FFCP PHASE1:Hg19::chr2:142889013..142889024,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53353 | |EntrezGene=53353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6693 | |HGNC=6693 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZR2,Q96NT6 | |UniProt=Q9NZR2,Q96NT6 | ||
|association_with_transcript=245bp_to_ENST00000389484,NM_018557,uc002tvj.1,uc010fnl.1_5end | |association_with_transcript=245bp_to_ENST00000389484,NM_018557,uc002tvj.1,uc010fnl.1_5end | ||
|cluster_id=chr2:142889013..142889024,- | |||
|description=CAGE_peak_8_at_LRP1B_5end | |description=CAGE_peak_8_at_LRP1B_5end | ||
|id=chr2:142889013..142889024,- | |id=chr2:142889013..142889024,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.56e-16;1!UBERON:0010122;2.31e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.46e-72!57;UBERON:0005068!3.46e-72!57;UBERON:0006241!3.46e-72!57;UBERON:0007135!3.46e-72!57;UBERON:0002616!1.96e-62!59;UBERON:0002780!3.49e-59!41;UBERON:0001890!3.49e-59!41;UBERON:0006240!3.49e-59!41;UBERON:0001017!9.14e-59!82;UBERON:0003080!1.42e-57!42;UBERON:0000955!1.33e-56!69;UBERON:0006238!1.33e-56!69;UBERON:0005743!1.79e-55!86;UBERON:0000073!7.66e-54!94;UBERON:0001016!7.66e-54!94;UBERON:0002346!9.52e-53!90;UBERON:0003075!6.95e-51!86;UBERON:0007284!6.95e-51!86;UBERON:0002020!7.38e-48!34;UBERON:0003528!7.38e-48!34;UBERON:0001893!4.03e-47!34;UBERON:0002791!4.02e-45!33;UBERON:0001869!1.94e-43!32;UBERON:0003056!3.32e-39!61;UBERON:0007023!2.19e-33!115;UBERON:0000956!7.37e-32!25;UBERON:0000203!7.37e-32!25;UBERON:0000924!5.06e-30!173;UBERON:0006601!5.06e-30!173;UBERON:0000033!8.57e-30!123;UBERON:0002619!1.74e-29!22;UBERON:0000153!2.16e-29!129;UBERON:0007811!2.16e-29!129;UBERON:0001950!1.13e-28!20;UBERON:0004121!2.45e-28!169;UBERON:0000025!6.85e-18!194;UBERON:0002308!1.24e-17!9;UBERON:0000125!1.24e-17!9;UBERON:0000200!1.20e-15!6;UBERON:0003076!2.91e-15!15;UBERON:0003057!2.91e-15!15;UBERON:0002298!7.55e-15!8;UBERON:0002420!1.22e-13!9;UBERON:0007245!1.22e-13!9;UBERON:0010009!1.22e-13!9;UBERON:0010011!1.22e-13!9;UBERON:0000454!1.22e-13!9;UBERON:0001894!2.60e-13!7;UBERON:0006222!2.60e-13!7;UBERON:0000483!3.01e-13!309;UBERON:0009663!4.83e-13!7;UBERON:0000477!5.22e-13!286;UBERON:0000119!5.52e-13!312;UBERON:0004111!7.95e-13!241;UBERON:0004733!1.55e-12!12;UBERON:0002028!1.55e-12!12;UBERON:0007277!1.55e-12!12;UBERON:0000475!3.83e-12!365;UBERON:0001871!6.20e-12!7;UBERON:0004732!1.87e-11!13;UBERON:0000064!3.74e-10!219;UBERON:0002771!2.92e-09!3;UBERON:0002021!6.79e-09!5;UBERON:0000481!7.99e-09!347;UBERON:0001896!1.00e-08!3;UBERON:0005290!1.00e-08!3;UBERON:0010096!1.00e-08!3;UBERON:0006331!2.99e-08!3;UBERON:0000988!3.14e-08!3;UBERON:0000062!8.43e-08!511;UBERON:0000922!1.33e-07!612;UBERON:0000923!7.23e-07!604;UBERON:0005291!7.23e-07!604;UBERON:0006598!7.23e-07!604;UBERON:0002532!7.23e-07!604;UBERON:0002050!7.93e-07!605;UBERON:0005423!7.93e-07!605;UBERON:0002680!8.50e-07!9;UBERON:0001895!8.50e-07!9;UBERON:0010092!8.50e-07!9;UBERON:0001897!9.41e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.72e-38;22!UBERON:0000200;4.11e-38;6!UBERON:0000956;5.41e-34;25!UBERON:0000203;5.41e-34;25!UBERON:0001950;1.97e-32;20!UBERON:0002791;3.46e-31;32!UBERON:0001869;3.46e-31;32!UBERON:0002780;1.14e-30;41!UBERON:0001890;1.14e-30;41!UBERON:0002771;2.21e-29;2!UBERON:0002702;2.21e-29;2!UBERON:0001897;5.24e-29;2!UBERON:0010225;5.24e-29;2!UBERON:0001893;4.78e-26;34!UBERON:0003528;2.62e-25;34!UBERON:0002020;2.62e-25;34!UBERON:0001870;5.91e-20;3!UBERON:0000073;1.03e-19;53!UBERON:0002616;1.03e-19;53!UBERON:0001871;7.56e-19;6!UBERON:0002784;4.88e-15;4!UBERON:0000955;1.40e-12;68!UBERON:0000349;3.16e-12;5!UBERON:0001017;7.89e-11;75!UBERON:0001894;5.37e-09;7!UBERON:0001876;2.31e-08;2!UBERON:0001873;2.31e-08;2!UBERON:0001954;2.31e-08;2!UBERON:0003022;2.31e-08;2!UBERON:0002421;2.31e-08;2!UBERON:0002600;2.31e-08;2!UBERON:0001016;1.67e-07;83!UBERON:0002420;3.44e-07;9!UBERON:0007245;3.44e-07;9!UBERON:0010009;3.44e-07;9!UBERON:0010011;3.44e-07;9!UBERON:0000454;3.