FFCP PHASE1:Hg19::chr10:13141974..13141997,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83643 | |EntrezGene=83643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23813 | |HGNC=23813 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-261bp_to_uc001ilr.2,uc009xjc.1,uc009xjd.1_5end | |association_with_transcript=-261bp_to_uc001ilr.2,uc009xjc.1,uc009xjd.1_5end | ||
|cluster_id=chr10:13141974..13141997,- | |||
|coexpression_cluster_id=C279 | |||
|description=CAGE_peak_3_at_CCDC3_5end | |description=CAGE_peak_3_at_CCDC3_5end | ||
|id=chr10:13141974..13141997,- | |id=chr10:13141974..13141997,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.09e-19;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.74e-29!57;UBERON:0005068!1.74e-29!57;UBERON:0006241!1.74e-29!57;UBERON:0007135!1.74e-29!57;UBERON:0001017!4.47e-27!82;UBERON:0002616!9.35e-27!59;UBERON:0005743!1.59e-25!86;UBERON:0000955!4.40e-25!69;UBERON:0006238!4.40e-25!69;UBERON:0000073!3.52e-24!94;UBERON:0001016!3.52e-24!94;UBERON:0002780!4.93e-23!41;UBERON:0001890!4.93e-23!41;UBERON:0006240!4.93e-23!41;UBERON:0003080!4.40e-22!42;UBERON:0003075!2.13e-21!86;UBERON:0007284!2.13e-21!86;UBERON:0002346!8.03e-21!90;UBERON:0002020!8.91e-20!34;UBERON:0003528!8.91e-20!34;UBERON:0001893!1.86e-19!34;UBERON:0002791!4.72e-19!33;UBERON:0001869!6.93e-18!32;UBERON:0003056!1.05e-15!61;UBERON:0007023!2.18e-13!115;UBERON:0000956!2.93e-13!25;UBERON:0000203!2.93e-13!25;UBERON:0000033!4.79e-12!123;UBERON:0000153!7.28e-12!129;UBERON:0007811!7.28e-12!129;UBERON:0004121!1.03e-11!169;UBERON:0000924!1.21e-11!173;UBERON:0006601!1.21e-11!173;UBERON:0002619!1.99e-11!22;UBERON:0001950!6.07e-10!20;UBERON:0003076!1.64e-08!15;UBERON:0003057!1.64e-08!15;UBERON:0002420!2.18e-08!9;UBERON:0007245!2.18e-08!9;UBERON:0010009!2.18e-08!9;UBERON:0010011!2.18e-08!9;UBERON:0000454!2.18e-08!9;UBERON:0002308!3.18e-08!9;UBERON:0000125!3.18e-08!9;UBERON:0004733!4.67e-08!12;UBERON:0002028!4.67e-08!12;UBERON:0007277!4.67e-08!12;UBERON:0004732!4.14e-07!13;UBERON:0009663!9.27e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.70e-30;53!UBERON:0002616;5.70e-30;53!UBERON:0002780;3.66e-24;41!UBERON:0001890;3.66e-24;41!UBERON:0002791;1.91e-20;32!UBERON:0002619;5.38e-20;22!UBERON:0000956;1.63e-17;25!UBERON:0000203;1.63e-17;25!UBERON:0003528;1.65e-17;34!UBERON:0002020;1.65e-17;34!UBERON:0004733;2.05e-17;12!UBERON:0002028;2.05e-17;12!UBERON:0001869;2.11e-17;32!UBERON:0001950;2.18e-17;20!UBERON:0000955;3.23e-17;68!UBERON:0001893;4.61e-17;34!UBERON:0004732;4.92e-16;13!UBERON:0001017;1.52e-14;75!UBERON:0001016;7.42e-14;83!UBERON:0002680;5.87e-11;9!UBERON:0001895;5.87e-11;9!UBERON:0002420;1.48e-10;9!UBERON:0007245;1.48e-10;9!UBERON:0010009;1.48e-10;9!UBERON:0010011;1.48e-10;9!UBERON:0000454;1.48e-10;9!UBERON:0002037;9.18e-10;6!UBERON:0002298;2.63e-09;6!UBERON:0001896;1.01e-08;3!UBERON:0005290;1.01e-08;3!UBERON:0001871;3.29e-08;6!UBERON:0001894;3.29e-08;7!UBERON:0009663;4.83e-08;7!UBERON:0006834;3.72e-07;1!UBERON:0002038;3.72e-07;1!UBERON:0003112;3.72e-07;1!UBERON:0000996;3.72e-07;1!UBERON:0011158;3.72e-07;1!UBERON:0009661;3.72e-07;1!UBERON:0002950;3.72e-07;1!UBERON:0003128;3.72e-07;1!UBERON:0001891;3.72e-07;1!UBERON:0001703;3.72e-07;1!UBERON:0002241;3.72e-07;1!UBERON:0002784;6.11e-07;4!UBERON:0003296;9.63e-07;4!UBERON:0010133;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.80e-44,53;UBERON:0002616,1.80e-44,53;UBERON:0001049,6.72e-42,56;UBERON:0005068,6.72e-42,56;UBERON:0006241,6.72e-42,56;UBERON:0007135,6.72e-42,56;UBERON:0000955,7.77e-37,68;UBERON:0006238,7.77e-37,68;UBERON:0001017,2.40e-30,81;UBERON:0002780,4.00e-29,41;UBERON:0001890,4.00e-29,41;UBERON:0003080,4.00e-29,41;UBERON:0006240,4.00e-29,41;UBERON:0003075,2.17e-27,82;UBERON:0007284,2.17e-27,82;UBERON:0001016,6.31e-27,89;UBERON:0002346,6.31e-26,86;UBERON:0002791,5.55e-24,32;UBERON:0010371,5.73e-23,104;UBERON:0003528,1.78e-22,34;UBERON:0002020,1.78e-22,34;UBERON:0001893,1.78e-22,34;UBERON:0002619,3.64e-20,22;UBERON:0001869,4.52e-20,32;UBERON:0010314,5.69e-19,132;UBERON:0003056,1.03e-18,61;UBERON:0007023,2.52e-18,114;UBERON:0000956,1.16e-17,25;UBERON:0000203,1.16e-17,25;UBERON:0001950,1.39e-17,20;UBERON:0004733,2.84e-17,12;UBERON:0002028,2.84e-17,12;UBERON:0007277,2.84e-17,12;UBERON:0004732,6.63e-16,13;UBERON:0003076,1.03e-13,15;UBERON:0003057,1.03e-13,15;UBERON:0004121,2.01e-13,171;UBERON:0000924,2.01e-13,171;UBERON:0006601,2.01