FFCP PHASE1:Hg19::chr19:2476116..2476132,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4616 | |EntrezGene=4616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4096 | |HGNC=4096 | ||
|TSSclassifier=strong | |||
|UniProt=O75293 | |UniProt=O75293 | ||
|association_with_transcript=0bp_to_ENST00000215631,NM_015675_5end | |association_with_transcript=0bp_to_ENST00000215631,NM_015675_5end | ||
|cluster_id=chr19:2476116..2476132,+ | |||
|coexpression_cluster_id=C597 | |||
|description=CAGE_peak_1_at_GADD45B_5end | |description=CAGE_peak_1_at_GADD45B_5end | ||
|id=chr19:2476116..2476132,+ | |id=chr19:2476116..2476132,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.48e-21!42;CL:0000738!5.42e-21!140;CL:0000860!3.29e-18!45;CL:0000766!2.73e-17!76;CL:0002087!4.66e-14!119;CL:0000557!7.48e-14!71;CL:0002031!7.97e-14!124;CL:0002009!3.76e-13!65;CL:0002320!1.76e-12!365;CL:0002194!3.27e-12!63;CL:0000576!3.27e-12!63;CL:0000040!3.27e-12!63;CL:0000559!3.27e-12!63;CL:0000134!4.28e-12!358;CL:0000839!5.31e-12!70;CL:0000988!6.84e-11!182;CL:0000037!4.57e-10!172;CL:0000566!4.57e-10!172;CL:0002032!7.72e-09!165;CL:0000837!7.72e-09!165;CL:0000219!3.26e-08!390 | |ontology_enrichment_celltype=CL:0002057!4.48e-21!42;CL:0000738!5.42e-21!140;CL:0000860!3.29e-18!45;CL:0000766!2.73e-17!76;CL:0002087!4.66e-14!119;CL:0000557!7.48e-14!71;CL:0002031!7.97e-14!124;CL:0002009!3.76e-13!65;CL:0002320!1.76e-12!365;CL:0002194!3.27e-12!63;CL:0000576!3.27e-12!63;CL:0000040!3.27e-12!63;CL:0000559!3.27e-12!63;CL:0000134!4.28e-12!358;CL:0000839!5.31e-12!70;CL:0000988!6.84e-11!182;CL:0000037!4.57e-10!172;CL:0000566!4.57e-10!172;CL:0002032!7.72e-09!165;CL:0000837!7.72e-09!165;CL:0000219!3.26e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.21e-16;33!CL:0002057;6.21e-16;33!CL:0000576;8.12e-12;48!CL:0000473;1.74e-11;39!CL:0000234;1.74e-11;39!CL:0000766;2.59e-10;69!CL:0002087;8.64e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.64e-22,136;CL:0000860,4.48e-21,42;CL:0002057,4.48e-21,42;CL:0000766,4.34e-19,72;CL:0000473,1.20e-18,48;CL:0000234,1.20e-18,48;CL:0000557,1.90e-15,67;CL:0002087,3.69e-15,115;CL:0002031,6.99e-15,120;CL:0002009,8.62e-15,61;CL:0002194,8.53e-14,59;CL:0000576,8.53e-14,59;CL:0000040,8.53e-14,59;CL:0000559,8.53e-14,59;CL:0000839,1.92e-13,66;CL:0002320,3.69e-13,361;CL:0000134,9.11e-13,354;CL:0000988,1.11e-11,177;CL:0000037,9.63e-11,168;CL:0002032,1.79e-09,161;CL:0000837,1.79e-09,161;CL:0000219,9.93e-09,386;CL:0000763,2.76e-07,108;CL:0000049,2.76e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.41e-15!112;UBERON:0002405!1.61e-14!115;UBERON:0002390!2.28e-14!102;UBERON:0003061!2.28e-14!102;UBERON:0002371!2.21e-12!80;UBERON:0001474!4.29e-12!86;UBERON:0002384!1.35e-11!375;UBERON:0004765!1.92e-08!101;UBERON:0001434!1.92e-08!101 | |ontology_enrichment_uberon=UBERON:0002193!1.41e-15!112;UBERON:0002405!1.61e-14!115;UBERON:0002390!2.28e-14!102;UBERON:0003061!2.28e-14!102;UBERON:0002371!2.21e-12!80;UBERON:0001474!4.29e-12!86;UBERON:0002384!1.35e-11!375;UBERON:0004765!1.92e-08!101;UBERON:0001434!1.92e-08!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.14e-17,108;UBERON:0002390,1.28e-15,98;UBERON:0003061,1.28e-15,98;UBERON:0002405,2.02e-15,93;UBERON:0002371,1.02e-13,76;UBERON:0001474,2.46e-13,82;UBERON:0002384,3.08e-12,371;UBERON:0004765,4.12e-12,90;UBERON:0001434,2.57e-09,100;UBERON:0003081,1.78e-07,203 | |||
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| ||
|short_description=p1@GADD45B | |short_description=p1@GADD45B | ||
}} | }} |
Latest revision as of 01:24, 17 September 2015
Short description: | p1@GADD45B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GADD45B_5end |
Coexpression cluster: | C597_CD14_mature_immature_Eosinophils_Mast_embryonic_chorionic |
Association with transcript: | 0bp_to_ENST00000215631, NM_015675_5end |
EntrezGene: | GADD45B |
HGNC: | 4096 |
UniProt: | O75293 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.64e-22 | 136 |
classical monocyte | 4.48e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.48e-21 | 42 |
myeloid leukocyte | 4.34e-19 | 72 |
defensive cell | 1.20e-18 | 48 |
phagocyte | 1.20e-18 | 48 |
granulocyte monocyte progenitor cell | 1.90e-15 | 67 |
nongranular leukocyte | 3.69e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 6.99e-15 | 120 |
macrophage dendritic cell progenitor | 8.62e-15 | 61 |
monopoietic cell | 8.53e-14 | 59 |
monocyte | 8.53e-14 | 59 |
monoblast | 8.53e-14 | 59 |
promonocyte | 8.53e-14 | 59 |
myeloid lineage restricted progenitor cell | 1.92e-13 | 66 |
connective tissue cell | 3.69e-13 | 361 |
mesenchymal cell | 9.11e-13 | 354 |
hematopoietic cell | 1.11e-11 | 177 |
hematopoietic stem cell | 9.63e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.79e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-09 | 161 |
motile cell | 9.93e-09 | 386 |
myeloid cell | 2.76e-07 | 108 |
common myeloid progenitor | 2.76e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.14e-17 | 108 |
hematopoietic system | 1.28e-15 | 98 |
blood island | 1.28e-15 | 98 |
immune system | 2.02e-15 | 93 |
bone marrow | 1.02e-13 | 76 |
bone element | 2.46e-13 | 82 |
connective tissue | 3.08e-12 | 371 |
skeletal element | 4.12e-12 | 90 |
skeletal system | 2.57e-09 | 100 |
lateral plate mesoderm | 1.78e-07 | 203 |