FFCP PHASE1:Hg19::chr11:2188016..2188030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7054 | |EntrezGene=7054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11782 | |HGNC=11782 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000461172_5end | |association_with_transcript=-12bp_to_ENST00000461172_5end | ||
|cluster_id=chr11:2188016..2188030,- | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_2_at_TH_5end | |description=CAGE_peak_2_at_TH_5end | ||
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|ontology_enrichment_celltype=CL:0002368!4.24e-09!13;CL:0002202!4.88e-08!9;CL:0002632!4.88e-08!9;CL:0000349!6.17e-08!3;CL:0002577!6.17e-08!3;CL:0002328!3.17e-07!3;CL:0000068!5.98e-07!3;CL:0000069!5.98e-07!3;CL:0000307!5.98e-07!3;CL:0000377!5.98e-07!3 | |ontology_enrichment_celltype=CL:0002368!4.24e-09!13;CL:0002202!4.88e-08!9;CL:0002632!4.88e-08!9;CL:0000349!6.17e-08!3;CL:0002577!6.17e-08!3;CL:0002328!3.17e-07!3;CL:0000068!5.98e-07!3;CL:0000069!5.98e-07!3;CL:0000307!5.98e-07!3;CL:0000377!5.98e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.99e-30;19!CL:0002577;4.02e-23;3!CL:0002536;3.82e-16;2!CL:0000650;4.94e-15;2!CL:1000500;4.94e-15;2!CL:1000618;4.94e-15;2!CL:1001318;4.94e-15;2!CL:0002173;4.94e-15;2!CL:0002537;8.41e-14;5!CL:0002599;1.10e-08;1!CL:0000669;5.82e-08;4!CL:1000507;7.32e-07;10!CL:1000494;7.32e-07;10 | |ontology_enrichment_celltype_v019=CL:0000349;2.99e-30;19!CL:0002577;4.02e-23;3!CL:0002536;3.82e-16;2!CL:0000650;4.94e-15;2!CL:1000500;4.94e-15;2!CL:1000618;4.94e-15;2!CL:1001318;4.94e-15;2!CL:0002173;4.94e-15;2!CL:0002537;8.41e-14;5!CL:0002599;1.10e-08;1!CL:0000669;5.82e-08;4!CL:1000507;7.32e-07;10!CL:1000494;7.32e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.62e-30,19;CL:0002577,3.89e-23,3;CL:0002536,3.83e-16,2;CL:0000650,5.71e-15,2;CL:1000500,5.71e-15,2;CL:1000618,5.71e-15,2;CL:1001318,5.71e-15,2;CL:0002173,5.71e-15,2;CL:0002537,7.24e-14,5;CL:0002599,1.18e-08,1;CL:0000669,6.25e-08,4;CL:1000507,7.63e-07,10;CL:1000494,7.63e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@TH | |short_description=p2@TH | ||
}} | }} |
Latest revision as of 09:06, 17 September 2015
Short description: | p2@TH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TH_5end |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | -12bp_to_ENST00000461172_5end |
EntrezGene: | TH |
HGNC: | 11782 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.62e-30 | 19 |
placental epithelial cell | 3.89e-23 | 3 |
amniotic epithelial cell | 3.83e-16 | 2 |
mesangial cell | 5.71e-15 | 2 |
kidney interstitial cell | 5.71e-15 | 2 |
juxtaglomerular complex cell | 5.71e-15 | 2 |
renal interstitial pericyte | 5.71e-15 | 2 |
extraglomerular mesangial cell | 5.71e-15 | 2 |
amnion mesenchymal stem cell | 7.24e-14 | 5 |
smooth muscle cell of the esophagus | 1.18e-08 | 1 |
pericyte cell | 6.25e-08 | 4 |
kidney tubule cell | 7.63e-07 | 10 |
nephron tubule epithelial cell | 7.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.30e-41 | 14 |
membranous layer | 1.30e-41 | 14 |
amnion | 1.91e-26 | 7 |
extraembryonic structure | 1.05e-23 | 24 |
somatic layer of lateral plate mesoderm | 3.96e-23 | 8 |
placenta | 1.67e-17 | 4 |
allantois | 1.67e-17 | 4 |
chorion | 2.56e-17 | 7 |
abdomen connective tissue | 5.71e-15 | 2 |
abdominal segment connective tissue | 5.71e-15 | 2 |
trunk connective tissue | 5.71e-15 | 2 |
interstitial tissue | 5.71e-15 | 2 |
extraglomerular mesangium | 5.71e-15 | 2 |
kidney interstitium | 5.71e-15 | 2 |
juxtaglomerular apparatus | 5.71e-15 | 2 |
mesangium | 5.71e-15 | 2 |
organ component layer | 1.62e-09 | 66 |
hepatopancreatic ampulla | 1.10e-08 | 1 |
extrahepatic bile duct | 1.10e-08 | 1 |
common bile duct | 1.10e-08 | 1 |
duodenal papilla | 1.10e-08 | 1 |
renal system | 1.86e-08 | 48 |
vagina | 2.46e-08 | 1 |
internal female genitalia | 4.38e-08 | 22 |
stroma | 6.25e-08 | 4 |
endoderm-derived structure | 3.69e-07 | 160 |
endoderm | 3.69e-07 | 160 |
presumptive endoderm | 3.69e-07 | 160 |
internal genitalia | 4.36e-07 | 25 |
nephron tubule epithelium | 7.63e-07 | 10 |