FFCP PHASE2:Hg19::chr1:27286862..27286885,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:126695 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:26624 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=126695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=26624 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q68D65 | ||
|association_with_transcript=0bp_to_ENST00000374109_5end | |association_with_transcript=0bp_to_ENST00000374109_5end | ||
|cluster_id=chr1:27286862..27286885,- | |cluster_id=chr1:27286862..27286885,- |
Latest revision as of 07:02, 17 September 2015
Short description: | p2@C1orf172 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf172_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000374109_5end |
EntrezGene: | C1orf172 |
HGNC: | 26624 |
UniProt: | Q68D65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@C1orf172 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.14e-30 | 253 |
endo-epithelial cell | 5.31e-25 | 42 |
endodermal cell | 5.91e-19 | 58 |
respiratory epithelial cell | 2.09e-13 | 13 |
epithelial cell of alimentary canal | 1.45e-10 | 20 |
general ecto-epithelial cell | 7.04e-10 | 14 |
epithelial cell of tracheobronchial tree | 9.79e-10 | 9 |
epithelial cell of lower respiratory tract | 9.79e-10 | 9 |
germ line cell | 5.98e-08 | 7 |
germ cell | 5.98e-08 | 7 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
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endoderm-derived structure | 9.09e-24 | 160 |
endoderm | 9.09e-24 | 160 |
presumptive endoderm | 9.09e-24 | 160 |
digestive system | 3.28e-16 | 145 |
digestive tract | 3.28e-16 | 145 |
primitive gut | 3.28e-16 | 145 |
subdivision of digestive tract | 4.14e-14 | 118 |
respiratory system | 1.92e-13 | 74 |
extraembryonic membrane | 1.82e-12 | 14 |
membranous layer | 1.82e-12 | 14 |
Showing 1 to 10 of 41 entries
Ontology term | p-value | n |
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carcinoma | 1.13e-18 | 106 |
squamous cell carcinoma | 3.03e-14 | 14 |
cell type cancer | 1.40e-12 | 143 |
adenocarcinoma | 4.28e-09 | 25 |
Showing 1 to 4 of 4 entries