FFCP PHASE1:Hg19::chr19:19496728..19496813,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54815 | |EntrezGene=54815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29989 | |HGNC=29989 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7D9 | |UniProt=F5H7D9 | ||
|association_with_transcript=0bp_to_ENST00000494516,ENST00000537887_5end | |association_with_transcript=0bp_to_ENST00000494516,ENST00000537887_5end | ||
|cluster_id=chr19:19496728..19496813,+ | |||
|description=CAGE_peak_2_at_GATAD2A_5end | |description=CAGE_peak_2_at_GATAD2A_5end | ||
|id=chr19:19496728..19496813,+ | |id=chr19:19496728..19496813,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.88e-29!112;CL:0000049!3.88e-29!112;CL:0002032!2.37e-23!165;CL:0000837!2.37e-23!165;CL:0000037!3.11e-23!172;CL:0000566!3.11e-23!172;CL:0000988!1.18e-22!182;CL:0000766!3.09e-22!76;CL:0000557!1.43e-19!71;CL:0002009!1.41e-18!65;CL:0000839!8.26e-18!70;CL:0002194!1.02e-17!63;CL:0000576!1.02e-17!63;CL:0000040!1.02e-17!63;CL:0000559!1.02e-17!63;CL:0000738!3.92e-17!140;CL:0002057!7.30e-17!42;CL:0000860!7.99e-17!45;CL:0002031!2.38e-13!124;CL:0002087!3.96e-13!119;CL:0000063!2.56e-11!578;CL:0000012!5.75e-09!682;CL:0000548!8.14e-09!679;CL:0000004!8.14e-09!679;CL:0000255!8.14e-09!679;CL:0002371!3.58e-08!591;CL:0000144!1.08e-07!625;CL:0000115!1.14e-07!35;CL:0002078!5.69e-07!44;CL:0000066!9.82e-07!254 | |ontology_enrichment_celltype=CL:0000763!3.88e-29!112;CL:0000049!3.88e-29!112;CL:0002032!2.37e-23!165;CL:0000837!2.37e-23!165;CL:0000037!3.11e-23!172;CL:0000566!3.11e-23!172;CL:0000988!1.18e-22!182;CL:0000766!3.09e-22!76;CL:0000557!1.43e-19!71;CL:0002009!1.41e-18!65;CL:0000839!8.26e-18!70;CL:0002194!1.02e-17!63;CL:0000576!1.02e-17!63;CL:0000040!1.02e-17!63;CL:0000559!1.02e-17!63;CL:0000738!3.92e-17!140;CL:0002057!7.30e-17!42;CL:0000860!7.99e-17!45;CL:0002031!2.38e-13!124;CL:0002087!3.96e-13!119;CL:0000063!2.56e-11!578;CL:0000012!5.75e-09!682;CL:0000548!8.14e-09!679;CL:0000004!8.14e-09!679;CL:0000255!8.14e-09!679;CL:0002371!3.58e-08!591;CL:0000144!1.08e-07!625;CL:0000115!1.14e-07!35;CL:0002078!5.69e-07!44;CL:0000066!9.82e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.56e-17;33!CL:0002057;5.56e-17;33!CL:0000473;2.04e-14;39!CL:0000234;2.04e-14;39!CL:0000576;4.31e-11;48!CL:0000766;4.79e-10;69!CL:0000763;4.44e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.16e-29,108;CL:0000049,6.16e-29,108;CL:0002032,5.73e-23,161;CL:0000837,5.73e-23,161;CL:0000037,7.69e-23,168;CL:0000766,3.78e-22,72;CL:0000988,5.59e-22,177;CL:0000557,1.83e-19,67;CL:0002009,1.71e-18,61;CL:0000839,1.14e-17,66;CL:0002194,1.24e-17,59;CL:0000576,1.24e-17,59;CL:0000040,1.24e-17,59;CL:0000559,1.24e-17,59;CL:0000473,4.75e-17,48;CL:0000234,4.75e-17,48;CL:0000860,7.30e-17,42;CL:0002057,7.30e-17,42;CL:0000738,8.84e-17,136;CL:0002031,5.17e-13,120;CL:0002087,8.49e-13,115;CL:0000115,6.60e-08,36;CL:0002078,3.38e-07,45;CL:0000066,6.15e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-12;42!CL:0000049;1.26e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!2.81e-09!51;DOID:0060083!2.81e-09!51;DOID:1240!1.11e-08!39;DOID:8692!1.06e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.99e-07;31!DOID:1240;7.74e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.81e-09,51;DOID:0060083,2.81e-09,51;DOID:1240,1.11e-08,39;DOID:8692,1.06e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.73e-17!112;UBERON:0002390!4.84e-17!102;UBERON:0003061!4.84e-17!102;UBERON:0002371!2.38e-16!80;UBERON:0002405!5.59e-16!115;UBERON:0001474!5.45e-15!86;UBERON:0003081!5.13e-14!216;UBERON:0004765!2.88e-10!101;UBERON:0001434!2.88e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.73e-17,93;UBERON:0002193,3.52e-17,108;UBERON:0002390,9.39e-17,98;UBERON:0003061,9.39e-17,98;UBERON:0002371,3.98e-16,76;UBERON:0001474,9.98e-15,82;UBERON:0003081,3.75e-13,203;UBERON:0004765,9.04e-11,90;UBERON:0001434,9.78e-09,100 | |||
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| ||
|short_description=p2@GATAD2A | |short_description=p2@GATAD2A | ||
}} | }} |
Latest revision as of 19:51, 16 September 2015
Short description: | p2@GATAD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GATAD2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000494516, ENST00000537887_5end |
EntrezGene: | GATAD2A |
HGNC: | 29989 |
UniProt: | F5H7D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.16e-29 | 108 |
common myeloid progenitor | 6.16e-29 | 108 |
hematopoietic oligopotent progenitor cell | 5.73e-23 | 161 |
hematopoietic multipotent progenitor cell | 5.73e-23 | 161 |
hematopoietic stem cell | 7.69e-23 | 168 |
myeloid leukocyte | 3.78e-22 | 72 |
hematopoietic cell | 5.59e-22 | 177 |
granulocyte monocyte progenitor cell | 1.83e-19 | 67 |
macrophage dendritic cell progenitor | 1.71e-18 | 61 |
myeloid lineage restricted progenitor cell | 1.14e-17 | 66 |
monopoietic cell | 1.24e-17 | 59 |
monocyte | 1.24e-17 | 59 |
monoblast | 1.24e-17 | 59 |
promonocyte | 1.24e-17 | 59 |
defensive cell | 4.75e-17 | 48 |
phagocyte | 4.75e-17 | 48 |
classical monocyte | 7.30e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.30e-17 | 42 |
leukocyte | 8.84e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 5.17e-13 | 120 |
nongranular leukocyte | 8.49e-13 | 115 |
endothelial cell | 6.60e-08 | 36 |
meso-epithelial cell | 3.38e-07 | 45 |
epithelial cell | 6.15e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.73e-17 | 93 |
hemolymphoid system | 3.52e-17 | 108 |
hematopoietic system | 9.39e-17 | 98 |
blood island | 9.39e-17 | 98 |
bone marrow | 3.98e-16 | 76 |
bone element | 9.98e-15 | 82 |
lateral plate mesoderm | 3.75e-13 | 203 |
skeletal element | 9.04e-11 | 90 |
skeletal system | 9.78e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.81e-09 | 51 |
immune system cancer | 2.81e-09 | 51 |
leukemia | 1.11e-08 | 39 |
myeloid leukemia | 1.06e-07 | 31 |