FFCP PHASE1:Hg19::chr20:57036925..57036961,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164284 | |EntrezGene=164284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26892 | |HGNC=26892 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000491015_5end | |association_with_transcript=74bp_to_ENST00000491015_5end | ||
|cluster_id=chr20:57036925..57036961,- | |||
|coexpression_cluster_id=C373 | |coexpression_cluster_id=C373 | ||
|description=CAGE_peak_9_at_APCDD1L_5end | |description=CAGE_peak_9_at_APCDD1L_5end | ||
|id=chr20:57036925..57036961,- | |id=chr20:57036925..57036961,- | ||
|ontology_enrichment_celltype=CL:0002076!7.93e-30!43;CL:0002368!3.62e-23!13;CL:0000223!1.11e-20!59;CL:0002621!2.18e-16!3;CL:0000066!9.96e-16!254;CL:0002251!2.62e-14!21;CL:0002159!5.06e-13!13;CL:0000076!1.23e-12!62;CL:0002202!3.57e-09!9;CL:0002632!3.57e-09!9;CL:0002328!7.90e-08!3;CL:0000220!9.69e-08!246;CL:0000240!1.01e-07!6;CL:0000311!1.01e-07!6;CL:0000079!1.01e-07!6;CL:0000237!1.01e-07!6;CL:0000036!1.01e-07!6;CL:0000357!1.01e-07!6;CL:0000114!1.01e-07!6;CL:0002166!1.18e-07!3;CL:0002321!1.24e-07!248;CL:0000068!1.49e-07!3;CL:0000069!1.49e-07!3;CL:0000307!1.49e-07!3;CL:0000377!1.49e-07!3;CL:0002582!3.92e-07!3 | |ontology_enrichment_celltype=CL:0002076!7.93e-30!43;CL:0002368!3.62e-23!13;CL:0000223!1.11e-20!59;CL:0002621!2.18e-16!3;CL:0000066!9.96e-16!254;CL:0002251!2.62e-14!21;CL:0002159!5.06e-13!13;CL:0000076!1.23e-12!62;CL:0002202!3.57e-09!9;CL:0002632!3.57e-09!9;CL:0002328!7.90e-08!3;CL:0000220!9.69e-08!246;CL:0000240!1.01e-07!6;CL:0000311!1.01e-07!6;CL:0000079!1.01e-07!6;CL:0000237!1.01e-07!6;CL:0000036!1.01e-07!6;CL:0000357!1.01e-07!6;CL:0000114!1.01e-07!6;CL:0002166!1.18e-07!3;CL:0002321!1.24e-07!248;CL:0000068!1.49e-07!3;CL:0000069!1.49e-07!3;CL:0000307!1.49e-07!3;CL:0000377!1.49e-07!3;CL:0002582!3.92e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.67e-30;3!CL:0002251;5.55e-18;20!CL:0002535;1.48e-12;2!CL:0002076;5.74e-09;42!CL:0000307;9.31e-09;3!CL:0002166;1.26e-08;3!CL:0000244;8.85e-07;4!CL:0002327;8.85e-07;4!CL:0000731;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.10e-30,3;CL:0002251,5.55e-18,20;CL:0002076,2.63e-13,42;CL:0002535,1.48e-12,2;CL:0000223,1.10e-09,58;CL:0000068,9.66e-09,3;CL:0000069,9.66e-09,3;CL:0000307,9.66e-09,3;CL:0000377,9.66e-09,3;CL:0002166,1.21e-08,3;CL:0000244,7.70e-07,4;CL:0000731,7.70e-07,4;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;9.31e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!1.01e-27!14 | |ontology_enrichment_disease=DOID:1749!1.01e-27!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.72e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.60e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.18e-16!3;UBERON:0003729!3.98e-16!5;UBERON:0001004!4.25e-14!72;UBERON:0003343!7.11e-12!4;UBERON:0004785!7.11e-12!4;UBERON:0004119!2.39e-11!169;UBERON:0000925!2.39e-11!169;UBERON:0006595!2.39e-11!169;UBERON:0000344!4.50e-10!12;UBERON:0000161!4.63e-10!35;UBERON:0000365!1.45e-09!5;UBERON:0000065!5.13e-09!53;UBERON:0007196!1.05e-08!14;UBERON:0001558!1.05e-08!14;UBERON:0000166!3.28e-08!21;UBERON:0005910!4.82e-08!6;UBERON:0000165!5.63e-08!28;UBERON:0000930!5.63e-08!28;UBERON:0004815!7.90e-08!3;UBERON:0002031!7.90e-08!3;UBERON:0003102!3.33e-07!95;UBERON:0003126!8.59e-07!7;UBERON:0001005!8.59e-07!7 | |ontology_enrichment_uberon=UBERON:0001949!2.18e-16!3;UBERON:0003729!3.98e-16!5;UBERON:0001004!4.25e-14!72;UBERON:0003343!7.11e-12!4;UBERON:0004785!7.11e-12!4;UBERON:0004119!2.39e-11!169;UBERON:0000925!2.39e-11!169;UBERON:0006595!2.39e-11!169;UBERON:0000344!4.50e-10!12;UBERON:0000161!4.63e-10!35;UBERON:0000365!1.45e-09!5;UBERON:0000065!5.13e-09!53;UBERON:0007196!1.05e-08!14;UBERON:0001558!1.05e-08!14;UBERON:0000166!3.28e-08!21;UBERON:0005910!4.82e-08!6;UBERON:0000165!5.63e-08!28;UBERON:0000930!5.63e-08!28;UBERON:0004815!7.90e-08!3;UBERON:0002031!7.90e-08!3;UBERON:0003102!3.33e-07!95;UBERON:0003126!8.59e-07!7;UBERON:0001005!8.59e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.67e-30;3!UBERON:0000486;3.53e-17;12!UBERON:0003729;6.48e-16;13!UBERON:0003929;1.31e-13;7!UBERON:0006955;1.48e-12;2!UBERON:0004801;1.48e-12;2!UBERON:0006562;2.74e-12;2!UBERON:0003350;4.94e-12;8!UBERON:0001828;4.94e-12;8!UBERON:0000161;4.14e-11;19!UBERON:0000166;4.14e-11;19!UBERON:0000344;1.38e-10;20!UBERON:0000165;9.77e-08;28!UBERON:0001911;8.85e-07;4!UBERON:0003343;8.85e-07;4!UBERON:0001708;8.85e-07;4!UBERON:0004785;8.85e-07;4!UBERON:0008895;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.10e-30,3;UBERON:0003729,6.32e-16,13;UBERON:0006955,1.48e-12,2;UBERON:0004801,1.48e-12,2;UBERON:0003350,5.22e-12,8;UBERON:0001828,5.22e-12,8;UBERON:0000344,1.36e-10,20;UBERON:0000166,1.09e-09,22;UBERON:0000165,1.71e-07,29;UBERON:0000930,1.71e-07,29;UBERON:0003343,8.14e-07,4;UBERON:0004785,8.14e-07,4;UBERON:0001708,8.61e-07,4;UBERON:0008895,8.61e-07,4 | |||
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|short_description=p9@APCDD1L | |short_description=p9@APCDD1L | ||
}} | }} |
Latest revision as of 05:23, 17 September 2015
Short description: | p9@APCDD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_APCDD1L_5end |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | 74bp_to_ENST00000491015_5end |
EntrezGene: | APCDD1L |
HGNC: | 26892 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.10e-30 | 3 |
epithelial cell of alimentary canal | 5.55e-18 | 20 |
endo-epithelial cell | 2.63e-13 | 42 |
epithelial cell of cervix | 1.48e-12 | 2 |
endodermal cell | 1.10e-09 | 58 |
duct epithelial cell | 9.66e-09 | 3 |
branched duct epithelial cell | 9.66e-09 | 3 |
tracheal epithelial cell | 9.66e-09 | 3 |
tracheoblast | 9.66e-09 | 3 |
epithelial cell of Malassez | 1.21e-08 | 3 |
transitional epithelial cell | 7.70e-07 | 4 |
urothelial cell | 7.70e-07 | 4 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.10e-30 | 3 |
mouth mucosa | 6.32e-16 | 13 |
uterine epithelium | 1.48e-12 | 2 |
cervix epithelium | 1.48e-12 | 2 |
epithelium of mucosa | 5.22e-12 | 8 |
gingiva | 5.22e-12 | 8 |
mucosa | 1.36e-10 | 20 |
oral opening | 1.09e-09 | 22 |
mouth | 1.71e-07 | 29 |
stomodeum | 1.71e-07 | 29 |
mucosa of oral region | 8.14e-07 | 4 |
respiratory system mucosa | 8.14e-07 | 4 |
jaw skeleton | 8.61e-07 | 4 |
splanchnocranium | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.60e-07 | 14 |