FFCP PHASE1:Hg19::chr17:6983594..6983619,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:6983594..6983619,- to FFCP PHASE1:Hg19::chr17:6983594..6983619,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10462 | |EntrezGene=10462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16916 | |HGNC=16916 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUN9 | |UniProt=Q8IUN9 | ||
|association_with_transcript=0bp_to_ENST00000254868,ENST00000416562,NM_006344,NM_182906,uc002gej.2,uc002gek.2,uc002gel.2,uc010clv.1_5end | |||
|cluster_id=chr17:6983594..6983619,- | |||
|coexpression_cluster_id=C1560 | |||
|description=CAGE_peak_2_at_CLEC10A_5end | |||
|id=chr17:6983594..6983619,- | |||
|ontology_enrichment_celltype=CL:0002009!2.63e-36!65;CL:0002194!2.88e-36!63;CL:0000576!2.88e-36!63;CL:0000040!2.88e-36!63;CL:0000559!2.88e-36!63;CL:0000557!2.88e-34!71;CL:0000766!3.24e-34!76;CL:0000839!2.12e-33!70;CL:0002057!3.55e-32!42;CL:0000860!4.41e-29!45;CL:0000738!1.08e-23!140;CL:0000763!1.34e-23!112;CL:0000049!1.34e-23!112;CL:0002087!3.91e-23!119;CL:0002031!1.23e-20!124;CL:0000037!5.62e-20!172;CL:0000566!5.62e-20!172;CL:0000988!1.41e-17!182;CL:0002032!8.87e-17!165;CL:0000837!8.87e-17!165;CL:0002393!1.89e-07!9;CL:0002397!1.89e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-21;33!CL:0002057;3.80e-21;33!CL:0000473;1.84e-20;39!CL:0000234;1.84e-20;39!CL:0000576;3.13e-20;48!CL:0000766;9.10e-13;69!CL:0002393;3.62e-10;6!CL:0002397;3.62e-10;6!CL:0000840;1.91e-07;5!CL:0000763;5.38e-07;100!CL:0002619;6.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.75e-37,61;CL:0002194,5.58e-37,59;CL:0000576,5.58e-37,59;CL:0000040,5.58e-37,59;CL:0000559,5.58e-37,59;CL:0000766,2.25e-33,72;CL:0000557,9.33e-33,67;CL:0000839,1.11e-31,66;CL:0000473,2.63e-31,48;CL:0000234,2.63e-31,48;CL:0000860,1.66e-28,42;CL:0002057,1.66e-28,42;CL:0000738,1.92e-21,136;CL:0000763,4.12e-21,108;CL:0000049,4.12e-21,108;CL:0002087,5.50e-21,115;CL:0002031,4.26e-17,120;CL:0000037,4.75e-16,168;CL:0000988,1.96e-14,177;CL:0002032,3.57e-13,161;CL:0000837,3.57e-13,161;CL:0000840,2.99e-07,5;CL:0001029,2.99e-07,5;CL:0002619,6.82e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-20;42!CL:0000049;6.96e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.32e-41!112;UBERON:0002390!2.54e-40!102;UBERON:0003061!2.54e-40!102;UBERON:0007023!2.43e-31!115;UBERON:0002371!1.89e-29!80;UBERON:0002405!2.98e-26!115;UBERON:0001474!4.32e-26!86;UBERON:0004765!2.42e-20!101;UBERON:0001434!2.42e-20!101;UBERON:0003081!9.82e-19!216;UBERON:0000178!4.50e-11!15;UBERON:0000179!4.50e-11!15;UBERON:0000463!4.50e-11!15;UBERON:0002204!3.42e-09!167;UBERON:0000926!2.05e-07!448;UBERON:0004120!2.05e-07!448;UBERON:0006603!2.05e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.67e-15;15!UBERON:0000179;6.67e-15;15!UBERON:0000463;6.67e-15;15!UBERON:0002390;8.23e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.52e-39,98;UBERON:0003061,4.52e-39,98;UBERON:0002193,1.59e-38,108;UBERON:0002371,2.58e-27,76;UBERON:0002405,2.50e-26,93;UBERON:0007023,1.89e-24,114;UBERON:0001474,2.31e-24,82;UBERON:0004765,4.68e-21,90;UBERON:0003081,1.37e-19,203;UBERON:0001434,1.07e-17,100;UBERON:0000178,5.52e-15,15;UBERON:0000179,5.52e-15,15;UBERON:0000463,5.52e-15,15;UBERON:0000926,1.71e-12,315;UBERON:0004120,1.71e-12,315;UBERON:0006603,1.71e-12,315;UBERON:0002204,5.95e-09,167 | |||
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| ||
|short_description=p2@CLEC10A | |||
}} | }} |
Latest revision as of 03:19, 17 September 2015
Short description: | p2@CLEC10A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLEC10A_5end |
Coexpression cluster: | C1560_CD14_Dendritic_Macrophage_dura_Monocytederived_lymph_left |
Association with transcript: | 0bp_to_ENST00000254868, ENST00000416562, NM_006344, NM_182906, uc002gej.2, uc002gek.2, uc002gel.2, uc010clv.1_5end |
EntrezGene: | CLEC10A |
HGNC: | 16916 |
UniProt: | Q8IUN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.75e-37 | 61 |
monopoietic cell | 5.58e-37 | 59 |
monocyte | 5.58e-37 | 59 |
monoblast | 5.58e-37 | 59 |
promonocyte | 5.58e-37 | 59 |
myeloid leukocyte | 2.25e-33 | 72 |
granulocyte monocyte progenitor cell | 9.33e-33 | 67 |
myeloid lineage restricted progenitor cell | 1.11e-31 | 66 |
defensive cell | 2.63e-31 | 48 |
phagocyte | 2.63e-31 | 48 |
classical monocyte | 1.66e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-28 | 42 |
leukocyte | 1.92e-21 | 136 |
myeloid cell | 4.12e-21 | 108 |
common myeloid progenitor | 4.12e-21 | 108 |
nongranular leukocyte | 5.50e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 4.26e-17 | 120 |
hematopoietic stem cell | 4.75e-16 | 168 |
hematopoietic cell | 1.96e-14 | 177 |
hematopoietic oligopotent progenitor cell | 3.57e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.57e-13 | 161 |
immature conventional dendritic cell | 2.99e-07 | 5 |
common dendritic progenitor | 2.99e-07 | 5 |
adult endothelial progenitor cell | 6.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.52e-39 | 98 |
blood island | 4.52e-39 | 98 |
hemolymphoid system | 1.59e-38 | 108 |
bone marrow | 2.58e-27 | 76 |
immune system | 2.50e-26 | 93 |
adult organism | 1.89e-24 | 114 |
bone element | 2.31e-24 | 82 |
skeletal element | 4.68e-21 | 90 |
lateral plate mesoderm | 1.37e-19 | 203 |
skeletal system | 1.07e-17 | 100 |
blood | 5.52e-15 | 15 |
haemolymphatic fluid | 5.52e-15 | 15 |
organism substance | 5.52e-15 | 15 |
mesoderm | 1.71e-12 | 315 |
mesoderm-derived structure | 1.71e-12 | 315 |
presumptive mesoderm | 1.71e-12 | 315 |
musculoskeletal system | 5.95e-09 | 167 |