FFCP PHASE1:Hg19::chr11:17741111..17741124,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4654 | |EntrezGene=4654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7611 | |HGNC=7611 | ||
|TSSclassifier=strong | |||
|UniProt=P15172 | |UniProt=P15172 | ||
|association_with_transcript=0bp_to_ENST00000250003_5end | |association_with_transcript=0bp_to_ENST00000250003_5end | ||
|cluster_id=chr11:17741111..17741124,+ | |||
|coexpression_cluster_id=C559 | |||
|description=CAGE_peak_1_at_MYOD1_5end | |description=CAGE_peak_1_at_MYOD1_5end | ||
|id=chr11:17741111..17741124,+ | |id=chr11:17741111..17741124,+ | ||
|ontology_enrichment_celltype=CL:0000188!3.93e-31!9;CL:0000515!5.43e-15!4;CL:0000680!5.36e-12!57;CL:0000056!5.36e-12!57;CL:0000355!5.36e-12!57;CL:0000594!2.78e-11!3;CL:0002603!6.09e-11!3;CL:0002586!9.12e-11!3;CL:0000183!9.06e-10!59;CL:0000149!3.55e-08!4;CL:0000187!4.93e-08!54;CL:0002575!5.79e-08!2;CL:0000393!5.97e-07!60;CL:0000211!5.97e-07!60 | |ontology_enrichment_celltype=CL:0000188!3.93e-31!9;CL:0000515!5.43e-15!4;CL:0000680!5.36e-12!57;CL:0000056!5.36e-12!57;CL:0000355!5.36e-12!57;CL:0000594!2.78e-11!3;CL:0002603!6.09e-11!3;CL:0002586!9.12e-11!3;CL:0000183!9.06e-10!59;CL:0000149!3.55e-08!4;CL:0000187!4.93e-08!54;CL:0002575!5.79e-08!2;CL:0000393!5.97e-07!60;CL:0000211!5.97e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000188;3.39e-47;9!CL:0000680;1.65e-34;7!CL:0000056;1.32e-27;4!CL:0000515;1.53e-21;3!CL:0000594;5.61e-10;3!CL:0002603;9.81e-10;3!CL:0002586;1.34e-09;3!CL:0000228;8.12e-08;1!CL:0002372;8.12e-08;1!CL:0002321;1.79e-07;15!CL:0000149;2.07e-07;4!CL:0000187;8.78e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.29e-47,9;CL:0000515,1.28e-27,4;CL:0000680,1.29e-14,58;CL:0000056,1.29e-14,58;CL:0000355,1.29e-14,58;CL:0000594,5.49e-10,3;CL:0002603,1.07e-09,3;CL:0002586,1.34e-09,3;CL:0000187,1.61e-08,55;CL:0000228,8.12e-08,1;CL:0002372,8.12e-08,1;CL:0000393,1.52e-07,61;CL:0000211,1.52e-07,61;CL:0000149,2.07e-07,4;CL:0000222,5.86e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000515;1.32e-27;4!CL:0000355;7.37e-10;58!UBERON:0004874;6.41e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.96e-18!61;UBERON:0002036!3.96e-18!61;UBERON:0003082!3.96e-18!61;UBERON:0002385!2.19e-17!63;UBERON:0001015!2.19e-17!63;UBERON:0000383!2.19e-17!63;UBERON:0004290!3.95e-15!70;UBERON:0000486!3.58e-12!82;UBERON:0000914!5.77e-12!83;UBERON:0002329!5.77e-12!83;UBERON:0003077!5.77e-12!83;UBERON:0003059!5.77e-12!83;UBERON:0007282!5.77e-12!83;UBERON:0009618!5.77e-12!83;UBERON:0007285!5.77e-12!83;UBERON:0001781!9.12e-11!3;UBERON:0001782!9.12e-11!3;UBERON:0005424!9.12e-11!3;UBERON:0000490!2.02e-09!138;UBERON:0001630!5.79e-08!2;UBERON:0005090!5.79e-08!2;UBERON:0000341!7.11e-08!2;UBERON:0000481!7.73e-08!347;UBERON:0005256!2.95e-07!143;UBERON:0003104!7.08e-07!238;UBERON:0009142!7.08e-07!238 | |ontology_enrichment_uberon=UBERON:0001134!3.96e-18!61;UBERON:0002036!3.96e-18!61;UBERON:0003082!3.96e-18!61;UBERON:0002385!2.19e-17!63;UBERON:0001015!2.19e-17!63;UBERON:0000383!2.19e-17!63;UBERON:0004290!3.95e-15!70;UBERON:0000486!3.58e-12!82;UBERON:0000914!5.77e-12!83;UBERON:0002329!5.77e-12!83;UBERON:0003077!5.77e-12!83;UBERON:0003059!5.77e-12!83;UBERON:0007282!5.77e-12!83;UBERON:0009618!5.77e-12!83;UBERON:0007285!5.77e-12!83;UBERON:0001781!9.12e-11!3;UBERON:0001782!9.12e-11!3;UBERON:0005424!9.12e-11!3;UBERON:0000490!2.02e-09!138;UBERON:0001630!5.79e-08!2;UBERON:0005090!5.79e-08!2;UBERON:0000341!7.11e-08!2;UBERON:0000481!7.73e-08!347;UBERON:0005256!2.95e-07!143;UBERON:0003104!7.08e-07!238;UBERON:0009142!7.08e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.29e-92;16!UBERON:0002036;3.29e-92;16!UBERON:0002385;2.67e-45;31!UBERON:0001015;2.67e-45;31!UBERON:0000383;2.67e-45;31!UBERON:0005090;4.94e-14;2!UBERON:0001630;4.94e-14;2!UBERON:0001781;1.34e-09;3!UBERON:0001782;1.34e-09;3!UBERON:0002204;1.65e-09;70!UBERON:0002426;5.05e-08;1!UBERON:0003831;5.05e-08;1!UBERON:0003898;5.05e-08;1!UBERON:0004830;5.05e-08;1!UBERON:0003830;5.05e-08;1!UBERON:0005175;5.05e-08;1!UBERON:0001774;5.05e-08;1!UBERON:0001103;5.05e-08;1!UBERON:0000989;6.41e-08;1!UBERON:0008811;6.41e-08;1!UBERON:0007029;1.06e-07;1!UBERON:0001389;1.06e-07;1!UBERON:0000026;1.06e-07;1!UBERON:0008784;1.06e-07;1!UBERON:0006058;1.06e-07;1!UBERON:0003663;1.06e-07;1!UBERON:0004256;1.06e-07;1!UBERON:0004708;1.06e-07;1!UBERON:0002101;1.06e-07;1!UBERON:0004709;1.06e-07;1!UBERON:0002529;1.06e-07;1!UBERON:0010538;1.06e-07;1!UBERON:0003661;1.06e-07;1!UBERON:0010890;1.06e-07;1!UBERON:0002471;1.06e-07;1!UBERON:0001383;1.06e-07;1!UBERON:0010758;1.06e-07;1!UBERON:0010707;1.06e-07;1!UBERON:0000978;1.06e-07;1!UBERON:0002103;1.06e-07;1!UBERON:0001665;1.06e-07;1!UBERON:0003823;1.06e-07;1!UBERON:0000154;1.06e-07;1!UBERON:0010709;1.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.13e-24,62;UBERON:0002036,1.13e-24,62;UBERON:0003082,1.13e-24,62;UBERON:0002385,8.40e-24,64;UBERON:0001015,8.40e-24,64;UBERON:0000383,8.40e-24,64;UBERON:0002329,3.84e-21,71;UBERON:0003059,3.84e-21,71;UBERON:0007282,3.84e-21,71;UBERON:0004290,3.84e-21,71;UBERON:0009618,3.84e-21,71;UBERON:0003077,8.37e-21,72;UBERON:0007285,8.37e-21,72;UBERON:0007524,1.78e-20,73;UBERON:0007503,5.86e-19,78;UBERON:0000486,1.26e-17,83;UBERON:0005256,4.29e-16,122