FFCP PHASE1:Hg19::chr10:121302195..121302245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6001 | |EntrezGene=6001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9992 | |HGNC=9992 | ||
|TSSclassifier=strong | |||
|UniProt=O43665 | |UniProt=O43665 | ||
|association_with_transcript=0bp_to_ENST00000369103,NM_001005339,uc001leg.2_5end | |association_with_transcript=0bp_to_ENST00000369103,NM_001005339,uc001leg.2_5end | ||
|cluster_id=chr10:121302195..121302245,- | |||
|description=CAGE_peak_1_at_RGS10_5end | |description=CAGE_peak_1_at_RGS10_5end | ||
|id=chr10:121302195..121302245,- | |id=chr10:121302195..121302245,- | ||
|ontology_enrichment_celltype=CL:0000037!5.52e-22!172;CL:0000566!5.52e-22!172;CL:0000988!1.00e-21!182;CL:0000738!3.39e-21!140;CL:0002031!1.18e-20!124;CL:0002032!2.09e-20!165;CL:0000837!2.09e-20!165;CL:0002371!5.07e-20!591;CL:0002087!1.16e-17!119;CL:0000003!1.60e-16!722;CL:0000839!3.45e-16!70;CL:0000723!5.03e-16!436;CL:0000557!6.28e-16!71;CL:0000048!7.54e-16!430;CL:0000763!1.03e-15!112;CL:0000049!1.03e-15!112;CL:0002320!1.12e-15!365;CL:0000144!1.13e-15!625;CL:0000034!3.64e-15!444;CL:0002009!4.93e-14!65;CL:0000766!6.69e-14!76;CL:0000134!9.19e-14!358;CL:0002194!5.60e-13!63;CL:0000576!5.60e-13!63;CL:0000040!5.60e-13!63;CL:0000559!5.60e-13!63;CL:0000219!7.89e-12!390;CL:0002057!2.21e-10!42;CL:0000012!9.11e-10!682;CL:0000548!3.04e-09!679;CL:0000004!3.04e-09!679;CL:0000255!3.04e-09!679;CL:0000791!4.74e-09!18;CL:0000789!4.74e-09!18;CL:0002420!4.74e-09!18;CL:0002419!4.74e-09!18;CL:0000790!4.74e-09!18;CL:0000860!3.44e-08!45;CL:0000183!7.15e-07!59 | |ontology_enrichment_celltype=CL:0000037!5.52e-22!172;CL:0000566!5.52e-22!172;CL:0000988!1.00e-21!182;CL:0000738!3.39e-21!140;CL:0002031!1.18e-20!124;CL:0002032!2.09e-20!165;CL:0000837!2.09e-20!165;CL:0002371!5.07e-20!591;CL:0002087!1.16e-17!119;CL:0000003!1.60e-16!722;CL:0000839!3.45e-16!70;CL:0000723!5.03e-16!436;CL:0000557!6.28e-16!71;CL:0000048!7.54e-16!430;CL:0000763!1.03e-15!112;CL:0000049!1.03e-15!112;CL:0002320!1.12e-15!365;CL:0000144!1.13e-15!625;CL:0000034!3.64e-15!444;CL:0002009!4.93e-14!65;CL:0000766!6.69e-14!76;CL:0000134!9.19e-14!358;CL:0002194!5.60e-13!63;CL:0000576!5.60e-13!63;CL:0000040!5.60e-13!63;CL:0000559!5.60e-13!63;CL:0000219!7.89e-12!390;CL:0002057!2.21e-10!42;CL:0000012!9.11e-10!682;CL:0000548!3.04e-09!679;CL:0000004!3.04e-09!679;CL:0000255!3.04e-09!679;CL:0000791!4.74e-09!18;CL:0000789!4.74e-09!18;CL:0002420!4.74e-09!18;CL:0002419!4.74e-09!18;CL:0000790!4.74e-09!18;CL:0000860!3.44e-08!45;CL:0000183!7.15e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.87e-09;18!CL:0000789;4.87e-09;18!CL:0002419;4.87e-09;18!CL:0000473;5.46e-08;39!CL:0000234;5.46e-08;39!CL:0000766;1.60e-07;69!CL:0000576;1.93e-07;48!CL:0000860;2.97e-07;33!CL:0002057;2.97e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.22e-23,168;CL:0000988,6.81e-23,177;CL:0000738,9.21e-23,136;CL:0002031,2.51e-22,120;CL:0002032,9.03e-22,161;CL:0000837,9.03e-22,161;CL:0002087,3.35e-19,115;CL:0000839,2.62e-18,66;CL:0000557,5.31e-18,67;CL:0000763,3.42e-17,108;CL:0000049,3.42e-17,108;CL:0000723,3.54e-17,433;CL:0000048,5.34e-17,427;CL:0002320,1.42e-16,361;CL:0000034,2.79e-16,441;CL:0002009