FFCP PHASE1:Hg19::chr1:154580584..154580602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=103 | |EntrezGene=103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=225 | |HGNC=225 | ||
|TSSclassifier=strong | |||
|UniProt=P55265,A2IBT1 | |UniProt=P55265,A2IBT1 | ||
|association_with_transcript=79bp_to_ENST00000368474,uc001ffh.2,uc001ffi.2,uc001ffj.2,uc001ffn.1_5end | |association_with_transcript=79bp_to_ENST00000368474,uc001ffh.2,uc001ffi.2,uc001ffj.2,uc001ffn.1_5end | ||
|cluster_id=chr1:154580584..154580602,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_ADAR_5end | |description=CAGE_peak_3_at_ADAR_5end | ||
|id=chr1:154580584..154580602,- | |id=chr1:154580584..154580602,- | ||
|ontology_enrichment_celltype=CL:0000738!2.98e-38!140;CL:0002087!6.99e-31!119;CL:0002031!3.99e-29!124;CL:0000037!1.30e-26!172;CL:0000566!1.30e-26!172;CL:0000988!1.88e-25!182;CL:0002032!9.92e-25!165;CL:0000837!9.92e-25!165;CL:0002057!2.17e-21!42;CL:0000860!1.84e-20!45;CL:0000766!4.68e-20!76;CL:0002009!1.11e-16!65;CL:0002194!3.61e-16!63;CL:0000576!3.61e-16!63;CL:0000040!3.61e-16!63;CL:0000559!3.61e-16!63;CL:0000557!9.83e-16!71;CL:0000839!1.64e-15!70;CL:0000542!2.05e-13!53;CL:0000051!2.05e-13!53;CL:0000838!5.64e-13!52;CL:0000763!6.11e-12!112;CL:0000049!6.11e-12!112;CL:0000084!6.52e-08!25;CL:0000827!6.52e-08!25 | |ontology_enrichment_celltype=CL:0000738!2.98e-38!140;CL:0002087!6.99e-31!119;CL:0002031!3.99e-29!124;CL:0000037!1.30e-26!172;CL:0000566!1.30e-26!172;CL:0000988!1.88e-25!182;CL:0002032!9.92e-25!165;CL:0000837!9.92e-25!165;CL:0002057!2.17e-21!42;CL:0000860!1.84e-20!45;CL:0000766!4.68e-20!76;CL:0002009!1.11e-16!65;CL:0002194!3.61e-16!63;CL:0000576!3.61e-16!63;CL:0000040!3.61e-16!63;CL:0000559!3.61e-16!63;CL:0000557!9.83e-16!71;CL:0000839!1.64e-15!70;CL:0000542!2.05e-13!53;CL:0000051!2.05e-13!53;CL:0000838!5.64e-13!52;CL:0000763!6.11e-12!112;CL:0000049!6.11e-12!112;CL:0000084!6.52e-08!25;CL:0000827!6.52e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.63e-18;33!CL:0002057;3.63e-18;33!CL:0000473;3.75e-13;39!CL:0000234;3.75e-13;39!CL:0000576;3.28e-12;48!CL:0002087;4.29e-11;104!CL:0000766;1.00e-09;69!CL:0000738;9.97e-09;136!CL:0000084;4.64e-08;25!CL:0000542;4.96e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.36e-41,136;CL:0002087,2.18e-33,115;CL:0002031,4.26e-31,120;CL:0000037,3.57e-29,168;CL:0000988,7.44e-28,177;CL:0002032,2.24e-27,161;CL:0000837,2.24e-27,161;CL:0000860,2.55e-23,42;CL:0002057,2.55e-23,42;CL:0000766,2.34e-21,72;CL:0000473,1.24e-20,48;CL:0000234,1.24e-20,48;CL:0002009,1.16e-17,61;CL:0002194,4.17e-17,59;CL:0000576,4.17e-17,59;CL:0000040,4.17e-17,59;CL:0000559,4.17e-17,59;CL:0000557,7.39e-17,67;CL:0000839,4.81e-16,66;CL:0000542,8.68e-15,53;CL:0000051,8.68e-15,53;CL:0000838,2.65e-14,52;CL:0000763,4.45e-13,108;CL:0000049,4.45e-13,108;CL:0000084,1.57e-08,25;CL:0000827,1.57e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