FFCP PHASE1:Hg19::chr12:122907091..122907186,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6249 | |EntrezGene=6249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10461 | |HGNC=10461 | ||
|TSSclassifier=strong | |||
|UniProt=P30622,F5H367,F5H0P3,B3KXA5 | |UniProt=P30622,F5H367,F5H0P3,B3KXA5 | ||
|association_with_transcript=0bp_to_ENST00000358808,ENST00000361654,ENST00000537178,ENST00000539080,ENST00000542885,NM_001247997,NM_002956,NM_198240,uc001uch.1,uc001uci.1_5end | |association_with_transcript=0bp_to_ENST00000358808,ENST00000361654,ENST00000537178,ENST00000539080,ENST00000542885,NM_001247997,NM_002956,NM_198240,uc001uch.1,uc001uci.1_5end | ||
|cluster_id=chr12:122907091..122907186,- | |||
|description=CAGE_peak_1_at_CLIP1_5end | |description=CAGE_peak_1_at_CLIP1_5end | ||
|id=chr12:122907091..122907186,- | |id=chr12:122907091..122907186,- | ||
|ontology_enrichment_celltype=CL:0000860;1.29e-16;33!CL:0002057;1.29e-16;33!CL:0000473;2.79e-12;39!CL:0000234;2.79e-12;39!CL:0000576;2.50e-09;48!CL:0000766;1.10e-07;69 | |ontology_enrichment_celltype=CL:0002057!1.35e-17!42;CL:0000860!6.01e-17!45;CL:0000766!1.69e-15!76;CL:0000557!2.23e-13!71;CL:0002009!3.24e-13!65;CL:0002194!1.96e-12!63;CL:0000576!1.96e-12!63;CL:0000040!1.96e-12!63;CL:0000559!1.96e-12!63;CL:0000839!5.90e-11!70 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.29e-16;33!CL:0002057;1.29e-16;33!CL:0000473;2.79e-12;39!CL:0000234;2.79e-12;39!CL:0000576;2.50e-09;48!CL:0000766;1.10e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-17,42;CL:0002057,1.35e-17,42;CL:0000473,1.54e-15,48;CL:0000234,1.54e-15,48;CL:0000766,2.23e-15,72;CL:0000557,3.07e-13,67;CL:0002009,4.19e-13,61;CL:0002194,2.58e-12,59;CL:0000576,2.58e-12,59;CL:0000040,2.58e-12,59;CL:0000559,2.58e-12,59;CL:0000839,8.96e-11,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.19e-13!115;UBERON:0002371!1.57e-11!80;UBERON:0002390!7.09e-11!102;UBERON:0003061!7.09e-11!102;UBERON:0001474!1.29e-10!86;UBERON:0004765!2.53e-10!101;UBERON:0001434!2.53e-10!101;UBERON:0000062!3.41e-10!511;UBERON:0002193!3.55e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.83e-12,114;UBERON:0002371,2.50e-11,76;UBERON:0002390,1.25e-10,98;UBERON:0003061,1.25e-10,98;UBERON:0001474,2.17e-10,82;UBERON:0001434,1.80e-09,100;UBERON:0002193,6.44e-09,108;UBERON:0004765,9.34e-09,90;UBERON:0002405,6.04e-08,93 | |||
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5.77023286145819 | ||
|short_description=p1@CLIP1 | |short_description=p1@CLIP1 | ||
}} | }} |
Latest revision as of 00:09, 17 September 2015
Short description: | p1@CLIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358808, ENST00000361654, ENST00000537178, ENST00000539080, ENST00000542885, NM_001247997, NM_002956, NM_198240, uc001uch.1, uc001uci.1_5end |
EntrezGene: | CLIP1 |
HGNC: | 10461 |
UniProt: | P30622F5H367F5H0P3B3KXA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-17 | 42 |
defensive cell | 1.54e-15 | 48 |
phagocyte | 1.54e-15 | 48 |
myeloid leukocyte | 2.23e-15 | 72 |
granulocyte monocyte progenitor cell | 3.07e-13 | 67 |
macrophage dendritic cell progenitor | 4.19e-13 | 61 |
monopoietic cell | 2.58e-12 | 59 |
monocyte | 2.58e-12 | 59 |
monoblast | 2.58e-12 | 59 |
promonocyte | 2.58e-12 | 59 |
myeloid lineage restricted progenitor cell | 8.96e-11 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.83e-12 | 114 |
bone marrow | 2.50e-11 | 76 |
hematopoietic system | 1.25e-10 | 98 |
blood island | 1.25e-10 | 98 |
bone element | 2.17e-10 | 82 |
skeletal system | 1.80e-09 | 100 |
hemolymphoid system | 6.44e-09 | 108 |
skeletal element | 9.34e-09 | 90 |
immune system | 6.04e-08 | 93 |