FFCP PHASE1:Hg19::chr19:34855944..34855962,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:34855944..34855962,+ to FFCP PHASE1:Hg19::chr19:34855944..34855962,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2821 | |EntrezGene=2821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4458 | |HGNC=4458 | ||
|TSSclassifier=strong | |||
|UniProt=P06744 | |UniProt=P06744 | ||
|association_with_transcript=-69bp_to_ENST00000356487,NM_000175_5end | |||
|cluster_id=chr19:34855944..34855962,+ | |||
|description=CAGE_peak_6_at_GPI_5end | |||
|id=chr19:34855944..34855962,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.48e-10!254;CL:1000497!3.13e-08!18;CL:0002518!3.13e-08!18;CL:1000449!4.62e-08!16;CL:1000507!7.55e-07!12;CL:1000494!7.55e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000449;5.41e-12;15!CL:1000497;2.40e-11;17!CL:0002518;2.40e-11;17!CL:1000507;6.55e-10;10!CL:1000494;6.55e-10;10!CL:0002681;4.93e-09;12!CL:0002584;4.93e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.04e-12,15;CL:1000497,5.60e-11,17;CL:0002518,5.60e-11,17;CL:1000507,5.15e-10,10;CL:1000494,5.15e-10,10;CL:0002681,6.98e-09,12;CL:0002584,6.98e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.12e-23!194;UBERON:0004111!1.29e-20!241;UBERON:0000119!2.70e-19!312;UBERON:0000483!3.86e-19!309;UBERON:0000477!1.38e-16!286;UBERON:0000475!9.43e-15!365;UBERON:0000481!5.27e-13!347;UBERON:0005743!7.77e-13!86;UBERON:0009569!1.23e-12!113;UBERON:0001017!6.23e-12!82;UBERON:0000955!2.09e-11!69;UBERON:0006238!2.09e-11!69;UBERON:0003075!2.62e-11!86;UBERON:0007284!2.62e-11!86;UBERON:0001049!3.28e-11!57;UBERON:0005068!3.28e-11!57;UBERON:0006241!3.28e-11!57;UBERON:0007135!3.28e-11!57;UBERON:0003914!6.63e-11!118;UBERON:0005172!7.41e-11!55;UBERON:0005173!7.41e-11!55;UBERON:0000064!1.10e-10!219;UBERON:0000073!3.15e-10!94;UBERON:0001016!3.15e-10!94;UBERON:0002346!5.95e-10!90;UBERON:0002417!6.35e-10!61;UBERON:0000916!6.35e-10!61;UBERON:0003103!7.43e-10!69;UBERON:0005177!2.43e-09!107;UBERON:0002616!6.63e-09!59;UBERON:0000489!7.48e-09!32;UBERON:0002113!9.71e-09!27;UBERON:0003918!9.71e-09!27;UBERON:0005095!9.71e-09!27;UBERON:0007687!9.71e-09!27;UBERON:0003080!1.76e-08!42;UBERON:0002780!1.76e-08!41;UBERON:0001890!1.76e-08!41;UBERON:0006240!1.76e-08!41;UBERON:0004211!4.62e-08!16;UBERON:0001285!4.62e-08!16;UBERON:0007684!4.62e-08!16;UBERON:0003220!4.62e-08!16;UBERON:0004208!4.62e-08!16;UBERON:0006555!6.65e-08!17;UBERON:0005103!6.65e-08!17;UBERON:0000083!6.65e-08!17;UBERON:0009201!6.65e-08!17;UBERON:0004819!6.65e-08!17;UBERON:0006553!6.65e-08!17;UBERON:0003074!6.65e-08!17;UBERON:0003060!6.65e-08!17;UBERON:0002020!1.40e-07!34;UBERON:0003528!1.40e-07!34;UBERON:0001950!1.59e-07!20;UBERON:0003056!1.78e-07!61;UBERON:0001893!1.78e-07!34;UBERON:0002100!2.72e-07!216;UBERON:0001869!2.93e-07!32;UBERON:0002791!5.10e-07!33;UBERON:0004876!6.26e-07!20;UBERON:0002619!7.20e-07!22;UBERON:0009773!7.55e-07!12;UBERON:0001231!7.55e-07!12;UBERON:0004810!7.55e-07!12;UBERON:0000080!7.66e-07!18;UBERON:0002120!7.66e-07!18;UBERON:0004875!7.66e-07!18;UBERON:0005721!7.66e-07!18;UBERON:0005754!7.66e-07!18;UBERON:0007297!7.66e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.89e-12;24!UBERON:0011143;3.89e-12;24!UBERON:0006555;5.41e-12;15!UBERON:0004819;5.41e-12;15!UBERON:0001285;5.41e-12;15!UBERON:0007684;5.41e-12;15!UBERON:0000489;7.09e-11;29!UBERON:0001950;4.68e-10;20!UBERON:0004211;6.55e-10;10!UBERON:0009773;6.55e-10;10!UBERON:0001231;6.55e-10;10!UBERON:0004810;6.55e-10;10!UBERON:0002619;8.95e-10;22!UBERON:0006554;1.58e-09;30!UBERON:0001008;1.58e-09;30!UBERON:0000353;2.68e-09;15!UBERON:0003103;3.15e-09;61!UBERON:0001225;4.93e-09;12!UBERON:0008987;4.93e-09;12!UBERON:0001851;6.17e-09;15!UBERON:0005172;1.05e-08;52!UBERON:0005173;1.05e-08;52!UBERON:0000956;5.85e-08;25!UBERON:0000203;5.85e-08;25!UBERON:0003528;4.39e-07;34!UBERON:0002020;4.39e-07;34!UBERON:0001869;6.30e-07;32!UBERON:0002417;7.58e-07;58!UBERON:0000916;7.58e-07;58 | |||
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|short_description=p6@GPI | |||
}} | }} |
Latest revision as of 08:03, 17 September 2015
Short description: | p6@GPI |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPI_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000356487, NM_000175_5end |
EntrezGene: | GPI |
HGNC: | 4458 |
UniProt: | P06744 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.04e-12 | 15 |
kidney cell | 5.60e-11 | 17 |
kidney epithelial cell | 5.60e-11 | 17 |
kidney tubule cell | 5.15e-10 | 10 |
nephron tubule epithelial cell | 5.15e-10 | 10 |
kidney cortical cell | 6.98e-09 | 12 |
renal cortical epithelial cell | 6.98e-09 | 12 |