FFCP PHASE1:Hg19::chr12:125348434..125348445,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=949 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1664 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000539320_5end | |||
|cluster_id=chr12:125348434..125348445,- | |||
|coexpression_cluster_id=C3250 | |||
|description=CAGE_peak_4_at_SCARB1_5end | |||
|id=chr12:125348434..125348445,- | |||
|ontology_enrichment_celltype=CL:0000066!1.20e-28!254;CL:0000220!5.02e-17!246;CL:0002321!1.73e-16!248;CL:0000213!1.61e-09!57;CL:0000215!1.61e-09!57;CL:0000222!8.87e-09!119;CL:0002078!1.21e-07!44;CL:0000076!1.84e-07!62;CL:0000223!2.42e-07!59;CL:0000115!2.42e-07!35;CL:0000548!4.51e-07!679;CL:0000004!4.51e-07!679;CL:0000255!4.51e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000147;7.88e-07;14!CL:0000115;9.02e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.38e-28,253;CL:0002321,5.11e-16,250;CL:0000213,7.74e-10,58;CL:0000215,7.74e-10,58;CL:0000222,1.50e-08,121;CL:0002078,8.12e-08,45;CL:0000223,1.09e-07,58;CL:0000115,1.58e-07,36;CL:0000076,6.25e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.96e-12!235;DOID:14566!5.04e-12!239;DOID:305!1.14e-09!106;DOID:0050687!5.52e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.36e-11,235;DOID:14566,9.69e-11,239;DOID:305,3.25e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.98e-12!129;UBERON:0004185!1.98e-12!129;UBERON:0001007!1.03e-11!155;UBERON:0001555!1.03e-11!155;UBERON:0007026!1.03e-11!155;UBERON:0004119!1.39e-11!169;UBERON:0000925!1.39e-11!169;UBERON:0006595!1.39e-11!169;UBERON:0003104!2.15e-10!238;UBERON:0009142!2.15e-10!238;UBERON:0000119!6.64e-10!312;UBERON:0000077!7.69e-10!130;UBERON:0005172!1.82e-09!55;UBERON:0005173!1.82e-09!55;UBERON:0000481!2.36e-09!347;UBERON:0000483!2.49e-09!309;UBERON:0005177!2.86e-09!107;UBERON:0000490!3.60e-09!138;UBERON:0002417!6.43e-09!61;UBERON:0000916!6.43e-09!61;UBERON:0001048!7.00e-09!168;UBERON:0001041!1.83e-08!98;UBERON:0005911!1.99e-08!82;UBERON:0002107!4.16e-08!19;UBERON:0006925!4.16e-08!19;UBERON:0008836!4.16e-08!19;UBERON:0009569!4.46e-08!113;UBERON:0002365!6.42e-08!31;UBERON:0002330!6.42e-08!31;UBERON:0009497!9.84e-08!25;UBERON:0000015!9.84e-08!25;UBERON:0002423!9.84e-08!25;UBERON:0006235!9.84e-08!25;UBERON:0004161!9.84e-08!25;UBERON:0002100!1.41e-07!216;UBERON:0000063!1.66e-07!97;UBERON:0003914!2.23e-07!118;UBERON:0001737!3.02e-07!9;UBERON:0008835!3.18e-07!22;UBERON:0003894!3.18e-07!22;UBERON:0007499!3.93e-07!25;UBERON:0003929!4.00e-07!54;UBERON:0000477!4.50e-07!286;UBERON:0009854!5.38e-07!23;UBERON:0009856!6.18e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.28e-08;19!UBERON:0006925;2.28e-08;19!UBERON:0002423;3.32e-08;25!UBERON:0001737;1.99e-07;9!UBERON:0001557;1.99e-07;9!UBERON:0002365;2.41e-07;31!UBERON:0002330;2.41e-07;31!UBERON:0005172;6.58e-07;52!UBERON:0005173;6.58e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.92e-13,118;UBERON:0001007,9.57e-12,145;UBERON:0001555,9.57e-12,145;UBERON:0007026,9.57e-12,145;UBERON:0004119,2.45e-11,160;UBERON:0000925,2.45e-11,160;UBERON:0006595,2.45e-11,160;UBERON:0005172,7.48e-10,54;UBERON:0005173,7.48e-10,54;UBERON:0005177,2.30e-09,101;UBERON:0001041,3.33e-09,87;UBERON:0002417,3.47e-09,60;UBERON:0000916,3.47e-09,60;UBERON:0001048,2.60e-08,160;UBERON:0002107,2.97e-08,19;UBERON:0006925,2.97e-08,19;UBERON:0008836,2.97e-08,19;UBERON:0000119,4.35e-08,309;UBERON:0005911,4.39e-08,82;UBERON:0009497,7.15e-08,25;UBERON:0000015,7.15e-08,25;UBERON:0002423,7.15e-08,25;UBERON:0006235,7.15e-08,25;UBERON:0004161,7.15e-08,25;UBERON:0000490,8.62e-08,148;UBERON:0009569,1.15e-07,112;UBERON:0000483,1.44e-07,306;UBERON:0002365,1.53e-07,31;UBERON:0002330,1.53e-07,31;UBERON:0001737,2.25e-07,9;UBERON:0008835,2.37e-07,22;UBERON:0003894,2.37e-07,22;UBERON:0003914,2.82e-07,117;UBERON:0007499,2.94e-07,25;UBERON:0002100,3.61e-07,199;UBERON:0009854,4.06e-07,23;UBERON:0009856,4.68e-07,26;UBERON:0003929,8.86e-07,54 | |||
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| |||
|short_description=p4@SCARB1 | |||
}} |
Latest revision as of 04:37, 17 September 2015
Short description: | p4@SCARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCARB1_5end |
Coexpression cluster: | C3250_liver_Hepatocyte_Melanocyte_Monocytederived_placenta_Meningeal_Pericytes |
Association with transcript: | 0bp_to_ENST00000539320_5end |
EntrezGene: | SCARB1 |
HGNC: | 1664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.38e-28 | 253 |
embryonic cell | 5.11e-16 | 250 |
lining cell | 7.74e-10 | 58 |
barrier cell | 7.74e-10 | 58 |
mesodermal cell | 1.50e-08 | 121 |
meso-epithelial cell | 8.12e-08 | 45 |
endodermal cell | 1.09e-07 | 58 |
endothelial cell | 1.58e-07 | 36 |
squamous epithelial cell | 6.25e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.36e-11 | 235 |
disease of cellular proliferation | 9.69e-11 | 239 |
carcinoma | 3.25e-09 | 106 |