-64 | 48 |
monopoietic cell | 1.77e-64 | 59 |
monocyte | 1.77e-64 | 59 |
monoblast | 1.77e-64 | 59 |
promonocyte | 1.77e-64 | 59 |
macrophage dendritic cell progenitor | 4.40e-62 | 61 |
myeloid lineage restricted progenitor cell | 1.02e-56 | 66 |
granulocyte monocyte progenitor cell | 9.65e-56 | 67 |
myeloid leukocyte | 3.06e-54 | 72 |
classical monocyte | 1.12e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-47 | 42 |
myeloid cell | 4.67e-33 | 108 |
common myeloid progenitor | 4.67e-33 | 108 |
nongranular leukocyte | 1.79e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 4.32e-27 | 120 |
leukocyte | 7.55e-26 | 136 |
macrophage | 7.71e-21 | 6 |
hematopoietic stem cell | 4.29e-19 | 168 |
hematopoietic oligopotent progenitor cell | 4.50e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.50e-19 | 161 |
hematopoietic cell | 1.22e-17 | 177 |
adult endothelial progenitor cell | 3.72e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.37e-48 | 76 |
bone element | 6.61e-44 | 82 |
immune system | 1.71e-42 | 93 |
hematopoietic system | 8.03e-42 | 98 |
blood island | 8.03e-42 | 98 |
hemolymphoid system | 2.18e-39 | 108 |
skeletal element | 3.41e-39 | 90 |
skeletal system | 2.35e-34 | 100 |
musculoskeletal system | 5.00e-18 | 167 |
lateral plate mesoderm | 2.56e-17 | 203 |
mesoderm | 1.23e-09 | 315 |
mesoderm-derived structure | 1.23e-09 | 315 |
presumptive mesoderm | 1.23e-09 | 315 |
major salivary gland | 3.38e-07 | 2 |