FFCP PHASE1:Hg19::chr1:153538292..153538342,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:153538292..153538342,- to FFCP PHASE1:Hg19::chr1:153538292..153538342,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6273 | |EntrezGene=6273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10492 | |HGNC=10492 | ||
|TSSclassifier=strong | |||
|UniProt=P29034 | |UniProt=P29034 | ||
|association_with_transcript=0bp_to_ENST00000368708,ENST00000497140,NM_005978,uc001fcb.2_5end | |||
|cluster_id=chr1:153538292..153538342,- | |||
|coexpression_cluster_id=C3871 | |||
|description=CAGE_peak_3_at_S100A2_5end | |||
|id=chr1:153538292..153538342,- | |||
|ontology_enrichment_celltype=CL:0000066!6.87e-23!254;CL:0000548!2.63e-22!679;CL:0000004!2.63e-22!679;CL:0000255!2.63e-22!679;CL:0000012!1.57e-21!682;CL:0000063!4.70e-16!578;CL:0002076!8.27e-14!43;CL:0000003!1.63e-12!722;CL:0000860!3.59e-12!45;CL:0002057!7.39e-12!42;CL:0002371!1.79e-11!591;CL:0000144!2.71e-11!625;CL:0000223!8.83e-10!59;CL:0002368!4.06e-09!13;CL:0000220!4.68e-09!246;CL:0002321!1.19e-08!248;CL:0000076!4.37e-07!62;CL:0002202!5.97e-07!9;CL:0002632!5.97e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.20e-21;33!CL:0002057;2.20e-21;33!CL:0000473;1.13e-13;39!CL:0000234;1.13e-13;39!CL:0002076;1.72e-12;42!CL:0002368;3.08e-12;13!CL:0000576;1.85e-09;48!CL:0002202;2.29e-09;9!CL:0002632;2.29e-09;9!CL:1000449;1.22e-07;15!CL:1000497;2.60e-07;17!CL:0002518;2.60e-07;17!CL:1000507;3.28e-07;10!CL:1000494;3.28e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-20,253;CL:0000860,2.47e-17,42;CL:0002057,2.47e-17,42;CL:0002076,3.30e-17,42;CL:0000473,1.09e-13,48;CL:0000234,1.09e-13,48;CL:0002368,1.56e-12,13;CL:0000223,1.23e-11,58;CL:0002009,1.50e-09,61;CL:0002194,1.60e-09,59;CL:0000576,1.60e-09,59;CL:0000040,1.60e-09,59;CL:0000559,1.60e-09,59;CL:0002202,2.14e-09,9;CL:0002632,2.14e-09,9;CL:1000449,4.62e-08,15;CL:1000507,7.49e-08,10;CL:1000494,7.49e-08,10;CL:0000557,8.55e-08,67;CL:1000497,8.65e-08,17;CL:0002518,8.65e-08,17;CL:0000839,1.78e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-13;42!CL:0000223;3.80e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.09e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.40e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.01e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.32e-09!448;UBERON:0004120!1.32e-09!448;UBERON:0006603!1.32e-09!448;UBERON:0000467!2.13e-08!625;UBERON:0000480!3.09e-08!626;UBERON:0000923!8.23e-08!604;UBERON:0005291!8.23e-08!604;UBERON:0006598!8.23e-08!604;UBERON:0002532!8.23e-08!604;UBERON:0002050!1.17e-07!605;UBERON:0005423!1.17e-07!605;UBERON:0000062!2.54e-07!511;UBERON:0000468!3.63e-07!659;UBERON:0000922!4.46e-07!612;UBERON:0001008!6.23e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.02e-07;30!UBERON:0001008;1.02e-07;30!UBERON:0006555;1.22e-07;15!UBERON:0004819;1.22e-07;15!UBERON:0001285;1.22e-07;15!UBERON:0007684;1.22e-07;15!UBERON:0004211;3.28e-07;10!UBERON:0009773;3.28e-07;10!UBERON:0001231;3.28e-07;10!UBERON:0004810;3.28e-07;10!UBERON:0005910;8.19e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,5.77e-10,90;UBERON:0001434,1.32e-08,100;UBERON:0002371,1.72e-08,76;UBERON:0001008,2.31e-08,48;UBERON:0001474,3.14e-08,82;UBERON:0004211,4.62e-08,15;UBERON:0009773,4.62e-08,15;UBERON:0001231,4.62e-08,15;UBERON:0001285,4.62e-08,15;UBERON:0007684,4.62e-08,15;UBERON:0004208,4.62e-08,15;UBERON:0006554,4.66e-08,47;UBERON:0004810,7.49e-08,10;UBERON:0006555,2.55e-07,16;UBERON:0004819,2.55e-07,16;UBERON:0005910,8.14e-07,6 