FFCP PHASE1:Hg19::chr7:150783576..150783596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116988 | |EntrezGene=116988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16923 | |HGNC=16923 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETI2,E9PAL8,Q96P47,Q86XV5 | |UniProt=E7ETI2,E9PAL8,Q96P47,Q86XV5 | ||
|association_with_transcript=-229bp_to_ENST00000397232,NM_001042535,NM_031946,uc003wjf.1,uc003wjg.1,uc010lpy.1_5end | |association_with_transcript=-229bp_to_ENST00000397232,NM_001042535,NM_031946,uc003wjf.1,uc003wjg.1,uc010lpy.1_5end | ||
|cluster_id=chr7:150783576..150783596,+ | |||
|coexpression_cluster_id=C4665 | |||
|description=CAGE_peak_3_at_AGAP3_5end | |description=CAGE_peak_3_at_AGAP3_5end | ||
|id=chr7:150783576..150783596,+ | |id=chr7:150783576..150783596,+ | ||
|ontology_enrichment_celltype=CL:0002009!3.48e-15!65;CL:0002194!3.79e-14!63;CL:0000576!3.79e-14!63;CL:0000040!3.79e-14!63;CL:0000559!3.79e-14!63;CL:0000557!1.19e-13!71;CL:0000115!2.80e-13!35;CL:0000860!1.59e-12!45;CL:0002057!1.75e-12!42;CL:0000839!6.38e-12!70;CL:0000766!1.01e-11!76;CL:0002078!2.84e-11!44;CL:0002139!3.11e-09!24;CL:0000213!6.56e-09!57;CL:0000215!6.56e-09!57;CL:0000071!2.65e-08!18;CL:0002546!2.65e-08!18;CL:0000222!9.14e-07!119 | |ontology_enrichment_celltype=CL:0002009!3.48e-15!65;CL:0002194!3.79e-14!63;CL:0000576!3.79e-14!63;CL:0000040!3.79e-14!63;CL:0000559!3.79e-14!63;CL:0000557!1.19e-13!71;CL:0000115!2.80e-13!35;CL:0000860!1.59e-12!45;CL:0002057!1.75e-12!42;CL:0000839!6.38e-12!70;CL:0000766!1.01e-11!76;CL:0002078!2.84e-11!44;CL:0002139!3.11e-09!24;CL:0000213!6.56e-09!57;CL:0000215!6.56e-09!57;CL:0000071!2.65e-08!18;CL:0002546!2.65e-08!18;CL:0000222!9.14e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.63e-16;39!CL:0000234;3.63e-16;39!CL:0000860;3.82e-16;33!CL:0002057;3.82e-16;33!CL:0000115;9.52e-12;36!CL:0002139;2.27e-09;24!CL:0002078;1.18e-08;45!CL:0000071;2.24e-08;18!CL:0000576;2.47e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.87e-15,48;CL:0000234,1.87e-15,48;CL:0002009,2.34e-15,61;CL:0002194,2.71e-14,59;CL:0000576,2.71e-14,59;CL:0000040,2.71e-14,59;CL:0000559,2.71e-14,59;CL:0000557,6.23e-14,67;CL:0000115,9.12e-14,36;CL:0000860,1.58e-12,42;CL:0002057,1.58e-12,42;CL:0000839,3.10e-12,66;CL:0000766,6.71e-12,72;CL:0002078,1.42e-11,45;CL:0002139,2.68e-09,24;CL:0000213,3.95e-09,58;CL:0000215,3.95e-09,58;CL:0000071,2.32e-08,18;CL:0002546,2.32e-08,18;CL:0000222,9.96e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;5.57e-10;42!CL:0002546;2.24e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.74e-22!57;UBERON:0005068!6.74e-22!57;UBERON:0006241!6.74e-22!57;UBERON:0007135!6.74e-22!57;UBERON:0005743!1.25e-20!86;UBERON:0000073!9.47e-20!94;UBERON:0001016!9.47e-20!94;UBERON:0001017!4.08e-19!82;UBERON:0002616!8.00e-19!59;UBERON:0002050!6.09e-18!605;UBERON:0005423!6.09e-18!605;UBERON:0000923!7.33e-18!604;UBERON:0005291!7.33e-18!604;UBERON:0006598!7.33e-18!604;UBERON:0002532!7.33e-18!604;UBERON:0000468!8.71e-18!659;UBERON:0003080!1.16e-17!42;UBERON:0000955!1.68e-17!69;UBERON:0006238!1.68e-17!69;UBERON:0002780!1.91e-