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.41e-39,41;UBERON:0001890,2.41e-39,41;UBERON:0003080,2.41e-39,41;UBERON:0006240,2.41e-39,41;UBERON:0002619,2.10e-38,22;UBERON:0000200,8.03e-38,6;UBERON:0000956,6.46e-34,25;UBERON:0000203,6.46e-34,25;UBERON:0002791,1.26e-33,32;UBERON:0001869,1.26e-33,32;UBERON:0001950,2.74e-32,20;UBERON:0003528,1.15e-31,34;UBERON:0002020,1.15e-31,34;UBERON:0001893,1.15e-31,34;UBERON:0000073,2.16e-30,53;UBERON:0002616,2.16e-30,53;UBERON:0002771,2.96e-29,2;UBERON:0001897,3.41e-29,2;UBERON:0010225,3.41e-29,2;UBERON:0002702,4.55e-29,2;UBERON:0001049,9.68e-29,56;UBERON:0005068,9.68e-29,56;UBERON:0006241,9.68e-29,56;UBERON:0007135,9.68e-29,56;UBERON:0003056,2.42e-26,61;UBERON:0000955,3.24e-23,68;UBERON:0006238,3.24e-23,68;UBERON:0001870,9.53e-20,3;UBERON:0001017,2.05e-19,81;UBERON:0003075,2.05e-19,82;UBERON:0007284,2.05e-19,82;UBERON:0001871,7.57e-19,6;UBERON:0002346,1.80e-18,86;UBERON:0010371,3.61e-18,104;UBERON:0001016,2.08e-17,89;UBERON:0002784,3.94e-15,4;UBERON:0000349,2.38e-12,5;UBERON:0010314,1.09e-11,132;UBERON:0007023,2.23e-11,114;UBERON:0004121,1.84e-10,171;UBERON:0000924,1.84e-10,171;UBERON:0006601,1.84e-10,171;UBERON:0001894,4.76e-09,7;UBERON:0006222,4.76e-09,7;UBERON:0001954,1.86e-08,2;UBERON:0003022,1.86e-08,2;UBERON:0002421,1.86e-08,2;UBERON:0002600,1.86e-08,2;UBERON:0001876,2.00e-08,2;UBERON:0001873,2.31e-08,2;UBERON:0010122,2.31e-08,2;UBERON:0000025,1.15e-07,192;UBERON:0002420,3.24e-07,9;UBERON:0007245,3.24e-07,9;UBERON:0010009,3.24e-07,9;UBERON:0010011,3.24e-07,9;UBERON:0000454,3.24e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,5.16013999977555,0,0,0,0,0,0,0,0,1.20596438625408,0,0.442317039724898,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0.313932918407225,0,3.69992409838731,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.09823638411767,1.001527445652,0.573409195690071,0.665574309221114,0.558867626472451,0,0.74988244777264,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.385375350578757,0,0.638535436228605,1.02558182120378,0.756215088665154,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,1.2401207790071,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.455324382702595,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,1.13776295448085,0,0.23806443146374,0,0,0,0.318235791390825,0.808468755832877,0,0,0,0,0,0.488419611665847,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,5.16013999977555,0,0,0,0,0,0,0,0,1.20596438625408,0,0.442317039724898,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0.313932918407225,0,3.69992409838731,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.09823638411767,1.001527445652,0.573409195690071,0.665574309221114,0.558867626472451,0,0.74988244777264,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.385375350578757,0,0.638535436228605,1.02558182120378,0.756215088665154,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,1.2401207790071,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.455324382702595,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,1.13776295448085,0,0.23806443146374,0,0,0,0.318235791390825,0.808468755832877,0,0,0,0,0,0.488419611665847,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p8@LRP1B | |short_description=p8@LRP1B | ||
}} | }} |
Latest revision as of 04:54, 17 September 2015
Short description: | p8@LRP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LRP1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 245bp_to_ENST00000389484, NM_018557, uc002tvj.1, uc010fnl.1_5end |
EntrezGene: | LRP1B |
HGNC: | 6693 |
UniProt: | Q9NZR2Q96NT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data