FFCP PHASE1:Hg19::chr12:133657477..133657529,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:133657477..133657529,+ to FFCP PHASE1:Hg19::chr12:133657477..133657529,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7699 | |EntrezGene=7699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12925 | |HGNC=12925 | ||
|TSSclassifier=strong | |||
|UniProt=F5H644,F5H3Z2,F5H0J9 | |UniProt=F5H644,F5H3Z2,F5H0J9 | ||
|association_with_transcript=0bp_to_ENST00000319849,ENST00000440550,ENST00000440984_5end | |||
|cluster_id=chr12:133657477..133657529,+ | |||
|description=CAGE_peak_1_at_ZNF140_5end | |||
|id=chr12:133657477..133657529,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.89e-12!140;CL:0002031!2.23e-11!124;CL:0002057!1.24e-09!42;CL:0002087!6.65e-09!119;CL:0002032!1.65e-08!165;CL:0000837!1.65e-08!165;CL:0000557!2.30e-08!71;CL:0000037!5.53e-08!172;CL:0000566!5.53e-08!172;CL:0000766!5.71e-08!76;CL:0000860!2.52e-07!45;CL:0000988!4.61e-07!182;CL:0000839!4.94e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.84e-10;33!CL:0002057;6.84e-10;33!CL:0000473;1.51e-07;39!CL:0000234;1.51e-07;39!CL:0000576;6.39e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.49e-14,136;CL:0002031,4.60e-13,120;CL:0002087,2.24e-10,115;CL:0000557,2.66e-10,67;CL:0000766,9.16e-10,72;CL:0002032,1.05e-09,161;CL:0000837,1.05e-09,161;CL:0000860,1.24e-09,42;CL:0002057,1.24e-09,42;CL:0000037,4.14e-09,168;CL:0000839,9.09e-09,66;CL:0000473,1.19e-08,48;CL:0000234,1.19e-08,48;CL:0000988,1.98e-08,177;CL:0002009,2.75e-08,61;CL:0002194,2.04e-07,59;CL:0000576,2.04e-07,59;CL:0000040,2.04e-07,59;CL:0000559,2.04e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;8.35e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-08!102;UBERON:0003061!1.90e-08!102;UBERON:0002193!2.06e-08!112;UBERON:0002371!2.62e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.25e-10,98;UBERON:0003061,5.25e-10,98;UBERON:0002193,7.02e-10,108;UBERON:0004765,5.37e-09,90;UBERON:0002371,6.04e-09,76;UBERON:0002405,7.87e-09,93;UBERON:0001474,4.63e-08,82;UBERON:0001434,3.42e-07,100 | |||
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| ||
|short_description=p1@ZNF140 | |||
}} | }} |
Latest revision as of 12:10, 17 September 2015
Short description: | p1@ZNF140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF140_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319849, ENST00000440550, ENST00000440984_5end |
EntrezGene: | ZNF140 |
HGNC: | 12925 |
UniProt: | F5H644F5H3Z2F5H0J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.49e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 4.60e-13 | 120 |
nongranular leukocyte | 2.24e-10 | 115 |
granulocyte monocyte progenitor cell | 2.66e-10 | 67 |
myeloid leukocyte | 9.16e-10 | 72 |
hematopoietic oligopotent progenitor cell | 1.05e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-09 | 161 |
classical monocyte | 1.24e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-09 | 42 |
hematopoietic stem cell | 4.14e-09 | 168 |
myeloid lineage restricted progenitor cell | 9.09e-09 | 66 |
defensive cell | 1.19e-08 | 48 |
phagocyte | 1.19e-08 | 48 |
hematopoietic cell | 1.98e-08 | 177 |
macrophage dendritic cell progenitor | 2.75e-08 | 61 |
monopoietic cell | 2.04e-07 | 59 |
monocyte | 2.04e-07 | 59 |
monoblast | 2.04e-07 | 59 |
promonocyte | 2.04e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.25e-10 | 98 |
blood island | 5.25e-10 | 98 |
hemolymphoid system | 7.02e-10 | 108 |
skeletal element | 5.37e-09 | 90 |
bone marrow | 6.04e-09 | 76 |
immune system | 7.87e-09 | 93 |
bone element | 4.63e-08 | 82 |
skeletal system | 3.42e-07 | 100 |