FFCP PHASE1:Hg19::chr17:6915808..6915823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440400,124944 | |EntrezGene=440400,124944 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33911,28737 | |HGNC=33911,28737 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P5S7 | |UniProt=Q6P5S7 | ||
|association_with_transcript=10bp_to_ENST00000402093,uc002gea.2,uc002geb.3_5end | |association_with_transcript=10bp_to_ENST00000402093,uc002gea.2,uc002geb.3_5end | ||
|cluster_id=chr17:6915808..6915823,+ | |||
|coexpression_cluster_id=C3670 | |||
|description=CAGE_peak_5_at_RNASEK_5end,CAGE_peak_8_at_C17orf49_5end | |description=CAGE_peak_5_at_RNASEK_5end,CAGE_peak_8_at_C17orf49_5end | ||
|id=chr17:6915808..6915823,+ | |id=chr17:6915808..6915823,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.70e-33!76;CL:0002009!4.30e-32!65;CL:0002194!4.29e-31!63;CL:0000576!4.29e-31!63;CL:0000040!4.29e-31!63;CL:0000559!4.29e-31!63;CL:0000557!1.10e-28!71;CL:0002057!1.47e-27!42;CL:0000860!6.47e-27!45;CL:0000839!1.25e-26!70;CL:0000763!4.98e-21!112;CL:0000049!4.98e-21!112;CL:0000738!6.64e-10!140;CL:0002087!5.80e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.70e-33!76;CL:0002009!4.30e-32!65;CL:0002194!4.29e-31!63;CL:0000576!4.29e-31!63;CL:0000040!4.29e-31!63;CL:0000559!4.29e-31!63;CL:0000557!1.10e-28!71;CL:0002057!1.47e-27!42;CL:0000860!6.47e-27!45;CL:0000839!1.25e-26!70;CL:0000763!4.98e-21!112;CL:0000049!4.98e-21!112;CL:0000738!6.64e-10!140;CL:0002087!5.80e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.95e-32;33!CL:0002057;2.95e-32;33!CL:0000473;2.97e-31;39!CL:0000234;2.97e-31;39!CL:0000576;1.03e-26;48!CL:0000766;1.01e-20;69!CL:0000763;2.24e-09;100!CL:0000094;1.24e-08;8!CL:0000990;2.93e-07;8!CL:0000738;4.29e-07;136!CL:0000081;7.93e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.37e-49,72;CL:0000473,2.24e-48,48;CL:0000234,2.24e-48,48;CL:0002009,1.03e-47,61;CL:0002194,3.96e-46,59;CL:0000576,3.96e-46,59;CL:0000040,3.96e-46,59;CL:0000559,3.96e-46,59;CL:0000860,4.38e-43,42;CL:0002057,4.38e-43,42;CL:0000557,1.06e-42,67;CL:0000839,3.73e-40,66;CL:0000763,6.00e-34,108;CL:0000049,6.00e-34,108;CL:0000738,9.06e-23,136;CL:0002087,7.72e-17,115;CL:0002031,1.30e-15,120;CL:0002032,1.37e-15,161;CL:0000837,1.37e-15,161;CL:0000037,1.38e-15,168;CL:0000988,4.11e-14,177;CL:0002393,3.92e-09,9;CL:0002397,3.92e-09,9;CL:0000094,1.46e-08,8;CL:0000990,2.72e-07,8;CL:0000081,7.65e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-31;42!CL:0000049;9.20e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.50e-28!112;UBERON:0002390!2.95e-25!102;UBERON:0003061!2.95e-25!102;UBERON:0002405!9.79e-25!115;UBERON:0002371!1.52e-24!80;UBERON:0001474!1.10e-20!86;UBERON:0003081!2.15e-17!216;UBERON:0004765!3.65e-17!101;UBERON:0001434!3.65e-17!101;UBERON:0000926!1.10e-15!448;UBERON:0004120!1.10e-15!448;UBERON:0006603!1.10e-15!448;UBERON:0002204!2.22e-14!167;UBERON:0000467!5.37e-08!625;UBERON:0000480!6.35e-08!626;UBERON:0000923!5.05e-07!604;UBERON:0005291!5.05e-07!604;UBERON:0006598!5.05e-07!604;UBERON:0002532!5.05e-07!604;UBERON:0002050!7.83e-07!605;UBERON:0005423!7.83e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.00e-37,93;UBERON:0002371,5.82e-36,76;UBERON:0002193,3.69e-35,108;UBERON:0002390,1.03e-32,98;UBERON:0003061,1.03e-32,98;UBERON:0001474,1.32e-31,82;UBERON:0004765,4.09e-29,90;UBERON:0001434,6.96e-24,100;UBERON:0003081,1.37e-22,203;UBERON:0002204,4.71e-17,167;UBERON:0000926,9.27e-13,315;UBERON:0004120,9.27e-13,315;UBERON:0006603,9.27e-13,315 | |||
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| ||
|short_description=p5@RNASEK,p8@C17orf49 | |short_description=p5@RNASEK,p8@C17orf49 | ||
}} | }} |
Latest revision as of 02:45, 17 September 2015
Short description: | p5@RNASEK, p8@C17orf49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNASEK_5end, CAGE_peak_8_at_C17orf49_5end |
Coexpression cluster: | C3670_CD14_Mesenchymal_Eosinophils_CD14CD16_Monocytederived_Neutrophils_Macrophage |
Association with transcript: | 10bp_to_ENST00000402093, uc002gea.2, uc002geb.3_5end |
EntrezGene: | 440400,124944 |
HGNC: | 28737&submit=Submit 33911, 28737 |
UniProt: | Q6P5S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.37e-49 | 72 |
defensive cell | 2.24e-48 | 48 |
phagocyte | 2.24e-48 | 48 |
macrophage dendritic cell progenitor | 1.03e-47 | 61 |
monopoietic cell | 3.96e-46 | 59 |
monocyte | 3.96e-46 | 59 |
monoblast | 3.96e-46 | 59 |
promonocyte | 3.96e-46 | 59 |
classical monocyte | 4.38e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.38e-43 | 42 |
granulocyte monocyte progenitor cell | 1.06e-42 | 67 |
myeloid lineage restricted progenitor cell | 3.73e-40 | 66 |
myeloid cell | 6.00e-34 | 108 |
common myeloid progenitor | 6.00e-34 | 108 |
leukocyte | 9.06e-23 | 136 |
nongranular leukocyte | 7.72e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.30e-15 | 120 |
hematopoietic oligopotent progenitor cell | 1.37e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-15 | 161 |
hematopoietic stem cell | 1.38e-15 | 168 |
hematopoietic cell | 4.11e-14 | 177 |
intermediate monocyte | 3.92e-09 | 9 |
CD14-positive, CD16-positive monocyte | 3.92e-09 | 9 |
granulocyte | 1.46e-08 | 8 |
conventional dendritic cell | 2.72e-07 | 8 |
blood cell | 7.65e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
immune system | 8.00e-37 | 93 |
bone marrow | 5.82e-36 | 76 |
hemolymphoid system | 3.69e-35 | 108 |
hematopoietic system | 1.03e-32 | 98 |
blood island | 1.03e-32 | 98 |
bone element | 1.32e-31 | 82 |
skeletal element | 4.09e-29 | 90 |
skeletal system | 6.96e-24 | 100 |
lateral plate mesoderm | 1.37e-22 | 203 |
musculoskeletal system | 4.71e-17 | 167 |
mesoderm | 9.27e-13 | 315 |
mesoderm-derived structure | 9.27e-13 | 315 |
presumptive mesoderm | 9.27e-13 | 315 |