FFCP PHASE1:Hg19::chr1:31230687..31230701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7805 | |EntrezGene=7805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29612 | |HGNC=29612 | ||
|TSSclassifier=strong | |||
|UniProt=Q13571,Q5TBB8 | |UniProt=Q13571,Q5TBB8 | ||
|association_with_transcript=-4bp_to_NM_006762,uc001bsc.2_5end | |association_with_transcript=-4bp_to_NM_006762,uc001bsc.2_5end | ||
|cluster_id=chr1:31230687..31230701,- | |||
|coexpression_cluster_id=C3967 | |coexpression_cluster_id=C3967 | ||
|description=CAGE_peak_3_at_LAPTM5_5end | |description=CAGE_peak_3_at_LAPTM5_5end | ||
|id=chr1:31230687..31230701,- | |id=chr1:31230687..31230701,- | ||
|ontology_enrichment_celltype=CL:0000473;1.41e-22;39!CL:0000234;1.41e-22;39!CL:0000860;4.48e-22;33!CL:0002057;4.48e-22;33!CL:0000576;4.85e-20;48!CL:0000766;6.21e-20;69!CL:0002087;1.49e-18;104!CL:0000738;3.96e-18;136!CL:0000763;7.64e-17;100!CL:0000945;1.12e-16;24!CL:0000542;5.94e-16;53!CL:0000988;1.14e-15;177!CL:0000084;1.69e-10;25!CL:0000236;2.26e-09;13!CL:0000791;6.96e-09;18!CL:0000789;6.96e-09;18!CL:0002419;6.96e-09;18!CL:0000094;6.81e-08;8!CL:0000219;5.85e-07;193 | |ontology_enrichment_celltype=CL:0000037!3.93e-80!172;CL:0000566!3.93e-80!172;CL:0000988!4.51e-76!182;CL:0002032!6.06e-76!165;CL:0000837!6.06e-76!165;CL:0000738!1.26e-68!140;CL:0002031!6.32e-58!124;CL:0002087!3.38e-55!119;CL:0000763!1.49e-47!112;CL:0000049!1.49e-47!112;CL:0000766!5.54e-37!76;CL:0000557!4.82e-32!71;CL:0000839!8.17e-32!70;CL:0002009!1.19e-28!65;CL:0002194!5.73e-28!63;CL:0000576!5.73e-28!63;CL:0000040!5.73e-28!63;CL:0000559!5.73e-28!63;CL:0000542!9.44e-24!53;CL:0000051!9.44e-24!53;CL:0002057!1.86e-23!42;CL:0000838!2.54e-23!52;CL:0000860!8.98e-21!45;CL:0000945!2.55e-14!24;CL:0000826!2.55e-14!24;CL:0000134!3.26e-13!358;CL:0002320!7.15e-12!365;CL:0000084!2.61e-09!25;CL:0000827!2.61e-09!25;CL:0000236!8.82e-09!14;CL:0000219!2.22e-08!390;CL:0000791!1.04e-07!18;CL:0000789!1.04e-07!18;CL:0002420!1.04e-07!18;CL:0002419!1.04e-07!18;CL:0000790!1.04e-07!18;CL:0000094!7.26e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;1.41e-22;39!CL:0000234;1.41e-22;39!CL:0000860;4.48e-22;33!CL:0002057;4.48e-22;33!CL:0000576;4.85e-20;48!CL:0000766;6.21e-20;69!CL:0002087;1.49e-18;104!CL:0000738;3.96e-18;136!CL:0000763;7.64e-17;100!CL:0000945;1.12e-16;24!CL:0000542;5.94e-16;53!CL:0000988;1.14e-15;177!CL:0000084;1.69e-10;25!CL:0000236;2.26e-09;13!CL:0000791;6.96e-09;18!CL:0000789;6.96e-09;18!CL:0002419;6.96e-09;18!CL:0000094;6.81e-08;8!CL:0000219;5.85e-07;193 | ||
|ontology_enrichment_disease=DOID:8692;2.23e-11;31!DOID:1240;1.17e-10;39!DOID:2531;1.23e-10;51!DOID:0060083;1.23e-10;51!DOID:0060058;6.98e-07;10 | |ontology_enrichment_celltype_v019_2=CL:0000037,9.94e-99,168;CL:0000988,4.54e-94,177;CL:0002032,1.02e-93,161;CL:0000837,1.02e-93,161;CL:0000738,6.55e-86,136;CL:0002031,5.07e-73,120;CL:0002087,9.39e-70,115;CL:0000763,3.95e-60,108;CL:0000049,3.95e-60,108;CL:0000766,1.09e-48,72;CL:0000557,1.53e-42,67;CL:0000839,2.70e-42,66;CL:0002009,1.99e-38,61;CL:0002194,1.21e-37,59;CL:0000576,1.21e-37,59;CL:0000040,1.21e-37,59;CL:0000559,1.21e-37,59;CL:0000473,1.43e-32,48;CL:0000234,1.43e-32,48;CL:0000860,1.24e-27,42;CL:0002057,1.24e-27,42;CL:0000542,1.27e-27,53;CL:0000051,1.27e-27,53;CL:0000838,4.11e-27,52;CL:0000134,3.54e-18,354;CL:0000945,9.58e-17,24;CL:0000826,9.58e-17,24;CL:0002320,9.86e-17,361;CL:0000219,8.52e-13,386;CL:0000084,1.77e-10,25;CL:0000827,1.77e-10,25;CL:0000236,3.74e-10,14;CL:0000791,7.00e-09,18;CL:0000789,7.00e-09,18;CL:0002420,7.00e-09,18;CL:0002419,7.00e-09,18;CL:0000790,7.00e-09,18;CL:0000048,8.47e-09,427;CL:0000723,4.83e-08,433;CL:0000034,5.05e-08,441;CL:0000094,7.04e-08,8 | ||
