FFCP PHASE1:Hg19::chr7:150786504..150786517,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr7:150786504..150786517,+ to FFCP PHASE1:Hg19::chr7:150786504..150786517,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116988 | |EntrezGene=116988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16923 | |HGNC=16923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-281bp_to_ENST00000476375_5end | |||
|cluster_id=chr7:150786504..150786517,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_17_at_AGAP3_5end | |||
|id=chr7:150786504..150786517,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.70e-88!42;CL:0000860!2.55e-81!45;CL:0002009!2.76e-59!65;CL:0002194!7.84e-58!63;CL:0000576!7.84e-58!63;CL:0000040!7.84e-58!63;CL:0000559!7.84e-58!63;CL:0000766!1.42e-55!76;CL:0000557!1.51e-53!71;CL:0000839!3.32e-51!70;CL:0000763!7.43e-37!112;CL:0000049!7.43e-37!112;CL:0000738!2.05e-36!140;CL:0002087!7.33e-36!119;CL:0002031!2.42e-30!124;CL:0000037!1.15e-27!172;CL:0000566!1.15e-27!172;CL:0000988!1.46e-25!182;CL:0002032!1.01e-24!165;CL:0000837!1.01e-24!165;CL:0000134!2.49e-11!358;CL:0002320!6.75e-11!365;CL:0000767!1.73e-10!3;CL:0000219!4.86e-10!390;CL:0000842!5.91e-10!3;CL:0000048!8.40e-09!430;CL:0000723!1.60e-08!436;CL:0000034!3.67e-08!444;CL:0000224!1.42e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-100;33!CL:0002057;1.08e-100;33!CL:0000473;1.57e-68;39!CL:0000234;1.57e-68;39!CL:0000576;1.67e-56;48!CL:0000766;6.86e-35;69!CL:0002087;2.54e-17;104!CL:0000763;2.50e-15;100!CL:0002393;8.93e-12;6!CL:0002397;8.93e-12;6!CL:0000738;8.66e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-110,42;CL:0002057,1.48e-110,42;CL:0000473,2.73e-96,48;CL:0000234,2.73e-96,48;CL:0002194,2.61e-76,59;CL:0000576,2.61e-76,59;CL:0000040,2.61e-76,59;CL:0000559,2.61e-76,59;CL:0002009,9.90e-74,61;CL:0000839,5.90e-68,66;CL:0000766,2.81e-67,72;CL:0000557,6.67e-67,67;CL:0000763,7.99e-44,108;CL:0000049,7.99e-44,108;CL:0002087,1.14e-37,115;CL:0002031,5.92e-36,120;CL:0000738,4.36e-34,136;CL:0002032,3.15e-28,161;CL:0000837,3.15e-28,161;CL:0000037,6.74e-27,168;CL:0000988,2.44e-25,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0002393,4.78e-08,9;CL:0002397,4.78e-08,9;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.41e-78;42!CL:0000049;1.37e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.56e-46!80;UBERON:0001474!1.15e-42!86;UBERON:0002390!3.30e-41!102;UBERON:0003061!3.30e-41!102;UBERON:0002193!7.39e-39!112;UBERON:0004765!5.41e-35!101;UBERON:0001434!5.41e-35!101;UBERON:0002405!1.44e-31!115;UBERON:0002204!8.54e-19!167;UBERON:0003081!1.07e-18!216;UBERON:0002384!5.12e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-58,76;UBERON:0001474,3.83e-54,82;UBERON:0004765,4.69e-49,90;UBERON:0002405,2.27e-47,93;UBERON:0002390,8.68e-45,98;UBERON:0003061,8.68e-45,98;UBERON:0001434,7.95e-44,100;UBERON:0002193,2.48e-40,108;UBERON:0002204,8.22e-25,167;UBERON:0003081,9.82e-20,203;UBERON:0000926,2.71e-11,315;UBERON:0004120,2.71e-11,315;UBERON:0006603,2.71e-11,315;UBERON:0002384,5.43e-10,371 | |||
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| ||
|short_description=p17@AGAP3 | |||
}} | }} |
Latest revision as of 05:47, 17 September 2015
Short description: | p17@AGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_AGAP3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -281bp_to_ENST00000476375_5end |
EntrezGene: | AGAP3 |
HGNC: | 16923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.48e-110 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.48e-110 | 42 |
defensive cell | 2.73e-96 | 48 |
phagocyte | 2.73e-96 | 48 |
monopoietic cell | 2.61e-76 | 59 |
monocyte | 2.61e-76 | 59 |
monoblast | 2.61e-76 | 59 |
promonocyte | 2.61e-76 | 59 |
macrophage dendritic cell progenitor | 9.90e-74 | 61 |
myeloid lineage restricted progenitor cell | 5.90e-68 | 66 |
myeloid leukocyte | 2.81e-67 | 72 |
granulocyte monocyte progenitor cell | 6.67e-67 | 67 |
myeloid cell | 7.99e-44 | 108 |
common myeloid progenitor | 7.99e-44 | 108 |
nongranular leukocyte | 1.14e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 5.92e-36 | 120 |
leukocyte | 4.36e-34 | 136 |
hematopoietic oligopotent progenitor cell | 3.15e-28 | 161 |
hematopoietic multipotent progenitor cell | 3.15e-28 | 161 |
hematopoietic stem cell | 6.74e-27 | 168 |
hematopoietic cell | 2.44e-25 | 177 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
motile cell | 2.28e-09 | 386 |
multi fate stem cell | 4.01e-08 | 427 |
intermediate monocyte | 4.78e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.78e-08 | 9 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-58 | 76 |
bone element | 3.83e-54 | 82 |
skeletal element | 4.69e-49 | 90 |
immune system | 2.27e-47 | 93 |
hematopoietic system | 8.68e-45 | 98 |
blood island | 8.68e-45 | 98 |
skeletal system | 7.95e-44 | 100 |
hemolymphoid system | 2.48e-40 | 108 |
musculoskeletal system | 8.22e-25 | 167 |
lateral plate mesoderm | 9.82e-20 | 203 |
mesoderm | 2.71e-11 | 315 |
mesoderm-derived structure | 2.71e-11 | 315 |
presumptive mesoderm | 2.71e-11 | 315 |
connective tissue | 5.43e-10 | 371 |