17!41;UBERON:0001890!1.91e-17!41;UBERON:0006240!1.91e-17!41;UBERON:0002346!1.93e-17!90;UBERON:0003075!2.04e-17!86;UBERON:0007284!2.04e-17!86;UBERON:0000467!2.71e-17!625;UBERON:0000025!3.71e-17!194;UBERON:0000922!4.83e-17!612;UBERON:0000480!5.16e-17!626;UBERON:0003056!2.79e-16!61;UBERON:0001893!1.21e-14!34;UBERON:0002020!1.61e-14!34;UBERON:0003528!1.61e-14!34;UBERON:0002791!4.73e-14!33;UBERON:0001869!1.13e-13!32;UBERON:0004111!9.32e-13!241;UBERON:0000119!2.37e-12!312;UBERON:0000483!3.82e-12!309;UBERON:0002619!8.13e-12!22;UBERON:0002371!1.37e-11!80;UBERON:0001950!1.13e-10!20;UBERON:0003081!1.20e-10!216;UBERON:0000062!1.39e-10!511;UBERON:0000477!1.63e-10!286;UBERON:0000033!2.48e-10!123;UBERON:0001474!2.63e-10!86;UBERON:0000956!3.68e-10!25;UBERON:0000203!3.68e-10!25;UBERON:0000924!4.23e-10!173;UBERON:0006601!4.23e-10!173;UBERON:0004121!6.92e-10!169;UBERON:0002405!2.75e-09!115;UBERON:0004765!9.97e-09!101;UBERON:0001434!9.97e-09!101;UBERON:0000153!1.44e-08!129;UBERON:0007811!1.44e-08!129;UBERON:0001986!2.65e-08!18;UBERON:0004638!2.65e-08!18;UBERON:0004852!2.65e-08!18;UBERON:0007023!2.87e-08!115;UBERON:0002204!4.25e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.88e-13;41!UBERON:0001890;4.88e-13;41!UBERON:0001893;7.27e-13;34!UBERON:0003528;9.32e-13;34!UBERON:0002020;9.32e-13;34!UBERON:0001869;1.48e-12;32!UBERON:0002791;1.68e-12;32!UBERON:0000073;2.64e-12;53!UBERON:0002616;2.64e-12;53!UBERON:0002619;2.75e-12;22!UBERON:0001950;4.18e-11;20!UBERON:0000956;2.23e-10;25!UBERON:0000203;2.23e-10;25!UBERON:0000955;5.78e-09;68!UBERON:0001017;2.05e-08;75!UBERON:0004638;2.24e-08;18!UBERON:0001986;2.24e-08;18!UBERON:0004852;2.24e-08;18!UBERON:0001016;7.71e-07;83 | |||
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| ||
|short_description=p3@AGAP3 | |short_description=p3@AGAP3 | ||
}} | }} |
Latest revision as of 05:39, 17 September 2015
Short description: | p3@AGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGAP3_5end |
Coexpression cluster: | C4665_CD14_amygdala_brain_temporal_medial_occipital_hippocampus |
Association with transcript: | -229bp_to_ENST00000397232, NM_001042535, NM_031946, uc003wjf.1, uc003wjg.1, uc010lpy.1_5end |
EntrezGene: | AGAP3 |
HGNC: | 16923 |
UniProt: | E7ETI2E9PAL8Q96P47Q86XV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.87e-15 | 48 |
phagocyte | 1.87e-15 | 48 |
macrophage dendritic cell progenitor | 2.34e-15 | 61 |
monopoietic cell | 2.71e-14 | 59 |
monocyte | 2.71e-14 | 59 |
monoblast | 2.71e-14 | 59 |
promonocyte | 2.71e-14 | 59 |
granulocyte monocyte progenitor cell | 6.23e-14 | 67 |
endothelial cell | 9.12e-14 | 36 |
classical monocyte | 1.58e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-12 | 42 |
myeloid lineage restricted progenitor cell | 3.10e-12 | 66 |
myeloid leukocyte | 6.71e-12 | 72 |
meso-epithelial cell | 1.42e-11 | 45 |
endothelial cell of vascular tree | 2.68e-09 | 24 |
lining cell | 3.95e-09 | 58 |
barrier cell | 3.95e-09 | 58 |
blood vessel endothelial cell | 2.32e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.32e-08 | 18 |
mesodermal cell | 9.96e-07 | 121 |