|ontology_enrichment_uberon=UBERON:0000178;1.48e-08;15!UBERON:0000179;1.48e-08;15!UBERON:0000463;1.48e-08;15 | |ontology_enrichment_development_v019=CL:0002057;2.73e-20;42!CL:0000049;4.69e-16;108!CL:0000051;5.94e-16;53!CL:0000790;6.96e-09;18 | ||
|ontology_enrichment_disease=DOID:2531!7.08e-16!51;DOID:0060083!7.08e-16!51;DOID:1240!1.43e-12!39;DOID:8692!1.28e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.23e-11;31!DOID:1240;1.17e-10;39!DOID:2531;1.23e-10;51!DOID:0060083;1.23e-10;51!DOID:0060058;6.98e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.10e-18,51;DOID:0060083,5.10e-18,51;DOID:1240,6.73e-14,39;DOID:8692,7.38e-12,31;DOID:0060058,6.98e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-36!102;UBERON:0003061!1.10e-36!102;UBERON:0002193!1.10e-35!112;UBERON:0002371!8.68e-27!80;UBERON:0001474!1.13e-23!86;UBERON:0002405!1.16e-22!115;UBERON:0004765!1.20e-18!101;UBERON:0001434!1.20e-18!101;UBERON:0007023!4.09e-11!115;UBERON:0002384!5.55e-11!375;UBERON:0003081!1.78e-08!216;UBERON:0000178!1.90e-07!15;UBERON:0000179!1.90e-07!15;UBERON:0000463!1.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-08;15!UBERON:0000179;1.48e-08;15!UBERON:0000463;1.48e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.67e-48,98;UBERON:0003061,4.67e-48,98;UBERON:0002193,1.35e-46,108;UBERON:0002405,1.91e-38,93;UBERON:0002371,4.74e-36,76;UBERON:0001474,4.09e-31,82;UBERON:0004765,1.17e-25,90;UBERON:0001434,1.72e-21,100;UBERON:0002384,1.34e-15,371;UBERON:0003081,3.59e-13,203;UBERON:0000178,1.43e-08,15;UBERON:0000179,1.43e-08,15;UBERON:0000463,1.43e-08,15 | |||
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| ||
|short_description=p3@LAPTM5 | |short_description=p3@LAPTM5 | ||
}} | }} |
Latest revision as of 12:31, 17 September 2015
Short description: | p3@LAPTM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAPTM5_5end |
Coexpression cluster: | C3967_Neutrophils_CD19_Eosinophils_Macrophage_CD14_Monocytederived_Basophils |
Association with transcript: | -4bp_to_NM_006762, uc001bsc.2_5end |
EntrezGene: | LAPTM5 |
HGNC: | 29612 |
UniProt: | Q13571Q5TBB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.67e-48 | 98 |
blood island | 4.67e-48 | 98 |
hemolymphoid system | 1.35e-46 | 108 |
immune system | 1.91e-38 | 93 |
bone marrow | 4.74e-36 | 76 |
bone element | 4.09e-31 | 82 |
skeletal element | 1.17e-25 | 90 |
skeletal system | 1.72e-21 | 100 |
connective tissue | 1.34e-15 | 371 |
lateral plate mesoderm | 3.59e-13 | 203 |
blood | 1.43e-08 | 15 |
haemolymphatic fluid | 1.43e-08 | 15 |
organism substance | 1.43e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.10e-18 | 51 |
immune system cancer | 5.10e-18 | 51 |
leukemia | 6.73e-14 | 39 |
myeloid leukemia | 7.38e-12 | 31 |
lymphoma | 6.98e-07 | 10 |