FFCP PHASE1:Hg19::chr20:47538357..47538362,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10564 | |EntrezGene=10564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15853 | |HGNC=15853 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6D5 | |UniProt=Q9Y6D5 | ||
|association_with_transcript=-64bp_to_ENST00000371917_5end | |association_with_transcript=-64bp_to_ENST00000371917_5end | ||
|cluster_id=chr20:47538357..47538362,+ | |||
|description=CAGE_peak_5_at_ARFGEF2_5end | |description=CAGE_peak_5_at_ARFGEF2_5end | ||
|id=chr20:47538357..47538362,+ | |id=chr20:47538357..47538362,+ | ||
|ontology_enrichment_celltype=CL:0000860!9.28e-12!45;CL:0002057!2.27e-11!42;CL:0000839!2.80e-08!70;CL:0000557!6.39e-08!71 | |ontology_enrichment_celltype=CL:0000860!9.28e-12!45;CL:0002057!2.27e-11!42;CL:0000839!2.80e-08!70;CL:0000557!6.39e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-12;33!CL:0002057;1.11e-12;33!CL:0000097;1.65e-09;5!CL:0000473;2.05e-09;39!CL:0000234;2.05e-09;39!CL:0000576;7.40e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.70e-11,42;CL:0002057,1.70e-11,42;CL:0000839,1.85e-11,66;CL:0000557,2.83e-11,67;CL:0000766,2.01e-10,72;CL:0000473,5.63e-10,48;CL:0000234,5.63e-10,48;CL:0000097,2.17e-09,5;CL:0002028,2.17e-09,5;CL:0002194,7.61e-08,59;CL:0000576,7.61e-08,59;CL:0000040,7.61e-08,59;CL:0000559,7.61e-08,59;CL:0002009,1.43e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;7.74e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.05e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!9.79e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;7.74e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,8.17e-15,90;UBERON:0001474,1.19e-13,82;UBERON:0001434,3.57e-13,100;UBERON:0002371,3.61e-12,76;UBERON:0002405,8.02e-12,93;UBERON:0007195,8.64e-12,1;UBERON:0002193,5.62e-10,108;UBERON:0002390,3.71e-09,98;UBERON:0003061,3.71e-09,98;UBERON:0002204,1.33e-08,167 | |||
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| ||
|short_description=p5@ARFGEF2 | |short_description=p5@ARFGEF2 | ||
}} | }} |
Latest revision as of 18:12, 16 September 2015
Short description: | p5@ARFGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARFGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000371917_5end |
EntrezGene: | ARFGEF2 |
HGNC: | 15853 |
UniProt: | Q9Y6D5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.70e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.70e-11 | 42 |
myeloid lineage restricted progenitor cell | 1.85e-11 | 66 |
granulocyte monocyte progenitor cell | 2.83e-11 | 67 |
myeloid leukocyte | 2.01e-10 | 72 |
defensive cell | 5.63e-10 | 48 |
phagocyte | 5.63e-10 | 48 |
mast cell | 2.17e-09 | 5 |
basophil mast progenitor cell | 2.17e-09 | 5 |
monopoietic cell | 7.61e-08 | 59 |
monocyte | 7.61e-08 | 59 |
monoblast | 7.61e-08 | 59 |
promonocyte | 7.61e-08 | 59 |
macrophage dendritic cell progenitor | 1.43e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 8.17e-15 | 90 |
bone element | 1.19e-13 | 82 |
skeletal system | 3.57e-13 | 100 |
bone marrow | 3.61e-12 | 76 |
immune system | 8.02e-12 | 93 |
stroma of bone marrow | 8.64e-12 | 1 |
hemolymphoid system | 5.62e-10 | 108 |
hematopoietic system | 3.71e-09 | 98 |
blood island | 3.71e-09 | 98 |
musculoskeletal system | 1.33e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.05e-12 | 1 |