FFCP PHASE1:Hg19::chr4:185772235..185772249,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:185772235..185772249,- to FFCP PHASE1:Hg19::chr4:185772235..185772249,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100500818 | |EntrezGene=100500818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=38954 | |HGNC=38954 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_NR_037510_5end | |||
|cluster_id=chr4:185772235..185772249,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_2_at_MIR3945_5end | |||
|id=chr4:185772235..185772249,- | |||
|ontology_enrichment_celltype=CL:0002057!4.96e-47!42;CL:0000860!1.10e-42!45;CL:0002087!1.48e-41!119;CL:0000037!2.59e-41!172;CL:0000566!2.59e-41!172;CL:0000988!7.84e-41!182;CL:0002032!8.06e-39!165;CL:0000837!8.06e-39!165;CL:0000738!1.66e-37!140;CL:0002031!2.96e-33!124;CL:0002194!6.73e-32!63;CL:0000576!6.73e-32!63;CL:0000040!6.73e-32!63;CL:0000559!6.73e-32!63;CL:0000766!8.89e-31!76;CL:0002009!2.29e-30!65;CL:0000763!3.83e-29!112;CL:0000049!3.83e-29!112;CL:0000557!8.93e-28!71;CL:0000839!6.22e-27!70;CL:0000134!2.89e-13!358;CL:0002320!2.18e-12!365;CL:0000219!6.48e-12!390;CL:0002393!2.70e-11!9;CL:0002397!2.70e-11!9;CL:0000034!4.71e-10!444;CL:0000048!1.13e-09!430;CL:0000723!2.05e-09!436;CL:0000542!6.60e-09!53;CL:0000051!6.60e-09!53;CL:0000838!1.61e-08!52;CL:0000080!5.30e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.09e-66;33!CL:0002057;7.09e-66;33!CL:0000576;9.07e-51;48!CL:0000473;2.12e-45;39!CL:0000234;2.12e-45;39!CL:0000766;3.83e-31;69!CL:0002087;1.69e-21;104!CL:0002393;1.43e-17;6!CL:0002397;1.43e-17;6!CL:0000763;4.58e-14;100!CL:0000738;1.62e-13;136!CL:0000988;1.04e-11;177!CL:0000767;1.03e-09;3!CL:0000226;1.20e-09;3!CL:0000842;1.20e-09;3!CL:0000875;7.72e-08;3!CL:0002396;7.72e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.82e-96,42;CL:0002057,1.82e-96,42;CL:0000473,5.83e-83,48;CL:0000234,5.83e-83,48;CL:0002194,2.30e-67,59;CL:0000576,2.30e-67,59;CL:0000040,2.30e-67,59;CL:0000559,2.30e-67,59;CL:0002009,8.19e-65,61;CL:0000766,6.44e-63,72;CL:0000557,4.71e-61,67;CL:0002087,3.24e-60,115;CL:0000839,4.19e-59,66;CL:0000738,1.04e-55,136;CL:0000988,6.34e-52,177;CL:0002031,8.83e-50,120;CL:0000037,1.08e-49,168;CL:0002032,3.42e-44,161;CL:0000837,3.42e-44,161;CL:0000763,4.47e-44,108;CL:0000049,4.47e-44,108;CL:0002393,1.39e-23,9;CL:0002397,1.39e-23,9;CL:0000134,1.17e-15,354;CL:0002320,4.60e-15,361;CL:0000219,1.53e-14,386;CL:0000034,1.31e-11,441;CL:0000048,1.94e-10,427;CL:0000723,4.33e-10,433;CL:0000767,1.02e-09,3;CL:0000226,1.24e-09,3;CL:0000842,1.24e-09,3;CL:0000875,8.76e-08,3;CL:0002396,8.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-67;42!CL:0000049;1.66e-13;108 | |||
|ontology_enrichment_disease=DOID:2531!1.23e-09!51;DOID:0060083!1.23e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.84e-31!102;UBERON:0003061!3.84e-31!102;UBERON:0002193!2.14e-27!112;UBERON:0002371!2.21e-26!80;UBERON:0001474!3.02e-23!86;UBERON:0004765!8.30e-19!101;UBERON:0001434!8.30e-19!101;UBERON:0002405!1.62e-17!115;UBERON:0002384!1.48e-12!375;UBERON:0002204!2.70e-09!167;UBERON:0003081!4.93e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.98e-08;15!UBERON:0000179;5.98e-08;15!UBERON:0000463;5.98e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.41e-57,98;UBERON:0003061,1.41e-57,98;UBERON:0002371,1.31e-55,76;UBERON:0002193,4.65e-51,108;UBERON:0001474,1.02e-50,82;UBERON:0004765,3.36e-45,90;UBERON:0002405,2.25e-43,93;UBERON:0001434,1.54e-39,100;UBERON:0003081,4.02e-21,203;UBERON:0002204,4.05e-19,167;UBERON:0002384,4.91e-15,371;UBERON:0000926,7.24e-10,315;UBERON:0004120,7.24e-10,315;UBERON:0006603,7.24e-10,315;UBERON:0000178,5.53e-08,15;UBERON:0000179,5.53e-08,15;UBERON:0000463,5.53e-08,15 | |||
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| ||
|short_description=p2@MIR3945 | |||
}} | }} |
Latest revision as of 02:21, 17 September 2015
Short description: | p2@MIR3945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR3945_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 14bp_to_NR_037510_5end |
EntrezGene: | MIR3945 |
HGNC: | 38954 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-57 | 98 |
blood island | 1.41e-57 | 98 |
bone marrow | 1.31e-55 | 76 |
hemolymphoid system | 4.65e-51 | 108 |
bone element | 1.02e-50 | 82 |
skeletal element | 3.36e-45 | 90 |
immune system | 2.25e-43 | 93 |
skeletal system | 1.54e-39 | 100 |
lateral plate mesoderm | 4.02e-21 | 203 |
musculoskeletal system | 4.05e-19 | 167 |
connective tissue | 4.91e-15 | 371 |
mesoderm | 7.24e-10 | 315 |
mesoderm-derived structure | 7.24e-10 | 315 |
presumptive mesoderm | 7.24e-10 | 315 |
blood | 5.53e-08 | 15 |
haemolymphatic fluid | 5.53e-08 | 15 |
organism substance | 5.53e-08 | 15 |