e-13,171;UBERON:0011216,1.50e-12,223;UBERON:0002680,7.25e-11,9;UBERON:0001895,7.25e-11,9;UBERON:0010092,7.25e-11,9;UBERON:0002420,1.73e-10,9;UBERON:0007245,1.73e-10,9;UBERON:0010009,1.73e-10,9;UBERON:0010011,1.73e-10,9;UBERON:0000454,1.73e-10,9;UBERON:0000025,2.23e-10,192;UBERON:0002037,9.35e-10,6;UBERON:0006215,9.35e-10,6;UBERON:0002298,3.57e-09,6;UBERON:0001896,1.14e-08,3;UBERON:0005290,1.14e-08,3;UBERON:0010096,1.14e-08,3;UBERON:0001871,2.27e-08,6;UBERON:0004111,2.54e-08,240;UBERON:0001894,2.78e-08,7;UBERON:0006222,2.78e-08,7;UBERON:0009663,5.96e-08,7;UBERON:0002038,2.23e-07,1;UBERON:0009661,2.23e-07,1;UBERON:0002950,2.23e-07,1;UBERON:0001891,2.23e-07,1;UBERON:0009616,2.23e-07,1;UBERON:0010286,2.23e-07,1;UBERON:0000996,4.60e-07,1;UBERON:0003112,4.89e-07,1;UBERON:0011158,4.89e-07,1;UBERON:0003128,4.89e-07,1;UBERON:0001703,4.89e-07,1;UBERON:0002241,4.89e-07,1;UBERON:0004761,4.89e-07,1;UBERON:0009617,4.89e-07,1;UBERON:0006834,6.20e-07,1;UBERON:0002784,6.22e-07,4;UBERON:0003296,8.10e-07,4;UBERON:0010133,8.10e-07,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.527533956456907,0,0,0,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0,0.572471974262113,0.547497700291537,0.627713197974014,0.229240217243854,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.768547918354051,0.260118695119756,0.328875809207352,0.552700035571697,0.289803085735052,0.296573126324121,0,1.04535523804977,0.453237370790265,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.189069634328136,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0,0.302714855289863,0,0,0.312160076830321,0,0,0,0.323745888736263,0,0,0.245668634623536,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.412210116953756,0.257640540045629,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,1.71072446022705,0,0.300343057843917,0,0.336393253036082,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0.500170521059677,0,0.415941723061614,0.535286966391485,0.473107245101804,0.702848489956279,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0.177561725313127,0,0.519254429183621,0,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0.366277859273374,0.330037999682352,0,0,0,0.290012154876366,0,0,0.413509717453592,0.322260734604821,0.580066775656914,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,0,0.987884678879706,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,1.92495971052672,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0.284136146806413,0,0,0,0.994147647766298,1.68803299692615,0.779160935160341,0,0,0.19924798825107,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0,0,0,0.227586896570999,0,0,1.37897349296586,0,0.520874984799877,0.885741385813839,1.08536794762867,1.52581736317083,7.40881041539205,2.36438095162838,0,0.21787692703798,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0.522109747527277,0.876214728748802,0,0.937057782901357,0,0,0.485560759068186,0,0,2.75465485467441,0.063186579628488,0.150323419414493,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0,0.174118413160805,0,0.859930162358083,0.0967563312890851,0.219267951258557,0.0821154570532092,0.193978032976839,0.176512253383001,0.451961481561065,0,0,0.443175571691151,0,0,0,0.19980960958213,0,0.687219576995494,0.343189995723929,0,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0,0.600420288709789,1.23214841002794,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,2.04305109167363,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0.728994679896296,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.775697738169303,0.92562821219883,0,0,0,0.471612915298998,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.732157589411779,2.253436752717,1.14681839138014,1.77486482458964,0.558867626472451,0.276697269872462,0,0,0,0,0.936669811613763,0.434763085832475,0,0.467426619694449,0,0,0.754703705257725,0.889811221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| ||
|short_description=p3@CCDC3 | |short_description=p3@CCDC3 | ||
}} | }} |
Latest revision as of 02:47, 17 September 2015
Short description: | p3@CCDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC3_5end |
Coexpression cluster: | C279_parietal_cerebellum_occipital_temporal_middle_duodenum_medial |
Association with transcript: | -261bp_to_uc001ilr.2, uc009xjc.1, uc009xjd.1_5end |
EntrezGene: | CCDC3 |
HGNC: | 23813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data