FFCP PHASE1:Hg19::chr13:32838839..32838850,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:32838839..32838850,+
|short_description=p20@FRY
|description=CAGE_peak_20_at_FRY_5end
|association_with_transcript=34bp_to_ENST00000542859,uc010tdx.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10129 | |EntrezGene=10129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20367 | |HGNC=20367 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4D2 | |UniProt=F5H4D2 | ||
|association_with_transcript=34bp_to_ENST00000542859,uc010tdx.1_5end | |||
|cluster_id=chr13:32838839..32838850,+ | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_20_at_FRY_5end | |||
|id=chr13:32838839..32838850,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.85e-68!24;CL:0000115!3.63e-53!35;CL:0000071!1.40e-51!18;CL:0002546!1.40e-51!18;CL:0002078!1.07e-40!44;CL:0000213!1.16e-29!57;CL:0000215!1.16e-29!57;CL:1000413!4.97e-26!9;CL:0002543!9.15e-19!6;CL:0002544!2.58e-18!6;CL:0005020!3.35e-18!6;CL:0002138!3.35e-18!6;CL:0005022!3.35e-18!6;CL:0000076!2.06e-11!62;CL:0000222!1.80e-10!119;CL:0002618!2.36e-10!3;CL:0002144!5.30e-10!3;CL:0002545!3.13e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.09e-98;24!CL:0000115;2.75e-75;36!CL:0000071;5.16e-74;18!CL:0002078;2.22e-43;45!CL:0002543;3.95e-40;6!CL:0002544;7.89e-39;6!CL:0000213;1.01e-33;58!CL:0000215;1.01e-33;58!CL:0002618;1.88e-29;3!CL:1000413;6.57e-26;9!CL:0002138;9.29e-26;6!CL:0002545;1.40e-19;2!CL:0000076;2.06e-14;63!CL:0002144;6.95e-14;3!CL:0002188;2.16e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.74e-99,24;CL:0000115,2.00e-92,36;CL:0000071,3.01e-74,18;CL:0002546,3.01e-74,18;CL:0002078,1.88e-73,45;CL:0000213,1.98e-56,58;CL:0000215,1.98e-56,58;CL:0002543,2.65e-40,6;CL:0002544,4.03e-39,6;CL:0002618,9.11e-30,3;CL:1000413,4.21e-26,9;CL:0005020,9.92e-26,6;CL:0002138,9.92e-26,6;CL:0005022,9.92e-26,6;CL:0000222,1.12e-25,121;CL:0000076,5.90e-20,63;CL:0002545,9.60e-20,2;CL:0002144,9.60e-14,3;CL:0000066,3.22e-12,253;CL:0002321,7.51e-11,250;CL:0002188,2.51e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002546;5.16e-74;18!CL:0005022;9.29e-26;6!CL:0000222;3.98e-12;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;5.16e-74;18!UBERON:0001986;5.16e-74;18!UBERON:0004852;5.16e-74;18!UBERON:0000487;2.93e-60;22!UBERON:0006914;7.92e-53;25!UBERON:0000490;5.50e-41;33!UBERON:0001638;9.07e-27;9!UBERON:0003920;9.07e-27;9!UBERON:0004582;9.07e-27;9!UBERON:0003915;6.57e-26;9!UBERON:0004700;6.57e-26;9!UBERON:0001917;6.57e-26;9!UBERON:0000055;5.20e-22;65!UBERON:0005800;1.40e-19;2!UBERON:0001515;1.40e-19;2!UBERON:0001473;2.12e-19;8!UBERON:0004536;2.12e-19;8!UBERON:0006558;2.12e-19;8!UBERON:0002066;6.08e-18;5!UBERON:0007500;4.70e-17;56!UBERON:0001981;4.70e-17;56!UBERON:0004537;4.70e-17;56!UBERON:0002465;1.42e-15;10!UBERON:0002049;6.73e-15;75!UBERON:0007798;6.73e-15;75!UBERON:0010523;6.95e-14;3!UBERON:0001915;6.95e-14;3!UBERON:0001982;6.95e-14;3!UBERON:0003914;1.09e-13;74!UBERON:0001009;1.01e-11;112!UBERON:0004535;2.87e-11;109!UBERON:0000947;4.49e-11;21!UBERON:0010191;4.49e-11;21!UBERON:0010260;3.21e-10;9!UBERON:0000025;2.97e-09;93!UBERON:0000483;1.44e-07;136!UBERON:0004111;1.49e-07;130!UBERON:0004573;3.29e-07;33!UBERON:0004571;3.29e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.01e-74,18;UBERON:0001986,3.01e-74,18;UBERON:0004852,3.01e-74,18;UBERON:0000487,1.89e-60,22;UBERON:0006914,5.38e-53,25;UBERON:0000055,5.05e-38,68;UBERON:0002049,7.90e-33,78;UBERON:0007798,7.90e-33,78;UBERON:0001638,6.96e-27,9;UBERON:0003920,6.96e-27,9;UBERON:0004582,6.96e-27,9;UBERON:0003915,4.21e-26,9;UBERON:0004700,4.21e-26,9;UBERON:0001917,4.21e-26,9;UBERON:0007500,2.30e-25,59;UBERON:0001981,2.30e-25,59;UBERON:0004537,2.30e-25,59;UBERON:0006965,2.30e-25,59;UBERON:0004535,9.13e-23,109;UBERON:0001009,4.36e-22,112;UBERON:0005800,9.60e-20,2;UBERON:0001515,9.60e-20,2;UBERON:0001473,2.23e-19,8;UBERON:0004536,2.23e-19,8;UBERON:0006558,2.23e-19,8;UBERON:0002066,3.95e-18,5;UBERON:0004872,1.92e-17,83;UBERON:0003914,6.05e-16,117;UBERON:0002465,1.48e-15,10;UBERON:0010523,9.60e-14,3;UBERON:0001915,9.60e-14,3;UBERON:0001982,9.60e-14,3;UBERON:0004111,5.88e-13,240;UBERON:0000947,3.74e-11,21;UBERON:0010191,3.74e-11,21;UBERON:0000490,2.05e-10,148;UBERON:0010260,2.53e-10,9;UBERON:0000025,1.06e-08,192;UBERON:0003081,4.25e-08,203;UBERON:0004573,4.81e-07,33;UBERON:0004571,4.81e-07,33 | |||
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| ||
|short_description=p20@FRY | |||
}} | }} |
Latest revision as of 03:55, 17 September 2015
Short description: | p20@FRY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_FRY_5end |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | 34bp_to_ENST00000542859, uc010tdx.1_5end |
EntrezGene: | FRY |
HGNC: | 20367 |
UniProt: | F5H4D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.74e-99 | 24 |
endothelial cell | 2.00e-92 | 36 |
blood vessel endothelial cell | 3.01e-74 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.01e-74 | 18 |
meso-epithelial cell | 1.88e-73 | 45 |
lining cell | 1.98e-56 | 58 |
barrier cell | 1.98e-56 | 58 |
vein endothelial cell | 2.65e-40 | 6 |
aortic endothelial cell | 4.03e-39 | 6 |
endothelial cell of umbilical vein | 9.11e-30 | 3 |
endothelial cell of artery | 4.21e-26 | 9 |
lymphangioblast | 9.92e-26 | 6 |
endothelial cell of lymphatic vessel | 9.92e-26 | 6 |
vascular lymphangioblast | 9.92e-26 | 6 |
mesodermal cell | 1.12e-25 | 121 |
squamous epithelial cell | 5.90e-20 | 63 |
thoracic aorta endothelial cell | 9.60e-20 | 2 |
capillary endothelial cell | 9.60e-14 | 3 |
epithelial cell | 3.22e-12 | 253 |
embryonic cell | 7.51e-11 | 250 |
glomerular endothelial cell | 2.51e-08 | 5 |