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.261185628199839,1.47440361900905,15.3516256953934,1.52908960491121,2.90143676051299,1.8564952944007,2.31978163009541,0,0,0,0.487932798790507,0,0.408001382488506,0.626909442956176,0,1.36874425072884,0.627713197974014,0.0764134057479513,0,0,1.18009283054671,0.383829398097213,0.464448369948228,5.51652734687356,4.51808878167375,11.4623743151704,0,0.142169232487422,0,0.553995408531877,0.601633342410425,2.17010870715852,0,0,0,3.34415949192999,2.64513160582167,3.15359279544161,3.48643555358527,8.63452564845834,4.64559556342655,5.17846306179871,10.5025889676931,8.74984250587765,4.82643953031266,1.93645405075148,6.77132432971709,5.83551252582075,5.73102915121476,5.39336362668203,5.20342617030534,2.88836124368484,3.19668562899521,5.27762080298746,6.78176435913548,5.11469700639233,7.54544020434318,4.53908179752912,1.86846674698672,14.0699252543776,10.9511412868242,8.90474263290978,2.42159801053347,3.68277635987565,4.1140110367315,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.01392563272577,0,1.94653948121054,1.51255707462509,1.55210578223795,0.614843499851882,0,8.01449634243593,6.67411997011973,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0.56530794192401,0.419499436209906,0,0.626984899610432,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0.549605231791222,0,0,8.28578699070815,0.496971951695318,1.01304409331664,0.264818361626438,0,0,1.68203280042692,0,2.96001058100592,0.311211035399766,0,0.163461903113459,0,0,0.468642863667593,0.312160076830321,1.1409436430889,0.597794722207204,0.939475989150119,1.45685649931318,1.40450806702248,0.204154171254893,1.47401180774122,0.206651562351531,0,0.494533858557114,0,0,1.34668891163253,1.37630371859161,0,0.877955241761676,0,0.300476117813194,0.680593098960126,0.717558542755448,0.213557388818567,1.05965950579781,0.600182192168805,0.103052529238439,0.257640540045629,0.930584281657949,0.337552664482532,0,0.252433774244115,1.38074847963449,0,0,1.0075209822764,1.3564847384839,5.7978255948989,4.09119180886252,2.58124135850103,0,0,0,0,0,0,0,0,2.76269842704961,0.464367928031979,0.721879481669586,1.41968160047813,0.168584690078102,0.241011029883482,0.882351781859152,1.30727666455444,0.949082476444386,1.8876383142423,0.588664395376038,1.53898862778556,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0.686271241194102,2.52425656439839,8.99214026060957,2.71428225511403,5.37012981919472,0.977424915930974,0,1.44331342025273,1.85488647960123,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0,5.62403003920662,2.85569617938061,0.567100388969546,5.64218693027944,1.74380363108377,6.51750554580859,0,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.4400297149257,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,2.83698264046557,1.5985330740966,0.142977993658148,0,0,0.325736184293735,0,0,2.41151501647669,3.48613383440118,1.19967589418468,0,0,0,2.15662369942424,2.29723871668228,1.42636905040718,0.434343920002738,0.61642896765115,1.43248770591916,0,0.197030760201927,0.215627574859517,0,0.508189248444927,1.30139853857622,0,0.502548796003046,0,0,0,0,0.613457458595699,1.00034104211935,1.62759014219841,0.207970861530807,1.07057393278297,0.630809660135739,0.702848489956279,0.601892199455438,0,1.03473071292505,0,1.29058417979192,0.347534457872331,0.195801157462741,0.686286847621712,0,0.215714200818617,0,7.27506