-17;42!CL:0000051;4.96e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.12e-25!112;UBERON:0002390!1.58e-22!102;UBERON:0003061!1.58e-22!102;UBERON:0002371!7.39e-14!80;UBERON:0002405!2.42e-13!115;UBERON:0001474!2.18e-12!86;UBERON:0004765!2.20e-09!101;UBERON:0001434!2.20e-09!101;UBERON:0000178!3.25e-08!15;UBERON:0000179!3.25e-08!15;UBERON:0000463!3.25e-08!15;UBERON:0003081!1.97e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.08e-09;15!UBERON:0000179;5.08e-09;15!UBERON:0000463;5.08e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.86e-27,108;UBERON:0002390,1.20e-24,98;UBERON:0003061,1.20e-24,98;UBERON:0002405,3.16e-20,93;UBERON:0002371,4.71e-15,76;UBERON:0001474,2.99e-13,82;UBERON:0004765,5.95e-11,90;UBERON:0001434,2.23e-09,100;UBERON:0003081,3.03e-09,203;UBERON:0000178,7.31e-09,15;UBERON:0000179,7.31e-09,15;UBERON:0000463,7.31e-09,15 | |||
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| ||
|short_description=p3@ADAR | |short_description=p3@ADAR | ||
}} | }} |
Latest revision as of 09:44, 17 September 2015
Short description: | p3@ADAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADAR_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 79bp_to_ENST00000368474, uc001ffh.2, uc001ffi.2, uc001ffj.2, uc001ffn.1_5end |
EntrezGene: | ADAR |
HGNC: | 225 |
UniProt: | P55265A2IBT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.36e-41 | 136 |
nongranular leukocyte | 2.18e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 4.26e-31 | 120 |
hematopoietic stem cell | 3.57e-29 | 168 |
hematopoietic cell | 7.44e-28 | 177 |
hematopoietic oligopotent progenitor cell | 2.24e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-27 | 161 |
classical monocyte | 2.55e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.55e-23 | 42 |
myeloid leukocyte | 2.34e-21 | 72 |
defensive cell | 1.24e-20 | 48 |
phagocyte | 1.24e-20 | 48 |
macrophage dendritic cell progenitor | 1.16e-17 | 61 |
monopoietic cell | 4.17e-17 | 59 |
monocyte | 4.17e-17 | 59 |
monoblast | 4.17e-17 | 59 |
promonocyte | 4.17e-17 | 59 |
granulocyte monocyte progenitor cell | 7.39e-17 | 67 |
myeloid lineage restricted progenitor cell | 4.81e-16 | 66 |
lymphocyte | 8.68e-15 | 53 |
common lymphoid progenitor | 8.68e-15 | 53 |
lymphoid lineage restricted progenitor cell | 2.65e-14 | 52 |
myeloid cell | 4.45e-13 | 108 |
common myeloid progenitor | 4.45e-13 | 108 |
T cell | 1.57e-08 | 25 |
pro-T cell | 1.57e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.86e-27 | 108 |
hematopoietic system | 1.20e-24 | 98 |
blood island | 1.20e-24 | 98 |
immune system | 3.16e-20 | 93 |
bone marrow | 4.71e-15 | 76 |
bone element | 2.99e-13 | 82 |
skeletal element | 5.95e-11 | 90 |
skeletal system | 2.23e-09 | 100 |
lateral plate mesoderm | 3.03e-09 | 203 |
blood | 7.31e-09 | 15 |
haemolymphatic fluid | 7.31e-09 | 15 |
organism substance | 7.31e-09 | 15 |