;UBERON:0005090,5.65e-14,2;UBERON:0001630,5.65e-14,2;UBERON:0003104,2.25e-11,160;UBERON:0009142,2.25e-11,160;UBERON:0000490,4.00e-11,148;UBERON:0001782,1.34e-09,3;UBERON:0005424,1.34e-09,3;UBERON:0002100,1.62e-09,199;UBERON:0002426,5.05e-08,1;UBERON:0003831,5.05e-08,1;UBERON:0003898,5.05e-08,1;UBERON:0004830,5.05e-08,1;UBERON:0003830,5.05e-08,1;UBERON:0005175,5.05e-08,1;UBERON:0001774,5.05e-08,1;UBERON:0001103,5.05e-08,1;UBERON:0010084,5.05e-08,1;UBERON:0000989,5.79e-08,1;UBERON:0008811,5.79e-08,1;UBERON:0006258,5.79e-08,1;UBERON:0005876,5.79e-08,1;UBERON:0004874,5.79e-08,1;UBERON:0007029,9.29e-08,1;UBERON:0005418,1.21e-07,1;UBERON:0001389,1.21e-07,1;UBERON:0000026,1.21e-07,1;UBERON:0008784,1.21e-07,1;UBERON:0006058,1.21e-07,1;UBERON:0003663,1.21e-07,1;UBERON:0004256,1.21e-07,1;UBERON:0004708,1.21e-07,1;UBERON:0002101,1.21e-07,1;UBERON:0004709,1.21e-07,1;UBERON:0002529,1.21e-07,1;UBERON:0010538,1.21e-07,1;UBERON:0003661,1.21e-07,1;UBERON:0010890,1.21e-07,1;UBERON:0002471,1.21e-07,1;UBERON:0001383,1.21e-07,1;UBERON:0004357,1.21e-07,1;UBERON:0004347,1.21e-07,1;UBERON:0005420,1.21e-07,1;UBERON:0005732,1.21e-07,1;UBERON:0010758,1.21e-07,1;UBERON:0010707,1.21e-07,1;UBERON:0000978,1.21e-07,1;UBERON:0002103,1.21e-07,1;UBERON:0001665,1.21e-07,1;UBERON:0003823,1.21e-07,1;UBERON:0000154,1.21e-07,1;UBERON:0010709,1.21e-07,1;UBERON:0005733,1.21e-07,1;UBERON:0005730,1.21e-07,1;UBERON:0001781,2.07e-07,4;UBERON:0002204,4.07e-07,167;UBERON:0000483,4.43e-07,306;UBERON:0000119,5.73e-07,309 | |||
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|short_description=p1@MYOD1 | |short_description=p1@MYOD1 | ||
}} | }} |
Latest revision as of 00:40, 17 September 2015
Short description: | p1@MYOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYOD1_5end |
Coexpression cluster: | C559_Skeletal_Pericytes_mesenchymal_Myoblast_rhabdomyosarcoma_skeletal_tongue |
Association with transcript: | 0bp_to_ENST00000250003_5end |
EntrezGene: | MYOD1 |
HGNC: | 7611 |
UniProt: | P15172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.29e-47 | 9 |
skeletal muscle myoblast | 1.28e-27 | 4 |
muscle precursor cell | 1.29e-14 | 58 |
myoblast | 1.29e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.29e-14 | 58 |
skeletal muscle satellite cell | 5.49e-10 | 3 |
astrocyte of the cerebellum | 1.07e-09 | 3 |
retinal pigment epithelial cell | 1.34e-09 | 3 |
muscle cell | 1.61e-08 | 55 |
multinucleate cell | 8.12e-08 | 1 |
myotube | 8.12e-08 | 1 |
electrically responsive cell | 1.52e-07 | 61 |
electrically active cell | 1.52e-07 | 61 |
visual pigment cell | 2.07e-07 | 4 |
mesodermal cell | 5.86e-07 | 121 |