FFCP PHASE1:Hg19::chr1:31230687..31230701,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:31230687..31230701,-
|short_description=p3@LAPTM5
|description=CAGE_peak_3_at_LAPTM5_5end
|association_with_transcript=-4bp_to_NM_006762,uc001bsc.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7805 | |EntrezGene=7805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29612 | |HGNC=29612 | ||
|TSSclassifier=strong | |||
|UniProt=Q13571,Q5TBB8 | |UniProt=Q13571,Q5TBB8 | ||
|association_with_transcript=-4bp_to_NM_006762,uc001bsc.2_5end | |||
|cluster_id=chr1:31230687..31230701,- | |||
|coexpression_cluster_id=C3967 | |||
|description=CAGE_peak_3_at_LAPTM5_5end | |||
|id=chr1:31230687..31230701,- | |||
|ontology_enrichment_celltype=CL:0000037!3.93e-80!172;CL:0000566!3.93e-80!172;CL:0000988!4.51e-76!182;CL:0002032!6.06e-76!165;CL:0000837!6.06e-76!165;CL:0000738!1.26e-68!140;CL:0002031!6.32e-58!124;CL:0002087!3.38e-55!119;CL:0000763!1.49e-47!112;CL:0000049!1.49e-47!112;CL:0000766!5.54e-37!76;CL:0000557!4.82e-32!71;CL:0000839!8.17e-32!70;CL:0002009!1.19e-28!65;CL:0002194!5.73e-28!63;CL:0000576!5.73e-28!63;CL:0000040!5.73e-28!63;CL:0000559!5.73e-28!63;CL:0000542!9.44e-24!53;CL:0000051!9.44e-24!53;CL:0002057!1.86e-23!42;CL:0000838!2.54e-23!52;CL:0000860!8.98e-21!45;CL:0000945!2.55e-14!24;CL:0000826!2.55e-14!24;CL:0000134!3.26e-13!358;CL:0002320!7.15e-12!365;CL:0000084!2.61e-09!25;CL:0000827!2.61e-09!25;CL:0000236!8.82e-09!14;CL:0000219!2.22e-08!390;CL:0000791!1.04e-07!18;CL:0000789!1.04e-07!18;CL:0002420!1.04e-07!18;CL:0002419!1.04e-07!18;CL:0000790!1.04e-07!18;CL:0000094!7.26e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.41e-22;39!CL:0000234;1.41e-22;39!CL:0000860;4.48e-22;33!CL:0002057;4.48e-22;33!CL:0000576;4.85e-20;48!CL:0000766;6.21e-20;69!CL:0002087;1.49e-18;104!CL:0000738;3.96e-18;136!CL:0000763;7.64e-17;100!CL:0000945;1.12e-16;24!CL:0000542;5.94e-16;53!CL:0000988;1.14e-15;177!CL:0000084;1.69e-10;25!CL:0000236;2.26e-09;13!CL:0000791;6.96e-09;18!CL:0000789;6.96e-09;18!CL:0002419;6.96e-09;18!CL:0000094;6.81e-08;8!CL:0000219;5.85e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.94e-99,168;CL:0000988,4.54e-94,177;CL:0002032,1.02e-93,161;CL:0000837,1.02e-93,161;CL:0000738,6.55e-86,136;CL:0002031,5.07e-73,120;CL:0002087,9.39e-70,115;CL:0000763,3.95e-60,108;CL:0000049,3.95e-60,108;CL:0000766,1.09e-48,72;CL:0000557,1.53e-42,67;CL:0000839,2.70e-42,66;CL:0002009,1.99e-38,61;CL:0002194,1.21e-37,59;CL:0000576,1.21e-37,59;CL:0000040,1.21e-37,59;CL:0000559,1.21e-37,59;CL:0000473,1.43e-32,48;CL:0000234,1.43e-32,48;CL:0000860,1.24e-27,42;CL:0002057,1.24e-27,42;CL:0000542,1.27e-27,53;CL:0000051,1.27e-27,53;CL:0000838,4.11e-27,52;CL:0000134,3.54e-18,354;CL:0000945,9.58e-17,24;CL:0000826,9.58e-17,24;CL:0002320,9.86e-17,361;CL:0000219,8.52e-13,386;CL:0000084,1.77e-10,25;CL:0000827,1.77e-10,25;CL:0000236,3.74e-10,14;CL:0000791,7.00e-09,18;CL:0000789,7.00e-09,18;CL:0002420,7.00e-09,18;CL:0002419,7.00e-09,18;CL:0000790,7.00e-09,18;CL:0000048,8.47e-09,427;CL:0000723,4.83e-08,433;CL:0000034,5.05e-08,441;CL:0000094,7.04e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-20;42!CL:0000049;4.69e-16;108!CL:0000051;5.94e-16;53!CL:0000790;6.96e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!7.08e-16!51;DOID:0060083!7.08e-16!51;DOID:1240!1.43e-12!39;DOID:8692!1.28e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.23e-11;31!DOID:1240;1.17e-10;39!DOID:2531;1.23e-10;51!DOID:0060083;1.23e-10;51!DOID:0060058;6.98e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.10e-18,51;DOID:0060083,5.10e-18,51;DOID:1240,6.73e-14,39;DOID:8692,7.38e-12,31;DOID:0060058,6.98e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-36!102;UBERON:0003061!1.10e-36!102;UBERON:0002193!1.10e-35!112;UBERON:0002371!8.68e-27!80;UBERON:0001474!1.13e-23!86;UBERON:0002405!1.16e-22!115;UBERON:0004765!1.20e-18!101;UBERON:0001434!1.20e-18!101;UBERON:0007023!4.09e-11!115;UBERON:0002384!5.55e-11!375;UBERON:0003081!1.78e-08!216;UBERON:0000178!1.90e-07!15;UBERON:0000179!1.90e-07!15;UBERON:0000463!1.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-08;15!UBERON:0000179;1.48e-08;15!UBERON:0000463;1.48e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.67e-48,98;UBERON:0003061,4.67e-48,98;UBERON:0002193,1.35e-46,108;UBERON:0002405,1.91e-38,93;UBERON:0002371,4.74e-36,76;UBERON:0001474,4.09e-31,82;UBERON:0004765,1.17e-25,90;UBERON:0001434,1.72e-21,100;UBERON:0002384,1.34e-15,371;UBERON:0003081,3.59e-13,203;UBERON:0000178,1.43e-08,15;UBERON:0000179,1.43e-08,15;UBERON:0000463,1.43e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,1.34465029290355,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,74.8087242272443,79.9659741242472,75.8771931863868,54.2842702051488,38.3829398097213,45.5159402549263,0,0,0.369754010166788,14.9511697119982,8.10364625178303,4.9912074686924,41.5496556398908,47.5290340504236,34.2877175731046,20.824139104313,24.2920249514235,17.5151385991247,35.0409755458751,45.7229891863459,31.5359279544161,45.5560912335142,46.8731392344881,30.3512243477202,50.9215534410206,41.4980344577143,32.8710299545133,47.2301582609167,38.7290810150296,23.0225027210381,48.9430082810772,43.6649840092553,31.910734791202,62.747197936035,59.3718700090773,36.4422161705454,41.5612638235262,33.1109671651909,25.9997097824943,67.0383341232029,55.0363667950406,37.9921571887301,38.189797119025,38.5897359630949,34.0986486187033,51.4589577238363,54.8733677621471,32.2791635189702,12.0415513197807,4.46469029926591,9.01532175686016,14.7150506801909,6.75796017786778,17.3583633632847,3.42015292489498,2.98375015798635,5.47992461293902,26.3994366691984,25.6685147293202,24.9062591081795,20.9097809057589,29.6293030406649,22.4153451582248,20.4923910563307,20.989182599778,113.27338085278,55.7875329902392,158.261116443845,6.60856642895129,14.0127140745384,8.95505888235262,11.0157471263747,12.5763444079733,19.5321424049534,8.02495177875255,7.17028986593899,3.31413464014313,7.79306913631645,20.9451658944126,7.9543595018206,3.54454231333794,17.331447280961,14.8585930881783,33.8154303655683,10.1951500854279,24.3188015651547,16.2289728011629,9.34205347920981,3.47803076516627,10.4535523804977,15.9766173203568,7.66440987203842,5.84166657320471,12.9040042929946,11.4683549156675,18.2303367079797,9.50452044448374,13.250610478844,11.7747682262065,23.7368380449457,16.1008531389931,9.03240796613151,17.7413934037765,12.8371293976084,12.4548987339207,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0.221729397462564,0.351339142772504,2.35762335895883,0,0,16.5519170763889,17.9353629418245,30.1814570377824,30.5267999110838,18.8758320557442,34.17409012232,0.79504962946682,0,1.04142150482278,0,0,1.10047216776027,1.67195973229448,0,0.35576626268671,1.00416183829401,2.01414658554573,1.52054421143703,3.41686880567437,1.83831540172934,1.62028389576352,0.892997282840798,1.12264686313085,0.788280363383256,1.53316637465883,0,2.01521918323448,89.610683856523