171471023,4.99306318531491,2.41912234663744,0.248107807818777,0.153461973288062,0.561320188866147,0.384417447767103,1.53512174720011,0.482561763430822,2.96836132889982,0.154209693802656,0.532685175939381,0.164254312027618,0.519254429183621,0.464841513839837,0,4.61164881697555,12.9834194399614,0.34444334449382,0.728364672026868,0.524497659837696,2.70719767744447,1.92538342761037,4.70609861506113,7.30696123266303,1.68882606228601,0,0.510281115829547,1.0795795805107,4.62681758070868,2.70946437543853,1.50506932156456,1.78413391131527,1.66215201785745,4.47749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.309123034943167,1.37354197227515,0.907604499126468,1.72279661398852,1.30012049207304,0,0.870036464629098,0.462145851343933,0,0.689182862422653,0.214840489736547,0.290033387828457,0.170453254832202,0.356128142586949,5.95025695299521,2.69066094311149,1.91419068741876,10.4192514281216,0.464845549297286,0.31481234683064,0,0,0.532306030317022,1.73986598415015,1.11194531462352,1.00187420719394,0,0.316379424718726,0,0.255897791311334,0,1.59101623962968,0.78494864019923,0.179872457583315,0,0.471249609382746,1.01091240786658,0,1.68503382495592,0,0.487426979262569,1.05650146756755,0.272999822815972,0.565621727814851,0,1.10273068709225,1.32687795048244,1.31535265576129,0,0,1.01455188481352,3.717881977197,2.53526042279017,0.14341135220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| ||
|short_description=p3@S100A2 | |||
}} | }} |
Latest revision as of 06:10, 17 September 2015
Short description: | p3@S100A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_S100A2_5end |
Coexpression cluster: | C3871_nasal_CD14_Alveolar_squamous_Prostate_Tracheal_large |
Association with transcript: | 0bp_to_ENST00000368708, ENST00000497140, NM_005978, uc001fcb.2_5end |
EntrezGene: | S100A2 |
HGNC: | 10492 |
UniProt: | P29034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.26e-20 | 253 |
classical monocyte | 2.47e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.47e-17 | 42 |
endo-epithelial cell | 3.30e-17 | 42 |
defensive cell | 1.09e-13 | 48 |
phagocyte | 1.09e-13 | 48 |
respiratory epithelial cell | 1.56e-12 | 13 |
endodermal cell | 1.23e-11 | 58 |
macrophage dendritic cell progenitor | 1.50e-09 | 61 |
monopoietic cell | 1.60e-09 | 59 |
monocyte | 1.60e-09 | 59 |
monoblast | 1.60e-09 | 59 |
promonocyte | 1.60e-09 | 59 |
epithelial cell of tracheobronchial tree | 2.14e-09 | 9 |
epithelial cell of lower respiratory tract | 2.14e-09 | 9 |
epithelial cell of nephron | 4.62e-08 | 15 |
kidney tubule cell | 7.49e-08 | 10 |
nephron tubule epithelial cell | 7.49e-08 | 10 |
granulocyte monocyte progenitor cell | 8.55e-08 | 67 |
kidney cell | 8.65e-08 | 17 |
kidney epithelial cell | 8.65e-08 | 17 |
myeloid lineage restricted progenitor cell | 1.78e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 5.77e-10 | 90 |
skeletal system | 1.32e-08 | 100 |
bone marrow | 1.72e-08 | 76 |
renal system | 2.31e-08 | 48 |
bone element | 3.14e-08 | 82 |
nephron epithelium | 4.62e-08 | 15 |
renal tubule | 4.62e-08 | 15 |
nephron tubule | 4.62e-08 | 15 |
nephron | 4.62e-08 | 15 |
uriniferous tubule | 4.62e-08 | 15 |
nephrogenic mesenchyme | 4.62e-08 | 15 |
urinary system structure | 4.66e-08 | 47 |
nephron tubule epithelium | 7.49e-08 | 10 |
excretory tube | 2.55e-07 | 16 |
kidney epithelium | 2.55e-07 | 16 |
transitional epithelium | 8.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.01e-09 | 14 |