FFCP PHASE1:Hg19::chr7:150498348..150498411,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28959 | |EntrezGene=28959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29596 | |HGNC=29596 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YBM2 | |UniProt=Q3YBM2 | ||
|association_with_transcript=36bp_to_ENST00000447204,NM_014020,uc003whw.3_5end | |association_with_transcript=36bp_to_ENST00000447204,NM_014020,uc003whw.3_5end | ||
|cluster_id=chr7:150498348..150498411,- | |||
|coexpression_cluster_id=C1988 | |coexpression_cluster_id=C1988 | ||
|description=CAGE_peak_2_at_TMEM176B_5end | |description=CAGE_peak_2_at_TMEM176B_5end | ||
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|ontology_enrichment_celltype=CL:0002057!7.14e-36!42;CL:0002194!9.72e-36!63;CL:0000576!9.72e-36!63;CL:0000040!9.72e-36!63;CL:0000559!9.72e-36!63;CL:0002009!6.20e-34!65;CL:0000839!3.01e-33!70;CL:0000557!1.90e-32!71;CL:0000860!3.25e-32!45;CL:0000766!3.26e-32!76;CL:0000763!3.56e-18!112;CL:0000049!3.56e-18!112;CL:0000738!1.31e-15!140;CL:0002087!7.06e-15!119;CL:0002031!6.37e-13!124;CL:0000037!4.38e-09!172;CL:0000566!4.38e-09!172;CL:0002032!2.81e-08!165;CL:0000837!2.81e-08!165;CL:0000988!1.63e-07!182 | |ontology_enrichment_celltype=CL:0002057!7.14e-36!42;CL:0002194!9.72e-36!63;CL:0000576!9.72e-36!63;CL:0000040!9.72e-36!63;CL:0000559!9.72e-36!63;CL:0002009!6.20e-34!65;CL:0000839!3.01e-33!70;CL:0000557!1.90e-32!71;CL:0000860!3.25e-32!45;CL:0000766!3.26e-32!76;CL:0000763!3.56e-18!112;CL:0000049!3.56e-18!112;CL:0000738!1.31e-15!140;CL:0002087!7.06e-15!119;CL:0002031!6.37e-13!124;CL:0000037!4.38e-09!172;CL:0000566!4.38e-09!172;CL:0002032!2.81e-08!165;CL:0000837!2.81e-08!165;CL:0000988!1.63e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-35;33!CL:0002057;2.47e-35;33!CL:0000473;7.40e-35;39!CL:0000234;7.40e-35;39!CL:0000576;1.90e-28;48!CL:0000766;1.59e-18;69!CL:0000235;3.01e-08;6!CL:0000763;4.79e-08;100 | |ontology_enrichment_celltype_v019=CL:0000860;2.47e-35;33!CL:0002057;2.47e-35;33!CL:0000473;7.40e-35;39!CL:0000234;7.40e-35;39!CL:0000576;1.90e-28;48!CL:0000766;1.59e-18;69!CL:0000235;3.01e-08;6!CL:0000763;4.79e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.32e-50,48;CL:0000234,1.32e-50,48;CL:0002194,3.65e-47,59;CL:0000576,3.65e-47,59;CL:0000040,3.65e-47,59;CL:0000559,3.65e-47,59;CL:0002009,5.25e-45,61;CL:0000860,1.57e-43,42;CL:0002057,1.57e-43,42;CL:0000839,3.44e-40,66;CL:0000557,2.59e-39,67;CL:0000766,4.04e-38,72;CL:0000763,1.01e-23,108;CL:0000049,1.01e-23,108;CL:0002087,1.52e-18,115;CL:0000738,8.24e-18,136;CL:0002031,3.90e-15,120;CL:0000037,1.45e-11,168;CL:0002032,8.87e-11,161;CL:0000837,8.87e-11,161;CL:0000988,4.00e-10,177;CL:0000235,2.54e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.71e-31;42!CL:0000049;2.13e-08;108 | |ontology_enrichment_development_v019=CL:0002057;2.71e-31;42!CL:0000049;2.13e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.85e-43!115;UBERON:0002390!4.53e-27!102;UBERON:0003061!4.53e-27!102;UBERON:0002371!3.31e-26!80;UBERON:0002193!2.00e-25!112;UBERON:0002405!3.06e-24!115;UBERON:0001474!7.97e-23!86;UBERON:0004765!2.81e-18!101;UBERON:0001434!2.81e-18!101;UBERON:0000062!1.24e-14!511;UBERON:0001049!5.73e-14!57;UBERON:0005068!5.73e-14!57;UBERON:0006241!5.73e-14!57;UBERON:0007135!5.73e-14!57;UBERON:0003080!3.10e-12!42;UBERON:0002780!6.81e-12!41;UBERON:0001890!6.81e-12!41;UBERON:0006240!6.81e-12!41;UBERON:0000922!2.68e-11!612;UBERON:0000467!2.80e-11!625;UBERON:0000480!3.64e-11!626;UBERON:0002050!1.24e-10!605;UBERON:0005423!1.24e-10!605;UBERON:0000468!1.35e-10!659;UBERON:0002616!1.95e-10!59;UBERON:0000923!2.13e-10!604;UBERON:0005291!2.13e-10!604;UBERON:0006598!2.13e-10!604;UBERON:0002532!2.13e-10!604;UBERON:0002020!2.57e-10!34;UBERON:0003528!2.57e-10!34;UBERON:0003075!4.20e-10!86;UBERON:0007284!4.20e-10!86;UBERON:0001893!5.92e-10!34;UBERON:0002204!9.67e-10!167;UBERON:0002791!1.06e-09!33;UBERON:0002346!1.68e-09!90;UBERON:0001869!3.72e-09!32;UBERON:0001017!1.66e-08!82;UBERON:0000955!3.18e-08!69;UBERON:0006238!3.18e-08!69;UBERON:0005743!3.24e-08!86;UBERON:0002619!5.50e-08!22;UBERON:0003081!1.18e-07!216;UBERON:0003056!1.18e-07!61;UBERON:0000073!3.29e-07!94;UBERON:0001016!3.29e-07!94;UBERON:0001950!4.29e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!8.85e-43!115;UBERON:0002390!4.53e-27!102;UBERON:0003061!4.53e-27!102;UBERON:0002371!3.31e-26!80;UBERON:0002193!2.00e-25!112;UBERON:0002405!3.06e-24!115;UBERON:0001474!7.97e-23!86;UBERON:0004765!2.81e-18!101;UBERON:0001434!2.81e-18!101;UBERON:0000062!1.24e-14!511;UBERON:0001049!5.73e-14!57;UBERON:0005068!5.73e-14!57;UBERON:0006241!5.73e-14!57;UBERON:0007135!5.73e-14!57;UBERON:0003080!3.10e-12!42;UBERON:0002780!6.81e-12!41;UBERON:0001890!6.81e-12!41;UBERON:0006240!6.81e-12!41;UBERON:0000922!2.68e-11!612;UBERON:0000467!2.80e-11!625;UBERON:0000480!3.64e-11!626;UBERON:0002050!1.24e-10!605;UBERON:0005423!1.24e-10!605;UBERON:0000468!1.35e-10!659;UBERON:0002616!1.95e-10!59;UBERON:0000923!2.13e-10!604;UBERON:0005291!2.13e-10!604;UBERON:0006598!2.13e-10!604;UBERON:0002532!2.13e-10!604;UBERON:0002020!2.57e-10!34;UBERON:0003528!2.57e-10!34;UBERON:0003075!4.20e-10!86;UBERON:0007284!4.20e-10!86;UBERON:0001893!5.92e-10!34;UBERON:0002204!9.67e-10!167;UBERON:0002791!1.06e-09!33;UBERON:0002346!1.68e-09!90;UBERON:0001869!3.72e-09!32;UBERON:0001017!1.66e-08!82;UBERON:0000955!3.18e-08!69;UBERON:0006238!3.18e-08!69;UBERON:0005743!3.24e-08!86;UBERON:0002619!5.50e-08!22;UBERON:0003081!1.18e-07!216;UBERON:0003056!1.18e-07!61;UBERON:0000073!3.29e-07!94;UBERON:0001016!3.29e-07!94;UBERON:0001950!4.29e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.29e-08;17 | |ontology_enrichment_uberon_v019=UBERON:0000160;4.29e-08;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.95e-33,98;UBERON:0003061,6.95e-33,98;UBERON:0002371,1.73e-32,76;UBERON:0002405,2.23e-31,93;UBERON:0002193,1.24e-30,108;UBERON:0001474,8.54e-29,82;UBERON:0007023,2.35e-27,114;UBERON:0004765,1.15e-24,90;UBERON:0001434,1.77e-20,100;UBERON:0003081,4.77e-13,203;UBERON:0000923,4.96e-12,560;UBERON:0010316,4.96e-12,560;UBERON:0005291,4.96e-12,560;UBERON:0006598,4.96e-12,560;UBERON:0010317,4.96e-12,560;UBERON:0002532,4.96e-12,560;UBERON:0002050,1.14e-11,564;UBERON:0005423,3.62e-11,581;UBERON:0000922,1.20e-10,592;UBERON:0002204,2.90e-10,167;UBERON:0000926,7.90e-09,315;UBERON:0004120,7.90e-09,315;UBERON:0006603,7.90e-09,315;UBERON:0000160,2.50e-08,17;UBERON:0005409,5.75e-08,25 | |||
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| ||
|short_description=p2@TMEM176B | |short_description=p2@TMEM176B | ||
}} | }} |
Latest revision as of 04:04, 17 September 2015
Short description: | p2@TMEM176B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM176B_5end |
Coexpression cluster: | C1988_Macrophage_CD14_Hepatocyte_Monocytederived_liver_migratory_CD14CD16 |
Association with transcript: | 36bp_to_ENST00000447204, NM_014020, uc003whw.3_5end |
EntrezGene: | TMEM176B |
HGNC: | 29596 |
UniProt: | Q3YBM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.32e-50 | 48 |
phagocyte | 1.32e-50 | 48 |
monopoietic cell | 3.65e-47 | 59 |
monocyte | 3.65e-47 | 59 |
monoblast | 3.65e-47 | 59 |
promonocyte | 3.65e-47 | 59 |
macrophage dendritic cell progenitor | 5.25e-45 | 61 |
classical monocyte | 1.57e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-43 | 42 |
myeloid lineage restricted progenitor cell | 3.44e-40 | 66 |
granulocyte monocyte progenitor cell | 2.59e-39 | 67 |
myeloid leukocyte | 4.04e-38 | 72 |
myeloid cell | 1.01e-23 | 108 |
common myeloid progenitor | 1.01e-23 | 108 |
nongranular leukocyte | 1.52e-18 | 115 |
leukocyte | 8.24e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 3.90e-15 | 120 |
hematopoietic stem cell | 1.45e-11 | 168 |
hematopoietic oligopotent progenitor cell | 8.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.87e-11 | 161 |
hematopoietic cell | 4.00e-10 | 177 |
macrophage | 2.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.95e-33 | 98 |
blood island | 6.95e-33 | 98 |
bone marrow | 1.73e-32 | 76 |
immune system | 2.23e-31 | 93 |
hemolymphoid system | 1.24e-30 | 108 |
bone element | 8.54e-29 | 82 |
adult organism | 2.35e-27 | 114 |
skeletal element | 1.15e-24 | 90 |
skeletal system | 1.77e-20 | 100 |
lateral plate mesoderm | 4.77e-13 | 203 |
germ layer | 4.96e-12 | 560 |
germ layer / neural crest | 4.96e-12 | 560 |
embryonic tissue | 4.96e-12 | 560 |
presumptive structure | 4.96e-12 | 560 |
germ layer / neural crest derived structure | 4.96e-12 | 560 |
epiblast (generic) | 4.96e-12 | 560 |
embryonic structure | 1.14e-11 | 564 |
developing anatomical structure | 3.62e-11 | 581 |
embryo | 1.20e-10 | 592 |
musculoskeletal system | 2.90e-10 | 167 |
mesoderm | 7.90e-09 | 315 |
mesoderm-derived structure | 7.90e-09 | 315 |
presumptive mesoderm | 7.90e-09 | 315 |
intestine | 2.50e-08 | 17 |
gastrointestinal system | 5.75e-08 | 25 |