,4.79e-16,61;CL:0000766,1.11e-15,72;CL:0002194,6.39e-15,59;CL:0000576,6.39e-15,59;CL:0000040,6.39e-15,59;CL:0000559,6.39e-15,59;CL:0000134,1.33e-14,354;CL:0000473,9.93e-13,48;CL:0000234,9.93e-13,48;CL:0000219,1.42e-12,386;CL:0000860,2.21e-10,42;CL:0002057,2.21e-10,42;CL:0000791,4.74e-09,18;CL:0000789,4.74e-09,18;CL:0002420,4.74e-09,18;CL:0002419,4.74e-09,18;CL:0000790,4.74e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.87e-09;18!CL:0002057;8.15e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.90e-21!102;UBERON:0003061!3.90e-21!102;UBERON:0002193!5.53e-18!112;UBERON:0002204!9.82e-18!167;UBERON:0003081!3.05e-16!216;UBERON:0002371!2.63e-15!80;UBERON:0002384!2.54e-14!375;UBERON:0004765!6.72e-14!101;UBERON:0001434!6.72e-14!101;UBERON:0001474!1.77e-13!86;UBERON:0002405!8.49e-08!115;UBERON:0000486!1.21e-07!82;UBERON:0000914!1.23e-07!83;UBERON:0002329!1.23e-07!83;UBERON:0003077!1.23e-07!83;UBERON:0003059!1.23e-07!83;UBERON:0007282!1.23e-07!83;UBERON:0009618!1.23e-07!83;UBERON:0007285!1.23e-07!83;UBERON:0000178!3.86e-07!15;UBERON:0000179!3.86e-07!15;UBERON:0000463!3.86e-07!15;UBERON:0004290!8.13e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.82e-07;15!UBERON:0000179;3.82e-07;15!UBERON:0000463;3.82e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.33e-23,98;UBERON:0003061,4.33e-23,98;UBERON:0002204,2.00e-20,167;UBERON:0002193,1.30e-19,108;UBERON:0004765,2.90e-17,90;UBERON:0002371,3.77e-17,76;UBERON:0001434,1.73e-16,100;UBERON:0003081,8.63e-16,203;UBERON:0000926,1.28e-15,315;UBERON:0004120,1.28e-15,315;UBERON:0006603,1.28e-15,315;UBERON:0002384,3.65e-15,371;UBERON:0001474,4.52e-15,82;UBERON:0002405,2.90e-14,93;UBERON:0000486,6.52e-08,83;UBERON:0000178,3.86e-07,15;UBERON:0000179,3.86e-07,15;UBERON:0000463,3.86e-07,15;UBERON:0002329,4.38e-07,71;UBERON:0003059,4.38e-07,71;UBERON:0007282,4.38e-07,71;UBERON:0004290,4.38e-07,71;UBERON:0009618,4.38e-07,71;UBERON:0007524,5.73e-07,73 | |||
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|short_description=p1@RGS10 | |short_description=p1@RGS10 | ||
}} | }} |
Latest revision as of 17:41, 16 September 2015
Short description: | p1@RGS10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369103, NM_001005339, uc001leg.2_5end |
EntrezGene: | RGS10 |
HGNC: | 9992 |
UniProt: | O43665 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.33e-23 | 98 |
blood island | 4.33e-23 | 98 |
musculoskeletal system | 2.00e-20 | 167 |
hemolymphoid system | 1.30e-19 | 108 |
skeletal element | 2.90e-17 | 90 |
bone marrow | 3.77e-17 | 76 |
skeletal system | 1.73e-16 | 100 |
lateral plate mesoderm | 8.63e-16 | 203 |
mesoderm | 1.28e-15 | 315 |
mesoderm-derived structure | 1.28e-15 | 315 |
presumptive mesoderm | 1.28e-15 | 315 |
connective tissue | 3.65e-15 | 371 |
bone element | 4.52e-15 | 82 |
immune system | 2.90e-14 | 93 |
multilaminar epithelium | 6.52e-08 | 83 |
blood | 3.86e-07 | 15 |
haemolymphatic fluid | 3.86e-07 | 15 |
organism substance | 3.86e-07 | 15 |
somite | 4.38e-07 | 71 |
presomitic mesoderm | 4.38e-07 | 71 |
presumptive segmental plate | 4.38e-07 | 71 |
dermomyotome | 4.38e-07 | 71 |
trunk paraxial mesoderm | 4.38e-07 | 71 |
dense mesenchyme tissue | 5.73e-07 | 73 |