FFCP PHASE1:Hg19::chr1:145727681..145727720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5174 | |EntrezGene=5174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8821 | |HGNC=8821 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUH7,Q5T2W1 | |UniProt=A8MUH7,Q5T2W1 | ||
|association_with_transcript=-3bp_to_ENST00000417171_5end | |association_with_transcript=-3bp_to_ENST00000417171_5end | ||
|cluster_id=chr1:145727681..145727720,+ | |||
|description=CAGE_peak_1_at_PDZK1_5end | |description=CAGE_peak_1_at_PDZK1_5end | ||
|id=chr1:145727681..145727720,+ | |id=chr1:145727681..145727720,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.95e-11!12;CL:0000417!8.95e-11!12;CL:0000668!8.95e-11!12;CL:0000414!8.95e-11!12;CL:0000412!8.95e-11!12;CL:0000182!8.95e-11!12;CL:0000066!2.41e-08!254;CL:0000223!6.36e-07!59 | |ontology_enrichment_celltype=CL:0000181!8.95e-11!12;CL:0000417!8.95e-11!12;CL:0000668!8.95e-11!12;CL:0000414!8.95e-11!12;CL:0000412!8.95e-11!12;CL:0000182!8.95e-11!12;CL:0000066!2.41e-08!254;CL:0000223!6.36e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.67e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.69e-19,12;CL:0000223,7.96e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.08e-21;11!UBERON:0009497;9.25e-18;13!UBERON:0003104;1.80e-15;31!UBERON:0006215;4.05e-11;3!UBERON:0001041;6.88e-07;30!CL:0000223;9.32e-07;58 | |||
|ontology_enrichment_disease=DOID:299!1.43e-07!25;DOID:305!2.46e-07!106 | |ontology_enrichment_disease=DOID:299!1.43e-07!25;DOID:305!2.46e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.37e-08;2!DOID:299;3.16e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.42e-08,2;DOID:299,3.13e-08,25;DOID:305,3.47e-07,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002423;1.20e-19;25!UBERON:0002107;1.16e-18;19!UBERON:0006925;1.16e-18;19!UBERON:0000160;9.12e-13;17!UBERON:0002368;1.33e-12;33!UBERON:0005409;3.50e-12;22!UBERON:0002365;1.99e-10;31!UBERON:0002330;1.99e-10;31!UBERON:0005172;5.22e-10;52!UBERON:0005173;5.22e-10;52!UBERON:0000949;1.20e-09;43!UBERON:0001905;5.76e-08;2!UBERON:0002757;5.76e-08;2!UBERON:0010134;5.76e-08;2!UBERON:0005408;5.76e-08;2!UBERON:0001899;5.76e-08;2!UBERON:0002108;8.70e-08;4!UBERON:0001007;1.00e-07;81!UBERON:0002417;2.06e-07;58!UBERON:0000916;2.06e-07;58!UBERON:0004921;3.85e-07;33 | |||
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| ||
|short_description=p1@PDZK1 | |short_description=p1@PDZK1 | ||
}} | }} |
Latest revision as of 18:58, 16 September 2015
Short description: | p1@PDZK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDZK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000417171_5end |
EntrezGene: | PDZK1 |
HGNC: | 8821 |
UniProt: | A8MUH7Q5T2W1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.69e-19 | 12 |
endodermal cell | 7.96e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.42e-08 | 2 |
adenocarcinoma | 3.13e-08 | 25 |
carcinoma | 3.47e-07 | 106 |