,62.0448422637321,0.436094052142534,0,0,0,0,1.06400514659507,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0.816616685019573,0,0.929932030581889,1.18800285728205,0,0,0,0,0,2.49357703935765,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0.201504196455281,0,0.386521706326594,3.00020732649918,0.286804595389004,0,0,0,0,0,0,0,0,5.52539685409922,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,7.50487269004906,0,0,0,0,0,0.277765335475589,0,2.07986957055916,0,0,0,6.20775725372617,3.24089858803628,2.09279567458058,0,0,41.1182400165954,128.468341561441,95.718468513941,0.93733833986777,0.671928512795438,0.141775097242386,0.53735113621709,1.16253575405585,0,51.2369767411781,48.9549293113537,62.4057627777724,68.0246180128058,50.1182460702728,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0.532844358032199,0,0.542621605391443,0,0,0,0,0,0,0,31.6221829667095,73.3295353490905,65.3585212397398,0,0,0,0.868687840005475,3.49309748335652,3.04403637507822,11.8810252633139,24.234783504837,14.2314199407281,16.299565607528,0,0,0,1.00509759200609,0,47.9364495326197,53.8490626567245,72.5227148513062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.2595393176067,32.3571301227925,30.8442642051954,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0.451199612907412,0,0,0,0.422206515571503,2.27466768141793,1.53084334748864,0.431831832204279,0,0,0.501689773854853,0.509752546090077,0,0.223874754722178,6.13927654608617,3.39866086332371,0,0,0,5.77029665227245,0.27470839445503,0.165018999841176,1.72279661398852,0,0,0,0.308097234229289,0,0.137836572484531,0,0.290033387828457,0.852266274161009,0.445160178233687,0.165284915360978,0.384380134730212,0.255225424989168,0.30347334256665,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0.422215270595328,0,0,0,0.769776901804097,0,0,5.36619664427641,1.29151611801369,0,1.7737206141467,5.05391480455311,17.2532187138938,22.1744790071289,24.494829048489,14.2939065274673,19.3340268350511,16.2118327798179,12.9607544937148,18.2418790547682,0,0,0.245040215981032,17.2796952866918,8.07907592668091,0.0711418433484141,14.8266433637805,0.997896857164083,9.1922577663536,7.62024897805978,1.94773164164733,6.17753791849609,5.70586697582981,9.24411385060837,0,6.43308755646092,7.38705145477018,5.04499267977619,14.4787720814711,16.4882565482767,38.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| ||
|short_description=p3@LAPTM5 | |||
}} | }} |
Latest revision as of 12:31, 17 September 2015
Short description: | p3@LAPTM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAPTM5_5end |
Coexpression cluster: | C3967_Neutrophils_CD19_Eosinophils_Macrophage_CD14_Monocytederived_Basophils |
Association with transcript: | -4bp_to_NM_006762, uc001bsc.2_5end |
EntrezGene: | LAPTM5 |
HGNC: | 29612 |
UniProt: | Q13571Q5TBB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.67e-48 | 98 |
blood island | 4.67e-48 | 98 |
hemolymphoid system | 1.35e-46 | 108 |
immune system | 1.91e-38 | 93 |
bone marrow | 4.74e-36 | 76 |
bone element | 4.09e-31 | 82 |
skeletal element | 1.17e-25 | 90 |
skeletal system | 1.72e-21 | 100 |
connective tissue | 1.34e-15 | 371 |
lateral plate mesoderm | 3.59e-13 | 203 |
blood | 1.43e-08 | 15 |
haemolymphatic fluid | 1.43e-08 | 15 |
organism substance | 1.43e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.10e-18 | 51 |
immune system cancer | 5.10e-18 | 51 |
leukemia | 6.73e-14 | 39 |
myeloid leukemia | 7.38e-12 | 31 |
lymphoma | 6.98e-07 | 10 |