FFCP PHASE1:Hg19::chr20:57582296..57582325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1522 | |EntrezGene=1522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2547 | |HGNC=2547 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBR2 | |UniProt=Q9UBR2 | ||
|association_with_transcript=0bp_to_ENST00000217131,NM_001336,uc002yai.2,uc002yaj.3_5end | |association_with_transcript=0bp_to_ENST00000217131,NM_001336,uc002yai.2,uc002yaj.3_5end | ||
|cluster_id=chr20:57582296..57582325,- | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_1_at_CTSZ_5end | |description=CAGE_peak_1_at_CTSZ_5end | ||
|id=chr20:57582296..57582325,- | |id=chr20:57582296..57582325,- | ||
|ontology_enrichment_celltype=CL:0002009!1.93e-32!65;CL:0002194!2.26e-31!63;CL:0000576!2.26e-31!63;CL:0000040!2.26e-31!63;CL:0000559!2.26e-31!63;CL:0000557!2.02e-27!71;CL:0000766!4.47e-26!76;CL:0000839!1.66e-25!70;CL:0002057!2.44e-24!42;CL:0000860!1.72e-22!45;CL:0000763!1.31e-13!112;CL:0000049!1.31e-13!112;CL:0000063!3.58e-12!578;CL:0002371!7.13e-12!591;CL:0000144!9.34e-10!625;CL:0000115!2.21e-09!35;CL:0002078!1.02e-08!44;CL:0000213!2.99e-08!57;CL:0000215!2.99e-08!57;CL:0000548!3.49e-08!679;CL:0000004!3.49e-08!679;CL:0000255!3.49e-08!679;CL:0000738!5.30e-08!140;CL:0000012!8.75e-08!682;CL:0000451!1.05e-07!10;CL:0000134!1.39e-07!358;CL:0002139!1.51e-07!24;CL:0002320!3.42e-07!365;CL:0002087!3.74e-07!119;CL:0000990!7.01e-07!8 | |ontology_enrichment_celltype=CL:0002009!1.93e-32!65;CL:0002194!2.26e-31!63;CL:0000576!2.26e-31!63;CL:0000040!2.26e-31!63;CL:0000559!2.26e-31!63;CL:0000557!2.02e-27!71;CL:0000766!4.47e-26!76;CL:0000839!1.66e-25!70;CL:0002057!2.44e-24!42;CL:0000860!1.72e-22!45;CL:0000763!1.31e-13!112;CL:0000049!1.31e-13!112;CL:0000063!3.58e-12!578;CL:0002371!7.13e-12!591;CL:0000144!9.34e-10!625;CL:0000115!2.21e-09!35;CL:0002078!1.02e-08!44;CL:0000213!2.99e-08!57;CL:0000215!2.99e-08!57;CL:0000548!3.49e-08!679;CL:0000004!3.49e-08!679;CL:0000255!3.49e-08!679;CL:0000738!5.30e-08!140;CL:0000012!8.75e-08!682;CL:0000451!1.05e-07!10;CL:0000134!1.39e-07!358;CL:0002139!1.51e-07!24;CL:0002320!3.42e-07!365;CL:0002087!3.74e-07!119;CL:0000990!7.01e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.24e-18;39!CL:0000234;1.24e-18;39!CL:0000860;5.08e-18;33!CL:0002057;5.08e-18;33!CL:0000576;2.44e-17;48!CL:0000766;3.23e-12;69!CL:0000115;4.48e-08;36!CL:0000451;1.05e-07;10!CL:0002139;1.49e-07;24!CL:0000990;7.09e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.15e-34,61;CL:0002194,6.04e-33,59;CL:0000576,6.04e-33,59;CL:0000040,6.04e-33,59;CL:0000559,6.04e-33,59;CL:0000557,1.40e-28,67;CL:0000473,1.62e-28,48;CL:0000234,1.62e-28,48;CL:0000766,4.42e-27,72;CL:0000839,1.36e-26,66;CL:0000860,2.42e-24,42;CL:0002057,2.42e-24,42;CL:0000763,6.55e-14,108;CL:0000049,6.55e-14,108;CL:0000115,2.29e-09,36;CL:0002078,9.60e-09,45;CL:0000213,2.71e-08,58;CL:0000215,2.71e-08,58;CL:0000738,4.79e-08,136;CL:0000451,1.05e-07,10;CL:0000134,1.12e-07,354;CL:0002139,1.51e-07,24;CL:0002320,2.79e-07,361;CL:0002087,3.35e-07,115;CL:0000990,7.00e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.68e-26!216;UBERON:0002371!8.35e-26!80;UBERON:0002193!2.41e-24!112;UBERON:0002390!1.13e-22!102;UBERON:0003061!1.13e-22!102;UBERON:0002405!2.25e-22!115;UBERON:0001474!1.78e-20!86;UBERON:0004765!4.92e-19!101;UBERON:0001434!4.92e-19!101;UBERON:0000926!2.83e-17!448;UBERON:0004120!2.83e-17!448;UBERON:0006603!2.83e-17!448;UBERON:0002204!4.04e-15!167;UBERON:0000480!1.47e-12!626;UBERON:0000467!2.92e-12!625;UBERON:0000468!2.86e-09!659;UBERON:0002384!5.72e-07!375 | |ontology_enrichment_uberon=UBERON:0003081!1.68e-26!216;UBERON:0002371!8.35e-26!80;UBERON:0002193!2.41e-24!112;UBERON:0002390!1.13e-22!102;UBERON:0003061!1.13e-22!102;UBERON:0002405!2.25e-22!115;UBERON:0001474!1.78e-20!86;UBERON:0004765!4.92e-19!101;UBERON:0001434!4.92e-19!101;UBERON:0000926!2.83e-17!448;UBERON:0004120!2.83e-17!448;UBERON:0006603!2.83e-17!448;UBERON:0002204!4.04e-15!167;UBERON:0000480!1.47e-12!626;UBERON:0000467!2.92e-12!625;UBERON:0000468!2.86e-09!659;UBERON:0002384!5.72e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.83e-27,76;UBERON:0003081,1.64e-26,203;UBERON:0002405,6.02e-25,93;UBERON:0002193,7.78e-25,108;UBERON:0002390,3.46e-23,98;UBERON:0003061,3.46e-23,98;UBERON:0001474,3.75e-21,82;UBERON:0004765,6.69e-19,90;UBERON:0000926,9.27e-19,315;UBERON:0004120,9.27e-19,315;UBERON:0006603,9.27e-19,315;UBERON:0001434,2.70e-18,100;UBERON:0002204,1.81e-14,167;UBERON:0002050,3.13e-07,564;UBERON:0000923,3.47e-07,560;UBERON:0010316,3.47e-07,560;UBERON:0005291,3.47e-07,560;UBERON:0006598,3.47e-07,560;UBERON:0010317,3.47e-07,560;UBERON:0002532,3.47e-07,560;UBERON:0002384,4.64e-07,371 | |||
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| ||
|short_description=p1@CTSZ | |short_description=p1@CTSZ | ||
}} | }} |
Latest revision as of 07:16, 17 September 2015
Short description: | p1@CTSZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTSZ_5end |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | 0bp_to_ENST00000217131, NM_001336, uc002yai.2, uc002yaj.3_5end |
EntrezGene: | CTSZ |
HGNC: | 2547 |
UniProt: | Q9UBR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 5.15e-34 | 61 |
monopoietic cell | 6.04e-33 | 59 |
monocyte | 6.04e-33 | 59 |
monoblast | 6.04e-33 | 59 |
promonocyte | 6.04e-33 | 59 |
granulocyte monocyte progenitor cell | 1.40e-28 | 67 |
defensive cell | 1.62e-28 | 48 |
phagocyte | 1.62e-28 | 48 |
myeloid leukocyte | 4.42e-27 | 72 |
myeloid lineage restricted progenitor cell | 1.36e-26 | 66 |
classical monocyte | 2.42e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-24 | 42 |
myeloid cell | 6.55e-14 | 108 |
common myeloid progenitor | 6.55e-14 | 108 |
endothelial cell | 2.29e-09 | 36 |
meso-epithelial cell | 9.60e-09 | 45 |
lining cell | 2.71e-08 | 58 |
barrier cell | 2.71e-08 | 58 |
leukocyte | 4.79e-08 | 136 |
dendritic cell | 1.05e-07 | 10 |
mesenchymal cell | 1.12e-07 | 354 |
endothelial cell of vascular tree | 1.51e-07 | 24 |
connective tissue cell | 2.79e-07 | 361 |
nongranular leukocyte | 3.35e-07 | 115 |
conventional dendritic cell | 7.00e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.83e-27 | 76 |
lateral plate mesoderm | 1.64e-26 | 203 |
immune system | 6.02e-25 | 93 |
hemolymphoid system | 7.78e-25 | 108 |
hematopoietic system | 3.46e-23 | 98 |
blood island | 3.46e-23 | 98 |
bone element | 3.75e-21 | 82 |
skeletal element | 6.69e-19 | 90 |
mesoderm | 9.27e-19 | 315 |
mesoderm-derived structure | 9.27e-19 | 315 |
presumptive mesoderm | 9.27e-19 | 315 |
skeletal system | 2.70e-18 | 100 |
musculoskeletal system | 1.81e-14 | 167 |
embryonic structure | 3.13e-07 | 564 |
germ layer | 3.47e-07 | 560 |
germ layer / neural crest | 3.47e-07 | 560 |
embryonic tissue | 3.47e-07 | 560 |
presumptive structure | 3.47e-07 | 560 |
germ layer / neural crest derived structure | 3.47e-07 | 560 |
epiblast (generic) | 3.47e-07 | 560 |
connective tissue | 4.64e-07 | 371 |